Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_009029 Daucus carota HOM05D005269 ORTHO05D006429 8.1e-67 256.9 127 100.0
PGSC0003DMG400029616 Solanum tuberosum HOM05D005269 ORTHO05D006429 2.6e-41 172.2 127 67.7
Solyc09g091450.3 Solanum lycopersicum HOM05D005269 ORTHO05D006429 3.4e-41 171.8 127 67.7
Sopen09g034380 Solanum pennellii HOM05D005269 ORTHO05D006429 9.9e-41 170.2 127 66.9
Cc11_g00500 Coffea canephora HOM05D005269 ORTHO05D006429 1.3e-40 169.9 126 64.3
Dinv17239 Davidia involucrata HOM05D005269 ORTHO05D006429 1.4e-39 166.4 131 62.6
CAN.G500.91 Capsicum annuum HOM05D005269 ORTHO05D006429 2.7e-38 162.2 127 66.9
COL.COLO4_12968 Corchorus olitorius HOM05D005269 ORTHO05D006429 1.3e-37 159.8 128 64.1
Lj7A504G56 Lonicera japonica HOM05D005269 ORTHO05D006429 1.3e-37 159.8 127 63.8
Ciclev10033086m.g Citrus clementina HOM05D005269 ORTHO05D006429 1.8e-37 159.5 126 64.3
Duzib128G1401 Durio zibethinus HOM05D005269 ORTHO05D006429 6.7e-37 157.5 128 62.5
Thecc.05G226600 Theobroma cacao HOM05D005269 ORTHO05D006429 8.7e-37 157.1 128 64.8
Peaxi162Scf00047g01229 Petunia axillaris HOM05D005269 ORTHO05D006429 1.1e-36 156.8 126 66.7
Gohir.D11G234500 Gossypium hirsutum HOM05D005269 ORTHO05D006429 9.6e-36 153.7 126 61.1
Ah.04g159550 Amaranthus hybridus HOM05D005269 ORTHO05D006429 1.6e-35 152.9 126 61.1
Gorai.007G246800 Gossypium raimondii HOM05D005269 ORTHO05D006429 1.6e-35 152.9 126 61.9
Sabra19G0053500 Salix brachista HOM05D005269 ORTHO05D006429 4.8e-35 151.4 126 61.1
Actinidia33802 Actinidia chinensis HOM05D005269 ORTHO05D006429 6.2e-35 151.0 124 62.1
CiPaw.05G211300 Carya illinoinensis HOM05D005269 ORTHO05D006429 6.2e-35 151.0 128 60.2
MSTRG.4345 Avicennia marina HOM05D005269 ORTHO05D006429 8.1e-35 150.6 123 63.4
Gohir.A11G225900 Gossypium hirsutum HOM05D005269 ORTHO05D006429 8.1e-35 150.6 126 61.1
HanXRQChr17g0540921 Helianthus annuus HOM05D005269 ORTHO05D006429 8.1e-35 150.6 129 60.5
Gohir.A13G001000 Gossypium hirsutum HOM05D005269 ORTHO05D006429 1.1e-34 150.2 126 59.5
Eucgr.I00374 Eucalyptus grandis HOM05D005269 ORTHO05D006429 4.0e-34 148.3 125 60.0
Haze_00354 Corylus avellana HOM05D005269 ORTHO05D006429 5.3e-34 147.9 130 59.2
EL10Ac4g10063 Beta vulgaris HOM05D005269 ORTHO05D006429 6.9e-34 147.5 122 61.5
PGR004G2648 Punica granatum HOM05D005269 ORTHO05D006429 6.9e-34 147.5 130 61.5
PGSC0003DMG400019109 Solanum tuberosum HOM05D005269 ORTHO05D006429 9.0e-34 147.1 134 56.0
