Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_008967 Daucus carota HOM05D003640 ORTHO05D004439 0.0e+00 1412.5 770 100.0
DCAR_020359 Daucus carota HOM05D003640 ORTHO05D004439 6.5e-236 821.2 829 59.6
CSS0041088 Camellia sinensis var. sinensis HOM05D003640 ORTHO05D004439 4.2e-203 712.2 864 53.9
Dinv29226 Davidia involucrata HOM05D003640 ORTHO05D004439 9.8e-200 701.0 785 54.6
Actinidia28276 Actinidia chinensis HOM05D003640 ORTHO05D004439 2.0e-189 666.8 876 50.2
Prupe.2G317300 Prunus persica HOM05D003640 ORTHO05D004439 1.2e-186 657.5 864 49.2
QL93p0214_0013 Quercus lobata HOM05D003640 ORTHO05D004439 1.2e-184 651.0 836 50.8
Atru.chr12.2367 Acer truncatum HOM05D003640 ORTHO05D004439 2.6e-184 649.8 842 49.6
Actinidia34257 Actinidia chinensis HOM05D003640 ORTHO05D004439 3.4e-184 649.4 879 48.8
GSVIVG01038625001 Vitis vinifera HOM05D003640 ORTHO05D004439 3.4e-184 649.4 748 53.2
QL09p007408 Quercus lobata HOM05D003640 ORTHO05D004439 5.8e-184 648.7 838 51.1
Actinidia08687 Actinidia chinensis HOM05D003640 ORTHO05D004439 1.3e-183 647.5 813 52.5
Dinv35374 Davidia involucrata HOM05D003640 ORTHO05D004439 6.4e-183 645.2 765 53.6
Rhsim03G0214000 Rhododendron simsii HOM05D003640 ORTHO05D004439 6.4e-183 645.2 809 53.3
Manes.01G041300 Manihot esculenta HOM05D003640 ORTHO05D004439 7.1e-182 641.7 824 51.3
Potri.012G023200 Populus trichocarpa HOM05D003640 ORTHO05D004439 3.0e-180 636.3 820 49.0
Potri.015G006700 Populus trichocarpa HOM05D003640 ORTHO05D004439 6.2e-178 628.6 824 49.3
vmacro06427 Vaccinium macrocarpon HOM05D003640 ORTHO05D004439 6.2e-178 628.6 911 47.6
MD01G1227300 Malus domestica HOM05D003640 ORTHO05D004439 1.2e-176 624.4 855 48.0
TAR375G0550 Trochodendron aralioides HOM05D003640 ORTHO05D004439 2.4e-174 616.7 805 49.8
MD07G1297600 Malus domestica HOM05D003640 ORTHO05D004439 3.2e-174 616.3 856 48.6
Haze_00277 Corylus avellana HOM05D003640 ORTHO05D004439 6.0e-173 612.1 876 47.4
Sabra15G0004700 Salix brachista HOM05D003640 ORTHO05D004439 3.0e-172 609.8 827 48.5
Cc02_g00960 Coffea canephora HOM05D003640 ORTHO05D004439 1.1e-171 607.8 807 50.8
RcHm_v2.0_Chr1g0382521 Rosa chinensis HOM05D003640 ORTHO05D004439 2.5e-171 606.7 789 51.1
FAN01G0295 Fragaria x ananassa HOM05D003640 ORTHO05D004439 2.8e-170 603.2 835 48.1
TWI39G1295 Tripterygium wilfordii HOM05D003640 ORTHO05D004439 4.7e-170 602.4 844 47.6
CSS0045837 Camellia sinensis var. sinensis HOM05D003640 ORTHO05D004439 1.8e-169 600.5 751 52.7
FAN10G2795 Fragaria x ananassa HOM05D003640 ORTHO05D004439 4.0e-169 599.4 841 49.3
FAN10G0822 Fragaria x ananassa HOM05D003640 ORTHO05D004439 1.5e-168 597.4 814 49.9
Duzib084G0116 Durio zibethinus HOM05D003640 ORTHO05D004439 3.4e-168 596.3 863 46.8
Sabra12G0010700 Salix brachista HOM05D003640 ORTHO05D004439 5.8e-168 595.5 900 44.7
Nn1g00405 Nelumbo nucifera HOM05D003640 ORTHO05D004439 8.4e-167 591.7 817 47.5
TAR629G0154 Trochodendron aralioides HOM05D003640 ORTHO05D004439 7.1e-166 588.6 762 48.4
