Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_009010 Daucus carota HOM05D006678 ORTHO05D008388 2.5e-65 251.9 122 100.0
Lsat_1_v5_gn_9_47480 Lactuca sativa HOM05D006678 ORTHO05D008388 1.1e-44 183.3 122 75.4
HanXRQChr03g0088421 Helianthus annuus HOM05D006678 ORTHO05D008388 3.2e-44 181.8 113 78.8
Actinidia18705 Actinidia chinensis HOM05D006678 ORTHO05D008388 5.4e-44 181.0 120 71.7
Peaxi162Scf00133g00723 Petunia axillaris HOM05D006678 ORTHO05D008388 1.0e-42 176.8 119 73.1
Nitab4.5_0000021g0500 Nicotiana tabacum HOM05D006678 ORTHO05D008388 1.7e-42 176.0 120 73.3
Dinv17257 Davidia involucrata HOM05D006678 ORTHO05D008388 1.1e-41 173.3 120 70.8
Nitab4.5_0011186g0030 Nicotiana tabacum HOM05D006678 ORTHO05D008388 1.9e-41 172.6 120 73.3
MSTRG.26930 Avicennia marina HOM05D006678 ORTHO05D008388 4.3e-41 171.4 119 70.6
CSS0031072 Camellia sinensis var. sinensis HOM05D006678 ORTHO05D008388 5.6e-41 171.0 121 69.4
Actinidia34306 Actinidia chinensis HOM05D006678 ORTHO05D008388 7.3e-41 170.6 120 71.7
Aa31LG5G13550 Aethionema arabicum HOM05D006678 ORTHO05D008388 9.5e-41 170.2 113 74.3
Carub.0003s0222 Capsella rubella HOM05D006678 ORTHO05D008388 9.5e-41 170.2 113 73.5
Thhalv10021803m.g Eutrema salsugineum HOM05D006678 ORTHO05D008388 9.5e-41 170.2 113 74.3
Oeu031704.1 Olea europaea HOM05D006678 ORTHO05D008388 1.2e-40 169.9 124 69.4
Sp3g02110 Schrenkiella parvula HOM05D006678 ORTHO05D008388 1.2e-40 169.9 113 74.3
unitig_90.g27534 Utricularia gibba HOM05D006678 ORTHO05D008388 2.8e-40 168.7 119 69.7
AL3G12580 Arabidopsis lyrata HOM05D006678 ORTHO05D008388 3.6e-40 168.3 113 73.5
CARHR077080 Cardamine hirsuta HOM05D006678 ORTHO05D008388 4.7e-40 167.9 113 73.5
Migut.F00948 Erythranthe guttata HOM05D006678 ORTHO05D008388 8.1e-40 167.2 119 68.9
Dinv29159 Davidia involucrata HOM05D006678 ORTHO05D008388 1.8e-39 166.0 120 67.5
C05p63740 Brassica napus HOM05D006678 ORTHO05D008388 2.3e-39 165.6 117 70.1
SalBow2G2234 Salvia bowleyana HOM05D006678 ORTHO05D008388 2.3e-39 165.6 118 67.8
Atru.chr12.1964 Acer truncatum HOM05D006678 ORTHO05D008388 4.0e-39 164.9 113 71.7
AT3G03070 Arabidopsis thaliana HOM05D006678 ORTHO05D008388 4.0e-39 164.9 113 71.7
CSS0016806 Camellia sinensis var. sinensis HOM05D006678 ORTHO05D008388 4.0e-39 164.9 131 64.1
vmacro06510 Vaccinium macrocarpon HOM05D006678 ORTHO05D008388 4.0e-39 164.9 128 66.4
BolC5t35043H Brassica oleracea HOM05D006678 ORTHO05D008388 5.2e-39 164.5 113 72.6
BcaB04g21385 Brassica carinata HOM05D006678 ORTHO05D008388 6.8e-39 164.1 113 72.6