Lsat_1_v5_gn_9_46181 Lactuca sativa HOM05D005269 ORTHO05D006429 2.0e-33 146.0 131 58.8
MELO3C005384.2 Cucumis melo HOM05D005269 ORTHO05D006429 2.6e-33 145.6 126 58.7
Nitab4.5_0001769g0050 Nicotiana tabacum HOM05D005269 ORTHO05D006429 2.6e-33 145.6 130 60.0
Oeu034712.1 Olea europaea HOM05D005269 ORTHO05D006429 2.6e-33 145.6 128 57.8
Cpa.g.sc43.150 Carica papaya HOM05D005269 ORTHO05D006429 3.4e-33 145.2 127 57.5
AUR62000236 Chenopodium quinoa HOM05D005269 ORTHO05D006429 3.4e-33 145.2 128 60.9
Peaxi162Scf00536g00089 Petunia axillaris HOM05D005269 ORTHO05D006429 4.5e-33 144.8 124 62.1
Potri.019G042900 Populus trichocarpa HOM05D005269 ORTHO05D006429 7.6e-33 144.1 126 58.7
THA.LOC104820303 Tarenaya hassleriana HOM05D005269 ORTHO05D006429 7.6e-33 144.1 124 60.5
TWI32G0228 Tripterygium wilfordii HOM05D005269 ORTHO05D006429 1.7e-32 142.9 145 54.5
Manes.09G130300 Manihot esculenta HOM05D005269 ORTHO05D006429 2.2e-32 142.5 127 56.7
Psat7g094200 Pisum sativum HOM05D005269 ORTHO05D006429 2.9e-32 142.1 126 57.1
Rhsim09G0214100 Rhododendron simsii HOM05D005269 ORTHO05D006429 2.9e-32 142.1 140 54.3
RcHm_v2.0_Chr2g0117101 Rosa chinensis HOM05D005269 ORTHO05D006429 6.4e-32 141.0 129 56.6
Thecc.05G226200 Theobroma cacao HOM05D005269 ORTHO05D006429 6.4e-32 141.0 128 59.4
CsaV3_5G005690 Cucumis sativus L. HOM05D005269 ORTHO05D006429 8.4e-32 140.6 126 57.1
ECA232G2798 Erigeron canadensis HOM05D005251 ORTHO05D006680 8.4e-32 140.6 124 56.5
MD07G1311000 Malus domestica HOM05D005269 ORTHO05D006429 8.4e-32 140.6 128 57.0
Nitab4.5_0001066g0040 Nicotiana tabacum HOM05D005269 ORTHO05D006429 8.4e-32 140.6 132 59.1
Hma1.2p1_0419F.1_g149570 Hydrangea macrophylla HOM05D005269 ORTHO05D006429 1.9e-31 139.4 123 58.5
Cfa016104 Carpinus fangiana HOM05D005269 ORTHO05D006429 2.4e-31 139.0 139 54.0
arahy.Tifrunner.gnm1.ann1.UWAC6K Arachis hypogaea HOM05D005269 ORTHO05D006429 3.2e-31 138.7 126 56.3
A06p06530 Brassica napus HOM05D005269 ORTHO05D006429 3.2e-31 138.7 128 57.0
Sopen05g032040 Solanum pennellii HOM05D005269 ORTHO05D006429 4.2e-31 138.3 132 54.5
Eucgr.L00611 Eucalyptus grandis HOM05D005269 ORTHO05D006429 5.5e-31 137.9 125 57.6
TAR374G1160 Trochodendron aralioides HOM05D005269 ORTHO05D006429 5.5e-31 137.9 132 58.3
BraA06t23864Z Brassica rapa HOM05D005269 ORTHO05D006429 7.1e-31 137.5 128 56.2
AUR62006583 Chenopodium quinoa HOM05D005269 ORTHO05D006429 7.1e-31 137.5 128 58.6
FvH4_1g22780 Fragaria vesca HOM05D005269 ORTHO05D006429 7.1e-31 137.5 127 57.5