Nn3g18833 Nelumbo nucifera HOM05D003640 ORTHO05D004439 1.0e-164 584.7 831 46.9
Sed0021595 Sechium edule HOM05D003640 ORTHO05D004439 6.6e-164 582.0 857 45.4
CANSAT21G0645 Cannabis sativa HOM05D003640 ORTHO05D004439 1.1e-163 581.3 846 45.6
Oeu037965.1 Olea europaea HOM05D003640 ORTHO05D004439 1.5e-163 580.9 806 48.6
Thecc.03G206700 Theobroma cacao HOM05D003640 ORTHO05D004439 1.5e-163 580.9 863 47.3
FvH4_7g32660 Fragaria vesca HOM05D003640 ORTHO05D004439 2.5e-163 580.1 755 49.8
MELO3C005925.2 Cucumis melo HOM05D003640 ORTHO05D004439 2.1e-162 577.0 876 45.0
CiPaw.06G042300 Carya illinoinensis HOM05D003640 ORTHO05D004439 2.8e-162 576.6 858 45.3
Glyma.04G230800 Glycine max HOM05D003640 ORTHO05D004439 3.1e-161 573.2 847 45.5
MSTRG.26989 Avicennia marina HOM05D003640 ORTHO05D004439 1.2e-160 571.2 811 48.5
ClCG01G000140 Citrullus lanatus HOM05D003640 ORTHO05D004439 1.5e-160 570.9 880 45.2
Glyma.06G134300 Glycine max HOM05D003640 ORTHO05D004439 3.4e-160 569.7 814 46.4
arahy.Tifrunner.gnm1.ann1.1EDB5Y Arachis hypogaea HOM05D003640 ORTHO05D004439 1.7e-159 567.4 738 48.8
FAN03G1455 Fragaria x ananassa HOM05D003640 ORTHO05D004439 2.2e-159 567.0 843 48.3
CiPaw.05G202900 Carya illinoinensis HOM05D003640 ORTHO05D004439 2.9e-159 566.6 764 48.8
CsaV3_5G000020 Cucumis sativus L. HOM05D003640 ORTHO05D004439 8.4e-159 565.1 876 44.4
Solyc03g082490.4 Solanum lycopersicum HOM05D003640 ORTHO05D004439 1.1e-158 564.7 842 45.1
arahy.Tifrunner.gnm1.ann1.BT3HV7 Arachis hypogaea HOM05D003640 ORTHO05D004439 4.2e-158 562.8 738 48.4
Lj1g0027227 Lotus japonicus HOM05D003640 ORTHO05D004439 5.4e-158 562.4 745 47.0
VMungo1309G3003 Vigna mungo HOM05D003640 ORTHO05D004439 1.3e-156 557.8 839 44.1
Lalb_Chr23g0271841 Lupinus albus HOM05D003640 ORTHO05D004439 2.3e-156 557.0 795 47.7
Ca_16756_v3 Cicer arietinum L. HOM05D003640 ORTHO05D004439 3.9e-156 556.2 778 46.9
Sed0000635 Sechium edule HOM05D003640 ORTHO05D004439 1.5e-155 554.3 871 44.1
Nitab4.5_0001993g0040 Nicotiana tabacum HOM05D003640 ORTHO05D004439 5.6e-155 552.4 790 45.9
EL10Ac3g05201 Beta vulgaris HOM05D003640 ORTHO05D004439 1.3e-154 551.2 836 45.0
AUR62006022 Chenopodium quinoa HOM05D003640 ORTHO05D004439 3.6e-154 549.7 770 46.9
Medtr3g092250 Medicago truncatula HOM05D003640 ORTHO05D004439 6.2e-154 548.9 798 45.4
Lalb_Chr08g0239801 Lupinus albus HOM05D003640 ORTHO05D004439 2.4e-153 547.0 817 44.2
Hma1.2p1_0094F.1_g047240 Hydrangea macrophylla HOM05D003640 ORTHO05D004439 2.6e-152 543.5 878 44.6
Phvul.009G050200 Phaseolus vulgaris HOM05D003640 ORTHO05D004439 2.6e-152 543.5 738 48.2
Oeu055180.3 Olea europaea HOM05D003640 ORTHO05D004439 5.8e-152 542.3 840 46.7
TAR636G3562 Trochodendron aralioides HOM05D003640 ORTHO05D004439 7.6e-152 542.0 750 48.1
Lalb_Chr11g0067271 Lupinus albus HOM05D003640 ORTHO05D004439 8.4e-151 538.5 738 45.7
MSTRG.8618 Avicennia marina HOM05D003640 ORTHO05D004439 2.4e-150 537.0 783 48.3
Hund09700 Selenicereus undatus HOM05D003640 ORTHO05D004439 3.2e-150 536.6 782 44.8
