Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_008982 Daucus carota HOM05D008837 ORTHO05D006961 1.5e-40 169.1 87 100.0
DCAR_008981 Daucus carota HOM05D008837 ORTHO05D011237 9.9e-24 113.2 91 67.0
DCAR_020369 Daucus carota HOM05D008837 ORTHO05D011237 1.1e-14 83.2 91 56.0
DCAR_020368 Daucus carota HOM05D008837 ORTHO05D006961 1.1e-11 73.2 93 47.3
Oeu061026.1 Olea europaea HOM05D008837 ORTHO05D006961 2.1e-10 68.9 89 49.4
Manes.05G197800 Manihot esculenta HOM05D008837 ORTHO05D011237 2.8e-10 68.6 88 46.6
Potri.015G004800 Populus trichocarpa HOM05D008837 ORTHO05D011237 2.8e-10 68.6 96 47.9
Sabra15G0003300 Salix brachista HOM05D008837 ORTHO05D006961 3.6e-10 68.2 96 46.9
Hma1.2p1_0415F.1_g148160 Hydrangea macrophylla HOM05D008837 ORTHO05D006961 6.2e-10 67.4 94 47.9
CSS0023145 Camellia sinensis var. sinensis HOM05D008613 ORTHO05D006961 1.8e-09 65.9 90 46.7
Rhsim03G0215000 Rhododendron simsii HOM05D000001 ORTHO05D000003 3.1e-09 65.1 101 44.6
CSS0022315 Camellia sinensis var. sinensis HOM05D008613 ORTHO05D006961 5.3e-09 64.3 94 47.9
Sopen03g022050 Solanum pennellii HOM05D008837 ORTHO05D006961 1.5e-08 62.8 95 47.4
Solyc03g081330.1 Solanum lycopersicum HOM05D008837 ORTHO05D006961 2.0e-08 62.4 96 46.9
Duzib205G1426 Durio zibethinus HOM05D018669 ORTHO05D011237 2.6e-08 62.0 87 41.4
Potri.012G021602 Populus trichocarpa HOM05D008837 ORTHO05D006961 2.6e-08 62.0 97 43.3
PGR042G1156 Punica granatum HOM05D008837 ORTHO05D011237 3.4e-08 61.6 103 44.7
Ciclev10017302m.g Citrus clementina HOM05D008837 ORTHO05D011237 5.8e-08 60.8 95 42.1
Nitab4.5_0000319g0150 Nicotiana tabacum HOM05D008837 ORTHO05D006961 5.8e-08 60.8 105 41.9
Atru.chr12.2412 Acer truncatum HOM05D008837 ORTHO05D011237 9.9e-08 60.1 87 44.8
EL10Ac3g05185 Beta vulgaris HOM05D008837 ORTHO05D006961 1.3e-07 59.7 95 47.4
COL.COLO4_14365 Corchorus olitorius HOM05D018669 ORTHO05D011237 1.7e-07 59.3 85 44.7
PGSC0003DMG400043889 Solanum tuberosum HOM05D008837 ORTHO05D006961 1.7e-07 59.3 107 40.2
Eucgr.A01407 Eucalyptus grandis HOM05D008837 ORTHO05D011237 2.9e-07 58.5 87 42.5
FAN04G2016 Fragaria x ananassa HOM05D008613 ORTHO05D006961 2.9e-07 58.5 84 48.8
FAN08G0050 Fragaria x ananassa HOM05D008613 ORTHO05D006961 2.9e-07 58.5 84 48.8
Thecc.03G208100 Theobroma cacao HOM05D018669 ORTHO05D011237 2.9e-07 58.5 87 43.7
Gohir.A09G186700 Gossypium hirsutum HOM05D018669 ORTHO05D011237 3.8e-07 58.2 91 42.9
vmacro06438 Vaccinium macrocarpon HOM05D000001 ORTHO05D000003 3.8e-07 58.2 98 42.9
Actinidia18679 Actinidia chinensis HOM05D008837 ORTHO05D006961 4.9e-07 57.8 103 39.8
Ciclev10023060m.g Citrus clementina HOM05D008837 ORTHO05D006961 4.9e-07 57.8 95 41.1
FvH4_5g10560 Fragaria vesca HOM05D008613 ORTHO05D006961 6.4e-07 57.4 84 48.8
FAN18G1327 Fragaria x ananassa HOM05D008613 ORTHO05D006961 6.4e-07 57.4 84 48.8
Potri.001G450000 Populus trichocarpa HOM05D008613 ORTHO05D006961 6.4e-07 57.4 88 40.9
Carub.0008s1447 Capsella rubella HOM05D011561 ORTHO05D011237 8.4e-07 57.0 85 42.4
Haze_09201 Corylus avellana HOM05D019613 ORTHO05D006961 8.4e-07 57.0 84 42.9
Gorai.004G128500 Gossypium raimondii HOM05D008613 ORTHO05D006961 8.4e-07 57.0 85 40.0
Dinv29215 Davidia involucrata HOM05D008837 ORTHO05D006961 1.1e-06 56.6 97 41.2
Eucgr.A01409 Eucalyptus grandis HOM05D008837 ORTHO05D011237 1.1e-06 56.6 87 42.5
Oeu023687.1 Olea europaea HOM05D008613 ORTHO05D006961 1.9e-06 55.8 90 38.9
Potri.001G449800 Populus trichocarpa HOM05D008613 ORTHO05D006961 1.9e-06 55.8 88 40.9
Potri.001G449900 Populus trichocarpa HOM05D008613 ORTHO05D006961 1.9e-06 55.8 88 40.9
Ah.07g204750 Amaranthus hybridus HOM05D011561 ORTHO05D011237 3.2e-06 55.1 90 42.2
Sabra16G0303600 Salix brachista HOM05D008613 ORTHO05D006961 3.2e-06 55.1 89 39.3
Sabra16G0303800 Salix brachista HOM05D008613 ORTHO05D006961 3.2e-06 55.1 89 39.3
Actinidia08695 Actinidia chinensis HOM05D008837 ORTHO05D006961 4.2e-06 54.7 91 41.8
EL10Ac3g05184 Beta vulgaris HOM05D008613 ORTHO05D006961 4.2e-06 54.7 92 45.7
Gohir.A08G109100 Gossypium hirsutum HOM05D008613 ORTHO05D006961 4.2e-06 54.7 85 40.0
Prupe.5G133100 Prunus persica HOM05D008613 ORTHO05D006961 4.2e-06 54.7 86 39.5
Sabra16G0303500 Salix brachista HOM05D008613 ORTHO05D006961 4.2e-06 54.7 89 38.2
Cc00_g29530 Coffea canephora HOM05D008837 ORTHO05D011237 5.4e-06 54.3 120 38.3
Sabra16G0303700 Salix brachista HOM05D008613 ORTHO05D006961 5.4e-06 54.3 89 39.3
TAR629G3181 Trochodendron aralioides HOM05D008613 ORTHO05D006961 5.4e-06 54.3 91 42.9
PGSC0003DMG400003217 Solanum tuberosum HOM05D008837 ORTHO05D006961 7.1e-06 53.9 94 41.5
Sabra16G0303900 Salix brachista HOM05D008613 ORTHO05D006961 9.3e-06 53.5 90 41.1
Thecc.03G217500 Theobroma cacao HOM05D008613 ORTHO05D006961 9.3e-06 53.5 89 38.2


User provided reference genes

Program Settings