Potri.013G076400 Populus trichocarpa HOM05D005269 ORTHO05D006429 7.1e-31 137.5 127 57.5
Sc16g0010860 Simmondsia chinensis HOM05D005269 ORTHO05D006429 7.1e-31 137.5 122 58.2
Sp1g08440 Schrenkiella parvula HOM05D005269 ORTHO05D006429 9.3e-31 137.1 128 55.5
AL1G20410 Arabidopsis lyrata HOM05D005269 ORTHO05D006429 1.2e-30 136.7 124 56.5
CARHR009820 Cardamine hirsuta HOM05D005269 ORTHO05D006429 1.2e-30 136.7 128 53.9
Psat7g094160 Pisum sativum HOM05D005269 ORTHO05D006429 1.6e-30 136.3 125 56.8
Solyc05g053520.3 Solanum lycopersicum HOM05D005269 ORTHO05D006429 2.7e-30 135.6 132 53.0
Thecc.05G226400 Theobroma cacao HOM05D005269 ORTHO05D006429 2.7e-30 135.6 129 58.1
Thhalv10009118m.g Eutrema salsugineum HOM05D005269 ORTHO05D006429 3.5e-30 135.2 128 55.5
Prupe.2G330200 Prunus persica HOM05D005269 ORTHO05D006429 3.5e-30 135.2 125 57.6
BcaC05g24843 Brassica carinata HOM05D005269 ORTHO05D006429 4.6e-30 134.8 128 55.5
BolC5t29544H Brassica oleracea HOM05D005269 ORTHO05D006429 4.6e-30 134.8 128 55.5
FAN26G3478 Fragaria x ananassa HOM05D005269 ORTHO05D006429 4.6e-30 134.8 127 56.7
Glyma.05G124300 Glycine max HOM05D005269 ORTHO05D006429 6.0e-30 134.4 126 57.1
SGA_v2.0_scaffold18G08210 Striga asiatica HOM05D005269 ORTHO05D006429 6.0e-30 134.4 124 58.9
ClCG01G005450 Citrullus lanatus HOM05D005269 ORTHO05D006429 1.0e-29 133.7 129 55.8
FAN19G2412 Fragaria x ananassa HOM05D005269 ORTHO05D006429 1.0e-29 133.7 127 56.7
Atru.chr12.1824 Acer truncatum HOM05D005269 ORTHO05D006429 1.3e-29 133.3 126 54.8
Aa31LG1G5120 Aethionema arabicum HOM05D005269 ORTHO05D006429 1.8e-29 132.9 128 52.3
AT1G09815 Arabidopsis thaliana HOM05D005269 ORTHO05D006429 2.3e-29 132.5 128 53.1
GSVIVG01024265001 Vitis vinifera HOM05D005269 ORTHO05D006429 3.0e-29 132.1 124 57.3
arahy.Tifrunner.gnm1.ann1.FKKB7G Arachis hypogaea HOM05D005269 ORTHO05D006429 3.9e-29 131.7 126 54.0
Sabra13G0065600 Salix brachista HOM05D005269 ORTHO05D006429 3.9e-29 131.7 126 55.6
Hund07408 Selenicereus undatus HOM05D005269 ORTHO05D006429 3.9e-29 131.7 130 55.4
Aqoxy6G02173 Aquilegia oxysepala HOM05D005269 ORTHO05D006429 6.7e-29 131.0 91 68.1
vmacro22190 Vaccinium macrocarpon HOM05D005269 ORTHO05D006429 6.7e-29 131.0 124 55.6
FAN23G2200 Fragaria x ananassa HOM05D005269 ORTHO05D006429 1.5e-28 129.8 121 57.9
unitig_52.g17685 Utricularia gibba HOM05D005269 ORTHO05D006429 1.5e-28 129.8 123 54.5
Phvul.002G201200 Phaseolus vulgaris HOM05D005269 ORTHO05D006429 1.9e-28 129.4 126 53.2