Psat0s2807g0080 Pisum sativum HOM05D003640 ORTHO05D004439 2.1e-149 533.9 783 46.6
Gorai.004G124100 Gossypium raimondii HOM05D003640 ORTHO05D004439 4.6e-149 532.7 851 43.5
Gohir.D08G115200 Gossypium hirsutum HOM05D003640 ORTHO05D004439 1.9e-147 527.3 854 43.7
PGR142G2086 Punica granatum HOM05D003640 ORTHO05D004439 5.6e-147 525.8 808 45.4
Hund21040 Selenicereus undatus HOM05D003640 ORTHO05D004439 7.4e-147 525.4 787 44.2
AUR62035604 Chenopodium quinoa HOM05D003640 ORTHO05D004439 1.3e-146 524.6 745 46.0
Migut.F00997 Erythranthe guttata HOM05D003640 ORTHO05D004439 1.3e-146 524.6 799 45.4
Gohir.D09G181300 Gossypium hirsutum HOM05D003640 ORTHO05D004439 4.0e-145 519.6 816 44.4
ECA232G0587 Erigeron canadensis HOM05D003640 ORTHO05D004439 1.2e-144 518.1 725 47.0
Lj1C1026T8 Lonicera japonica HOM05D003640 ORTHO05D004439 4.5e-144 516.2 845 45.1
Gohir.A08G103800 Gossypium hirsutum HOM05D003640 ORTHO05D004439 7.6e-144 515.4 854 43.1
SalBow6G0961 Salvia bowleyana HOM05D003640 ORTHO05D004439 1.0e-143 515.0 817 44.7
Duzib068G1167 Durio zibethinus HOM05D003640 ORTHO05D004439 2.9e-143 513.5 858 43.1
SGA_v2.0_scaffold565G52945 Striga asiatica HOM05D003640 ORTHO05D004439 4.2e-142 509.6 764 45.3
CAN.G358.147 Capsicum annuum HOM05D003640 ORTHO05D004439 5.5e-142 509.2 625 50.4
HanXRQChr05g0139301 Helianthus annuus HOM05D003640 ORTHO05D004439 9.3e-142 508.4 797 44.2
Sopen03g022220 Solanum pennellii HOM05D003640 ORTHO05D004439 4.6e-141 506.1 711 47.0
Duzib205G1657 Durio zibethinus HOM05D003640 ORTHO05D004439 3.9e-140 503.1 861 43.2
MBI12_g23004_MAGBIO Magnolia biondii HOM05D003640 ORTHO05D004439 2.5e-139 500.4 767 42.9
Gohir.A09G186400 Gossypium hirsutum HOM05D003640 ORTHO05D004439 7.4e-139 498.8 808 42.8
Aqoxy7G00014 Aquilegia oxysepala HOM05D003640 ORTHO05D004439 1.8e-137 494.2 808 42.3
MSTRG.8540 Avicennia marina HOM05D003640 ORTHO05D004439 1.7e-135 487.6 745 45.9
Gorai.006G203300 Gossypium raimondii HOM05D003640 ORTHO05D004439 1.9e-134 484.2 816 43.3
Oeu061023.1 Olea europaea HOM05D003640 ORTHO05D004439 1.9e-134 484.2 767 45.5
Lsat_1_v5_gn_9_50221 Lactuca sativa HOM05D003640 ORTHO05D004439 9.3e-134 481.9 746 44.9
Sc19g0000670 Simmondsia chinensis HOM05D003640 ORTHO05D004439 9.3e-134 481.9 686 48.3
THA.LOC104825162 Tarenaya hassleriana HOM05D003640 ORTHO05D004439 4.6e-133 479.6 817 42.8
Gohir.D12G247700 Gossypium hirsutum HOM05D003640 ORTHO05D004439 7.9e-133 478.8 861 41.8
Gorai.008G265800 Gossypium raimondii HOM05D003640 ORTHO05D004439 7.9e-133 478.8 861 41.8
PSO135G0929 Papaver somniferum HOM05D003640 ORTHO05D004439 7.9e-133 478.8 843 41.9
PSO384G0385 Papaver somniferum HOM05D003640 ORTHO05D004439 1.0e-132 478.4 855 41.1
SGA_v2.0_scaffold136G35055 Striga asiatica HOM05D003640 ORTHO05D004439 1.3e-132 478.0 782 45.0
Lsat_1_v5_gn_9_50181 Lactuca sativa HOM05D003640 ORTHO05D004439 3.0e-132 476.9 743 44.7
SalBow2G2490 Salvia bowleyana HOM05D003640 ORTHO05D004439 1.5e-131 474.6 793 43.6