Solyc03g097010.3 Solanum lycopersicum HOM05D006678 ORTHO05D008388 8.9e-39 163.7 120 68.3
Sopen03g027760 Solanum pennellii HOM05D006678 ORTHO05D008388 8.9e-39 163.7 120 68.3
SGA_v2.0_scaffold50G18440 Striga asiatica HOM05D006678 ORTHO05D008388 8.9e-39 163.7 121 66.1
Ciclev10023015m.g Citrus clementina HOM05D006678 ORTHO05D008388 2.6e-38 162.2 113 70.8
Hma1.2p1_1680F.1_g297200 Hydrangea macrophylla HOM05D006678 ORTHO05D008388 3.4e-38 161.8 120 65.0
Cc02_g00280 Coffea canephora HOM05D006678 ORTHO05D008388 4.4e-38 161.4 114 66.7
A05p44110 Brassica napus HOM05D006678 ORTHO05D008388 9.9e-38 160.2 113 70.8
BraSC90t46700Z Brassica rapa HOM05D006678 ORTHO05D008388 9.9e-38 160.2 113 70.8
Manes.09G127100 Manihot esculenta HOM05D006678 ORTHO05D008388 1.3e-37 159.8 118 69.5
THA.LOC104802920 Tarenaya hassleriana HOM05D006678 ORTHO05D008388 1.7e-37 159.5 113 73.5
GSVIVG01024408001 Vitis vinifera HOM05D006678 ORTHO05D008388 2.2e-37 159.1 113 71.7
THA.LOC104827215 Tarenaya hassleriana HOM05D006678 ORTHO05D008388 2.9e-37 158.7 113 71.7
MD01G1236000 Malus domestica HOM05D006678 ORTHO05D008388 3.7e-37 158.3 113 69.0
CiPaw.06G032600 Carya illinoinensis HOM05D006678 ORTHO05D008388 8.3e-37 157.1 113 70.8
Duzib106G0454 Durio zibethinus HOM05D006678 ORTHO05D008388 8.3e-37 157.1 111 72.1
QL09p024031 Quercus lobata HOM05D006678 ORTHO05D008388 8.3e-37 157.1 112 68.8
arahy.Tifrunner.gnm1.ann1.Z69A25 Arachis hypogaea HOM05D006678 ORTHO05D008388 1.1e-36 156.8 113 68.1
COL.COLO4_11805 Corchorus olitorius HOM05D006678 ORTHO05D008388 1.1e-36 156.8 111 71.2
PGR042G1336 Punica granatum HOM05D006678 ORTHO05D008388 1.9e-36 156.0 117 66.7
ClCG02G007680 Citrullus lanatus HOM05D006678 ORTHO05D008388 2.4e-36 155.6 113 69.0
Thecc.05G213400 Theobroma cacao HOM05D006678 ORTHO05D008388 2.4e-36 155.6 111 71.2
Prupe.2G326100 Prunus persica HOM05D006678 ORTHO05D008388 3.2e-36 155.2 112 67.9
MELO3C024729.2 Cucumis melo HOM05D006678 ORTHO05D008388 5.4e-36 154.5 114 69.3
Duzib177G0619 Durio zibethinus HOM05D006678 ORTHO05D008388 5.4e-36 154.5 111 70.3
TAR629G1392 Trochodendron aralioides HOM05D006678 ORTHO05D008388 7.1e-36 154.1 120 67.5
BNapus_Darmor_BZH_scaffold_129p00040 Brassica napus HOM05D006678 ORTHO05D008388 1.2e-35 153.3 118 66.9
Nn1g01909 Nelumbo nucifera HOM05D006678 ORTHO05D008388 1.2e-35 153.3 124 65.3
Phvul.011G020300 Phaseolus vulgaris HOM05D006678 ORTHO05D008388 1.2e-35 153.3 113 68.1
BolC1t05850H Brassica oleracea HOM05D006678 ORTHO05D008388 1.6e-35 152.9 113 69.0
BraA01t04595Z Brassica rapa HOM05D006678 ORTHO05D008388 1.6e-35 152.9 113 69.0