Carub.0001s0919 Capsella rubella HOM05D005269 ORTHO05D006429 3.3e-28 128.6 128 52.3
Ca_18303_v3 Cicer arietinum L. HOM05D005269 ORTHO05D006429 3.3e-28 128.6 119 55.5
ATR0568G075 Amborella trichopoda HOM05D005269 ORTHO05D006429 4.3e-28 128.3 122 54.1
FAN28G1075 Fragaria x ananassa HOM05D005269 ORTHO05D006429 5.6e-28 127.9 127 53.5
Migut.H00004 Erythranthe guttata HOM05D005269 ORTHO05D006429 7.4e-28 127.5 128 57.0
PSO063G4725 Papaver somniferum HOM05D005269 ORTHO05D006429 7.4e-28 127.5 127 54.3
MBI04_g30790_MAGBIO Magnolia biondii HOM05D005269 ORTHO05D006429 9.6e-28 127.1 125 53.6
PSO782G4777 Papaver somniferum HOM05D005269 ORTHO05D006429 9.6e-28 127.1 127 53.5
Ah.06g194960 Amaranthus hybridus HOM05D005269 ORTHO05D006429 1.6e-27 126.3 122 54.9
CAN.G17.24 Capsicum annuum HOM05D005269 ORTHO05D006429 1.6e-27 126.3 127 52.0
CSS0034044 Camellia sinensis var. sinensis HOM05D005269 ORTHO05D006429 2.8e-27 125.6 123 54.5
TAR629G0465 Trochodendron aralioides HOM05D005269 ORTHO05D006429 3.7e-27 125.2 126 55.6
Sed0009591 Sechium edule HOM05D005269 ORTHO05D006429 6.2e-27 124.4 128 52.3
Nn1g09278 Nelumbo nucifera HOM05D005269 ORTHO05D006429 8.2e-27 124.0 121 52.1
Phvul.002G201100 Phaseolus vulgaris HOM05D005269 ORTHO05D006429 1.8e-26 122.9 122 56.6
Lj4g0020860 Lotus japonicus HOM05D005269 ORTHO05D006429 3.4e-25 118.6 121 57.0
Medtr4g094465 Medicago truncatula HOM05D005269 ORTHO05D006429 8.4e-24 114.0 126 52.4
Sed0022400 Sechium edule HOM05D005269 ORTHO05D006429 1.1e-23 113.6 127 52.0
VMungo0251G2623 Vigna mungo HOM05D005269 ORTHO05D006429 4.2e-23 111.7 126 52.4
CDE02G3654 Ceratophyllum demersum HOM05D005269 ORTHO05D006429 5.5e-23 111.3 125 47.2
Gorai.013G185000 Gossypium raimondii HOM05D005269 ORTHO05D006429 5.5e-23 111.3 125 48.8
CANSAT78G2182 Cannabis sativa HOM05D005269 ORTHO05D006429 1.6e-22 109.8 121 48.8
CDE11G1263 Ceratophyllum demersum HOM05D005269 ORTHO05D006429 3.5e-22 108.6 125 45.6
Glyma.08G079500 Glycine max HOM05D005269 ORTHO05D006429 4.3e-20 101.7 111 48.6
Mapoly0002s0066 Marchantia polymorpha HOM05D005269 ORTHO05D006429 4.3e-20 101.7 130 43.8
TPR.G23807 Trifolium pratense HOM05D005269 ORTHO05D006429 4.3e-20 101.7 126 43.7
Gohir.D13G162800 Gossypium hirsutum HOM05D005269 ORTHO05D006429 5.7e-20 101.3 123 48.8
Zm00001eb318480 Zea mays HOM05D005269 ORTHO05D006429 1.3e-19 100.1 138 43.5
SEGI_20967 Sequoiadendron giganteum HOM05D005269 ORTHO05D006429 2.2e-19 99.4 148 43.9