Gohir.A12G247000 Gossypium hirsutum HOM05D003640 ORTHO05D004439 1.9e-131 474.2 860 41.3
Cpa.g.sc3.144 Carica papaya HOM05D003640 ORTHO05D004439 7.4e-131 472.2 656 48.2
HanXRQChr15g0485391 Helianthus annuus HOM05D003640 ORTHO05D004439 3.4e-128 463.4 796 42.0
COL.COLO4_14351 Corchorus olitorius HOM05D003640 ORTHO05D004439 5.5e-126 456.1 841 39.7
unitig_92.g28243 Utricularia gibba HOM05D003640 ORTHO05D004439 2.1e-125 454.1 782 43.9
Ah.07g204850 Amaranthus hybridus HOM05D003640 ORTHO05D004439 5.1e-124 449.5 840 41.5
Aa31sc289G20 Aethionema arabicum HOM05D003640 ORTHO05D004439 2.8e-122 443.7 686 43.3
TWI23G0563 Tripterygium wilfordii HOM05D003640 ORTHO05D004439 3.7e-122 443.4 654 45.1
Os08g0543600 Oryza sativa ssp. japonica HOM05D003640 ORTHO05D004439 5.1e-116 422.9 776 39.7
ATR0580G072 Amborella trichopoda HOM05D003640 ORTHO05D004439 4.4e-115 419.9 829 39.0
Carub.0008s1397 Capsella rubella HOM05D003640 ORTHO05D004439 5.0e-111 406.4 729 41.3
AL8G28460 Arabidopsis lyrata HOM05D003640 ORTHO05D004439 7.2e-110 402.5 723 42.5
CARHR266800 Cardamine hirsuta HOM05D003640 ORTHO05D004439 1.6e-109 401.4 723 42.5
HPP92_020943 Vanilla planifolia HOM05D003640 ORTHO05D008613 1.4e-108 398.3 811 39.7
CARHR266770 Cardamine hirsuta HOM05D003640 ORTHO05D004439 2.3e-108 397.5 713 42.1
AT5G53620 Arabidopsis thaliana HOM05D003640 ORTHO05D004439 9.7e-107 392.1 727 40.9
Zm00001eb198460 Zea mays HOM05D003640 ORTHO05D004439 9.7e-107 392.1 727 39.9
Zm00001eb037420 Zea mays HOM05D003640 ORTHO05D004439 2.8e-106 390.6 746 38.7
BcaB01g04251 Brassica carinata HOM05D003640 ORTHO05D004439 3.7e-106 390.2 701 42.9
C03p17530 Brassica napus HOM05D003640 ORTHO05D004439 1.8e-105 387.9 702 42.3
PSO063G3729 Papaver somniferum HOM05D003640 ORTHO05D004439 2.4e-105 387.5 775 39.2
BolC3t14166H Brassica oleracea HOM05D003640 ORTHO05D004439 4.1e-105 386.7 712 41.9
CDE04G2417 Ceratophyllum demersum HOM05D003640 ORTHO05D004439 2.9e-103 380.6 743 38.6
Thhalv10012857m.g Eutrema salsugineum HOM05D003640 ORTHO05D004439 3.8e-103 380.2 729 40.9
BraA03t10798Z Brassica rapa HOM05D003640 ORTHO05D004439 7.2e-102 375.9 713 41.4
Sp6g15750 Schrenkiella parvula HOM05D003640 ORTHO05D004439 1.2e-101 375.2 711 40.1
A03p15040 Brassica napus HOM05D003640 ORTHO05D004439 2.1e-101 374.4 705 41.7
Carub.0008s1383 Capsella rubella HOM05D003640 ORTHO05D004439 8.8e-100 369.0 720 41.0
BcaB05g22060 Brassica carinata HOM05D003640 ORTHO05D004439 9.8e-91 339.0 702 41.6
Sp6g15760 Schrenkiella parvula HOM05D003640 ORTHO05D004439 1.9e-86 324.7 733 38.3
BcaB01g04247 Brassica carinata HOM05D003640 ORTHO05D004439 3.5e-72 277.3 654 37.3
RcHm_v2.0_Chr1g0382561 Rosa chinensis HOM05D003640 ORTHO05D004439 7.8e-72 276.2 463 43.6
QL09p007399 Quercus lobata HOM05D003640 ORTHO05D004439 1.0e-71 275.8 314 53.8
QL93p0214_0021 Quercus lobata HOM05D003640 ORTHO05D004439 1.0e-71 275.8 314 53.8
SHI02298 Sapria himalayana HOM05D003640 ORTHO05D004439 8.9e-68 262.7 409 45.7
