Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_008981 Daucus carota HOM05D008837 ORTHO05D011237 2.4e-44 181.8 91 100.0
DCAR_008982 Daucus carota HOM05D008837 ORTHO05D006961 1.2e-24 116.3 91 67.0
DCAR_020369 Daucus carota HOM05D008837 ORTHO05D011237 6.1e-16 87.4 92 57.6
DCAR_020368 Daucus carota HOM05D008837 ORTHO05D006961 1.7e-13 79.3 94 47.9
Potri.015G004800 Populus trichocarpa HOM05D008837 ORTHO05D011237 1.0e-10 70.1 96 47.9
Sabra15G0003300 Salix brachista HOM05D008837 ORTHO05D006961 3.8e-10 68.2 96 46.9
Hma1.2p1_0415F.1_g148160 Hydrangea macrophylla HOM05D008837 ORTHO05D006961 3.2e-09 65.1 93 44.1
Rhsim03G0215000 Rhododendron simsii HOM05D000001 ORTHO05D000003 3.2e-09 65.1 101 45.5
Oeu061026.1 Olea europaea HOM05D008837 ORTHO05D006961 5.5e-09 64.3 90 43.3
Actinidia18679 Actinidia chinensis HOM05D008837 ORTHO05D006961 1.2e-08 63.2 102 42.2
Solyc03g081330.1 Solanum lycopersicum HOM05D008837 ORTHO05D006961 2.1e-08 62.4 95 44.2
Manes.05G197800 Manihot esculenta HOM05D008837 ORTHO05D011237 3.6e-08 61.6 91 40.7
Potri.012G021602 Populus trichocarpa HOM05D008837 ORTHO05D006961 4.7e-08 61.2 97 43.3
Dinv29215 Davidia involucrata HOM05D008837 ORTHO05D006961 6.1e-08 60.8 95 44.2
CSS0023145 Camellia sinensis var. sinensis HOM05D008613 ORTHO05D006961 7.9e-08 60.5 93 43.0
Sopen03g022050 Solanum pennellii HOM05D008837 ORTHO05D006961 7.9e-08 60.5 94 43.6
COL.COLO4_14365 Corchorus olitorius HOM05D018669 ORTHO05D011237 1.4e-07 59.7 89 42.7
Nitab4.5_0005040g0030 Nicotiana tabacum HOM05D008837 ORTHO05D006961 1.4e-07 59.7 105 41.9
PGSC0003DMG400043889 Solanum tuberosum HOM05D008837 ORTHO05D006961 1.4e-07 59.7 106 41.5
Thecc.03G208100 Theobroma cacao HOM05D018669 ORTHO05D011237 1.8e-07 59.3 91 42.9
CSS0022315 Camellia sinensis var. sinensis HOM05D008613 ORTHO05D006961 2.3e-07 58.9 91 40.7
Gohir.A09G186700 Gossypium hirsutum HOM05D018669 ORTHO05D011237 3.0e-07 58.5 96 43.8
Ciclev10017302m.g Citrus clementina HOM05D008837 ORTHO05D011237 3.9e-07 58.2 95 40.0
Ciclev10023060m.g Citrus clementina HOM05D008837 ORTHO05D006961 3.9e-07 58.2 93 40.9
Nitab4.5_0000319g0150 Nicotiana tabacum HOM05D008837 ORTHO05D006961 5.1e-07 57.8 100 42.0
Sp6g16220 Schrenkiella parvula HOM05D011561 ORTHO05D011237 5.1e-07 57.8 90 41.1
Atru.chr12.2412 Acer truncatum HOM05D008837 ORTHO05D011237 8.8e-07 57.0 91 40.7
Actinidia08695 Actinidia chinensis HOM05D008837 ORTHO05D006961 8.8e-07 57.0 92 41.3
Ah.07g204750 Amaranthus hybridus HOM05D011561 ORTHO05D011237 1.1e-06 56.6 94 38.3
PGSC0003DMG400003217 Solanum tuberosum HOM05D008837 ORTHO05D006961 1.1e-06 56.6 98 42.9
Eucgr.A01407 Eucalyptus grandis HOM05D008837 ORTHO05D011237 2.6e-06 55.5 90 41.1
Oeu023687.1 Olea europaea HOM05D008613 ORTHO05D006961 2.6e-06 55.5 90 40.0
PGR042G1156 Punica granatum HOM05D008837 ORTHO05D011237 2.6e-06 55.5 102 43.1
BcaC01g06288 Brassica carinata HOM05D011561 ORTHO05D011237 3.3e-06 55.1 91 39.6
BcaC01g06291 Brassica carinata HOM05D011561 ORTHO05D011237 3.3e-06 55.1 91 39.6
BolC3t14140H Brassica oleracea HOM05D011561 ORTHO05D011237 3.3e-06 55.1 91 39.6
Thhalv10015156m.g Eutrema salsugineum HOM05D011561 ORTHO05D011237 3.3e-06 55.1 91 40.7
AL8G29380 Arabidopsis lyrata HOM05D011561 ORTHO05D011237 4.4e-06 54.7 90 40.0
Duzib205G1426 Durio zibethinus HOM05D018669 ORTHO05D011237 4.4e-06 54.7 91 37.4
Eucgr.A01409 Eucalyptus grandis HOM05D008837 ORTHO05D011237 4.4e-06 54.7 90 41.1
CANSAT21G0289 Cannabis sativa HOM05D018669 ORTHO05D011237 5.7e-06 54.3 93 40.9
BraA03t10770Z Brassica rapa HOM05D011561 ORTHO05D011237 9.7e-06 53.5 91 37.4
Carub.0008s1447 Capsella rubella HOM05D011561 ORTHO05D011237 9.7e-06 53.5 88 37.5
Gorai.006G203600 Gossypium raimondii HOM05D018669 ORTHO05D011237 9.7e-06 53.5 100 40.0
PGSC0003DMG400003216 Solanum tuberosum HOM05D008837 ORTHO05D006961 9.7e-06 53.5 106 39.6
vmacro06438 Vaccinium macrocarpon HOM05D000001 ORTHO05D000003 9.7e-06 53.5 94 38.3


User provided reference genes

Program Settings