VMungo1127G1968 Vigna mungo HOM05D006678 ORTHO05D008388 1.6e-35 152.9 113 68.1
FAN03G1679 Fragaria x ananassa HOM05D006678 ORTHO05D008388 2.7e-35 152.1 113 67.3
FAN10G1380 Fragaria x ananassa HOM05D006678 ORTHO05D008388 3.5e-35 151.8 113 67.3
RcHm_v2.0_Chr1g0384211 Rosa chinensis HOM05D006678 ORTHO05D008388 3.5e-35 151.8 113 68.1
Gohir.D13G161000 Gossypium hirsutum HOM05D006678 ORTHO05D008388 4.6e-35 151.4 111 69.4
Gorai.013G181600 Gossypium raimondii HOM05D006678 ORTHO05D008388 4.6e-35 151.4 111 69.4
Oeu063732.2 Olea europaea HOM05D006678 ORTHO05D008388 4.6e-35 151.4 177 49.2
Aqoxy3G02158 Aquilegia oxysepala HOM05D006678 ORTHO05D008388 6.0e-35 151.0 126 62.7
Rhsim03G0221400 Rhododendron simsii HOM05D006678 ORTHO05D008388 6.0e-35 151.0 117 67.5
TWI38G1314 Tripterygium wilfordii HOM05D006678 ORTHO05D008388 6.0e-35 151.0 113 66.4
TWI39G0757 Tripterygium wilfordii HOM05D006678 ORTHO05D008388 6.0e-35 151.0 113 68.1
CANSAT21G1467 Cannabis sativa HOM05D006678 ORTHO05D008388 7.8e-35 150.6 113 66.4
CsaV3_2G036030 Cucumis sativus L. HOM05D006678 ORTHO05D008388 7.8e-35 150.6 114 68.4
Sed0006085 Sechium edule HOM05D006678 ORTHO05D008388 7.8e-35 150.6 113 66.4
Ca_04918_v3 Cicer arietinum L. HOM05D006678 ORTHO05D008388 1.3e-34 149.8 113 66.4
FvH4_7g33980 Fragaria vesca HOM05D006678 ORTHO05D008388 1.7e-34 149.4 113 67.3
Potri.013G082100 Populus trichocarpa HOM05D006678 ORTHO05D008388 2.3e-34 149.1 113 67.3
Medtr4g077807 Medicago truncatula HOM05D006678 ORTHO05D008388 3.0e-34 148.7 113 67.3
Hund09791 Selenicereus undatus HOM05D006678 ORTHO05D008388 3.0e-34 148.7 113 65.5
Gohir.A13G156100 Gossypium hirsutum HOM05D006678 ORTHO05D008388 3.9e-34 148.3 111 67.6
Psat7g171800 Pisum sativum HOM05D006678 ORTHO05D008388 6.6e-34 147.5 113 65.5
FAN01G1466 Fragaria x ananassa HOM05D006678 ORTHO05D008388 8.6e-34 147.1 113 65.5
PSO063G3868 Papaver somniferum HOM05D006678 ORTHO05D008388 8.6e-34 147.1 121 63.6
Glyma.12G017800 Glycine max HOM05D006678 ORTHO05D008388 1.1e-33 146.7 113 65.5
Lj3g0002487 Lotus japonicus HOM05D006678 ORTHO05D008388 1.5e-33 146.4 113 65.5
Lalb_Chr01g0000921 Lupinus albus HOM05D006678 ORTHO05D008388 1.5e-33 146.4 73 86.3
Glyma.11G091800 Glycine max HOM05D006678 ORTHO05D008388 1.9e-33 146.0 113 64.6
Lalb_Chr03g0024411 Lupinus albus HOM05D006678 ORTHO05D008388 3.3e-33 145.2 112 65.2
TPR.G27187 Trifolium pratense HOM05D006678 ORTHO05D008388 3.3e-33 145.2 113 64.6
ATR0829G044 Amborella trichopoda HOM05D006678 ORTHO05D008388 4.3e-33 144.8 121 62.8
PSO782G5154 Papaver somniferum HOM05D006678 ORTHO05D008388 9.6e-33 143.7 121 61.2