C05p07920 Brassica napus HOM05D005269 ORTHO05D006429 2.8e-19 99.0 65 66.2
Lalb_Chr07g0189121 Lupinus albus HOM05D005269 ORTHO05D006429 2.8e-19 99.0 130 46.2
Pp3c4_21450 Physcomitrium patens HOM05D005269 ORTHO05D006429 5.3e-18 94.7 126 46.8
Gohir.A13G157700 Gossypium hirsutum HOM05D005269 ORTHO05D006429 3.4e-17 92.0 118 42.4
HPP92_001933 Vanilla planifolia HOM05D005269 ORTHO05D006429 1.0e-16 90.5 138 41.3
Actinidia04559 Actinidia chinensis HOM05D005269 ORTHO05D006429 8.5e-16 87.4 92 52.2
Os09g0520100 Oryza sativa ssp. japonica HOM05D005269 ORTHO05D006429 1.9e-15 86.3 98 45.9
Phvul.006G123900 Phaseolus vulgaris HOM05D005269 ORTHO05D006429 6.1e-14 81.3 65 50.8
TPR.G31897 Trifolium pratense HOM05D005269 ORTHO05D006429 7.9e-14 80.9 64 59.4
Medtr4g094458 Medicago truncatula HOM05D005269 ORTHO05D006429 5.1e-13 78.2 74 52.7
AUR62032913 Chenopodium quinoa HOM05D005269 ORTHO05D006429 1.5e-12 76.6 56 60.7
Nitab4.5_0011997g0010 Nicotiana tabacum HOM05D005269 ORTHO05D006429 1.9e-12 76.3 128 41.4
Glyma.15G135000 Glycine max HOM05D005269 ORTHO05D006429 2.5e-12 75.9 116 37.1
SMO134G0019 Selaginella moellendorffii HOM05D001491 ORTHO05D001443 9.7e-12 73.9 122 40.2
Nitab4.5_0002284g0060 Nicotiana tabacum HOM05D005269 ORTHO05D006429 1.3e-11 73.6 128 40.6
Medtr1g105865 Medicago truncatula HOM05D005269 ORTHO05D006429 1.7e-11 73.2 62 53.2
CDE02G2358 Ceratophyllum demersum HOM05D005269 ORTHO05D006429 8.2e-11 70.9 45 64.4
PRCOL_00003345 Prasinoderma coloniale HOM05D005269 ORTHO05D006429 8.2e-11 70.9 60 51.7
AagrBONN_evm.TU.Sc2ySwM_344.2125 Anthoceros agrestis HOM05D005269 ORTHO05D006429 2.4e-10 69.3 78 46.2
Os08g0163300 Oryza sativa ssp. japonica HOM05D005269 ORTHO05D006429 3.1e-10 68.9 155 32.3
Cre06.g292950 Chlamydomonas reinhardtii HOM05D005269 ORTHO05D006429 5.3e-10 68.2 140 35.0
Mapoly0080s0095 Marchantia polymorpha HOM05D005269 ORTHO05D006429 4.5e-09 65.1 68 45.6
SEGI_08095 Sequoiadendron giganteum HOM05D005269 ORTHO05D006429 1.3e-08 63.5 130 29.2
SEGI_01057 Sequoiadendron giganteum HOM05D005269 ORTHO05D006429 2.2e-08 62.8 61 41.0
MCO11G533 Micromonas commoda HOM05D005269 ORTHO05D006429 1.1e-07 60.5 75 40.0
Phvul.006G123800 Phaseolus vulgaris HOM05D005269 ORTHO05D006429 3.2e-07 58.9 37 62.2
Medtr5g006580 Medicago truncatula HOM05D004187 ORTHO05D004890 7.2e-07 57.8 49 51.0
Zm00001eb415390 Zea mays HOM05D005269 ORTHO05D006429 1.2e-06 57.0 59 45.8


User provided reference genes

Program Settings