Mapoly0021s0043 Marchantia polymorpha HOM05D003640 ORTHO05D004439 5.8e-67 260.0 933 30.9
BcaC01g06262 Brassica carinata HOM05D003640 ORTHO05D004439 9.2e-65 252.7 697 34.9
Pp3c14_13150 Physcomitrium patens HOM05D003640 ORTHO05D004439 1.4e-60 238.8 850 30.2
RcHm_v2.0_Chr1g0382631 Rosa chinensis HOM05D003640 ORTHO05D004439 7.6e-59 233.0 375 42.9
Pp3c17_17470 Physcomitrium patens HOM05D003640 ORTHO05D004439 1.7e-58 231.9 811 30.3
SEGI_36158 Sequoiadendron giganteum HOM05D003640 ORTHO05D004439 4.2e-49 200.7 336 43.5
RcHm_v2.0_Chr1g0382611 Rosa chinensis HOM05D003640 ORTHO05D004439 1.3e-45 189.1 240 51.2
unitig_37.g11993 Utricularia gibba HOM05D003640 ORTHO05D004439 1.8e-44 185.3 726 30.9
arahy.Tifrunner.gnm1.ann1.3V8RAA Arachis hypogaea HOM05D003640 ORTHO05D004439 3.1e-36 157.9 406 32.3
CDE07G0792 Ceratophyllum demersum HOM05D003640 ORTHO05D004439 3.4e-35 154.5 682 27.4
C09p43570 Brassica napus HOM05D003640 ORTHO05D004439 1.7e-34 152.1 214 43.9
A03p14940 Brassica napus HOM05D003640 ORTHO05D004439 3.8e-34 151.0 163 55.2
BraA03t10789Z Brassica rapa HOM05D003640 ORTHO05D004439 4.9e-34 150.6 163 55.2
RcHm_v2.0_Chr1g0382641 Rosa chinensis HOM05D003640 ORTHO05D004439 5.5e-33 147.1 107 72.9
HanXRQChr03g0061701 Helianthus annuus HOM05D003640 ORTHO05D004439 9.0e-28 129.8 181 43.6
CDE04G2700 Ceratophyllum demersum HOM05D003640 ORTHO05D004439 1.0e-23 116.3 114 55.3
PSO782G5739 Papaver somniferum HOM05D003640 ORTHO05D004439 7.4e-22 110.2 139 45.3
HanXRQChr06g0170111 Helianthus annuus HOM05D003640 ORTHO05D004439 2.4e-20 105.1 130 43.8
HanXRQChr15g0479781 Helianthus annuus HOM05D003640 ORTHO05D004439 2.2e-18 98.6 128 43.8
Potri.016G069900 Populus trichocarpa HOM05D003640 ORTHO05D034990 3.6e-16 91.3 56 78.6
C09p43560 Brassica napus HOM05D003640 ORTHO05D004439 2.5e-14 85.1 103 47.6
BolC9t57239H Brassica oleracea HOM05D003640 ORTHO05D004439 2.5e-14 85.1 103 47.6
Dinv06471 Davidia involucrata HOM05D003640 ORTHO05D004439 1.3e-13 82.8 128 46.1
PSO017G5262 Papaver somniferum HOM05D003640 ORTHO05D004439 9.1e-12 76.6 170 34.1
arahy.Tifrunner.gnm1.ann1.JKFZ9B Arachis hypogaea HOM05D003640 ORTHO05D082470 9.4e-09 66.6 63 55.6
COL.COLO4_06022 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.2e-08 66.2 115 42.6
PSO170G6851 Papaver somniferum HOM05D003640 ORTHO05D004439 1.6e-08 65.9 146 34.2
BolC9t57241H Brassica oleracea HOM05D003640 ORTHO05D004439 4.6e-08 64.3 117 41.0
C02p18030 Brassica napus HOM05D003640 ORTHO05D004439 6.1e-08 63.9 310 26.5
CAN.G1387.1 Capsicum annuum HOM05D003640 ORTHO05D004439 6.1e-08 63.9 209 29.7
BolC2t07935H Brassica oleracea HOM05D003640 ORTHO05D004439 3.9e-07 61.2 306 26.5
HanXRQChr11g0343691 Helianthus annuus HOM05D000954 ORTHO05D016146 1.1e-06 59.7 34 79.4
HanXRQChr09g0246151 Helianthus annuus HOM05D003640 ORTHO05D016146 2.0e-06 58.9 66 45.5
ECA232G0388 Erigeron canadensis HOM05D003640 ORTHO05D004439 9.7e-06 56.6 69 43.5


User provided reference genes

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