Sabra13G0070800 Salix brachista HOM05D006678 ORTHO05D008388 1.2e-32 143.3 116 62.1
ECA232G0519 Erigeron canadensis HOM05D006678 ORTHO05D008388 8.1e-32 140.6 101 70.3
EL10Ac3g05077 Beta vulgaris HOM05D006678 ORTHO05D008388 1.4e-31 139.8 113 62.8
CDE03G0140 Ceratophyllum demersum HOM05D006678 ORTHO05D008388 1.8e-31 139.4 122 59.8
CDE06G2089 Ceratophyllum demersum HOM05D006678 ORTHO05D008388 2.4e-31 139.0 98 68.4
AUR62028176 Chenopodium quinoa HOM05D006678 ORTHO05D008388 1.3e-29 133.3 112 61.6
AUR62002062 Chenopodium quinoa HOM05D006678 ORTHO05D008388 2.2e-29 132.5 112 61.6
Haze_00425 Corylus avellana HOM05D006877 ORTHO05D008735 2.2e-29 132.5 66 87.9
CAN.G1131.11 Capsicum annuum HOM05D006678 ORTHO05D008388 4.9e-29 131.3 64 89.1
Os08g0161700 Oryza sativa ssp. japonica HOM05D006678 ORTHO05D008388 1.1e-28 130.2 81 74.1
Zm00001eb172200 Zea mays HOM05D006678 ORTHO05D008388 5.4e-28 127.9 77 77.9
vmacro22173 Vaccinium macrocarpon HOM05D006678 ORTHO05D008388 9.3e-28 127.1 63 87.3
Nitab4.5_0000011g0100 Nicotiana tabacum HOM05D006678 ORTHO05D008388 1.2e-27 126.7 62 93.5
Gorai.013G182200 Gossypium raimondii HOM05D006678 ORTHO05D008388 1.6e-27 126.3 111 60.4
Pp3c24_2620 Physcomitrium patens HOM05D006678 ORTHO05D008388 1.7e-26 122.9 98 64.3
SEGI_28569 Sequoiadendron giganteum HOM05D006678 ORTHO05D008388 8.7e-26 120.6 63 85.7
Duzib128G0155 Durio zibethinus HOM05D006678 ORTHO05D008388 1.5e-25 119.8 90 66.7
SMO239G0055 Selaginella moellendorffii HOM05D006678 ORTHO05D008388 3.3e-25 118.6 71 71.8
AagrBONN_evm.TU.Sc2ySwM_368.1248 Anthoceros agrestis HOM05D006678 ORTHO05D008388 7.3e-25 117.5 105 56.2
Ah.13g072760 Amaranthus hybridus HOM05D006678 ORTHO05D008388 1.6e-24 116.3 65 84.6
Mapoly0006s0269 Marchantia polymorpha HOM05D006678 ORTHO05D008388 2.1e-24 115.9 105 53.3
Pp3c23_13320 Physcomitrium patens HOM05D006678 ORTHO05D008388 8.1e-24 114.0 86 67.4
PRCOL_00006130 Prasinoderma coloniale HOM05D006678 ORTHO05D008388 2.7e-19 99.0 100 51.0
Sc06g0002530 Simmondsia chinensis HOM05D002239 ORTHO05D002408 9.0e-15 84.0 77 58.4
Cre03.g178250 Chlamydomonas reinhardtii HOM05D006678 ORTHO05D008388 1.5e-14 83.2 86 51.2
Gohir.D13G160300 Gossypium hirsutum HOM05D006678 ORTHO05D008388 1.1e-12 77.0 74 59.5
arahy.Tifrunner.gnm1.ann1.GV73NI Arachis hypogaea HOM05D006678 ORTHO05D008388 2.4e-12 75.9 76 56.6
Zm00001eb415610 Zea mays HOM05D006678 ORTHO05D008388 1.2e-11 73.6 45 77.8
CBR_g6679 Chara braunii HOM05D006678 ORTHO05D008388 3.3e-09 65.5 35 77.1


User provided reference genes

Program Settings