Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_008945 Daucus carota HOM05D001074 ORTHO05D001188 7.8e-90 334.0 192 100.0
DCAR_020334 Daucus carota HOM05D001074 ORTHO05D001188 4.2e-43 178.7 190 59.5
CSS0024412 Camellia sinensis var. sinensis HOM05D001074 ORTHO05D001188 8.8e-41 171.0 195 55.9
MD07G1293000 Malus domestica HOM05D001074 ORTHO05D001188 2.6e-40 169.5 193 61.7
Lj1g0025836 Lotus japonicus HOM05D001074 ORTHO05D001188 4.1e-38 162.2 192 60.4
TWI39G0168 Tripterygium wilfordii HOM05D001074 ORTHO05D001188 9.1e-38 161.0 200 50.5
RcHm_v2.0_Chr1g0381461 Rosa chinensis HOM05D001074 ORTHO05D001188 2.0e-37 159.8 192 56.8
FAN03G0931 Fragaria x ananassa HOM05D001074 ORTHO05D001188 4.5e-37 158.7 190 57.9
FvH4_7g31960 Fragaria vesca HOM05D001074 ORTHO05D001188 7.7e-37 157.9 192 57.3
FAN10G3632 Fragaria x ananassa HOM05D001074 ORTHO05D001188 7.7e-37 157.9 192 57.3
FAN01G2022 Fragaria x ananassa HOM05D001074 ORTHO05D001188 1.0e-36 157.5 192 57.8
FAN06G1154 Fragaria x ananassa HOM05D001074 ORTHO05D001188 1.0e-36 157.5 192 57.8
Lsat_1_v5_gn_8_5340 Lactuca sativa HOM05D001074 ORTHO05D001188 2.2e-36 156.4 198 55.6
TAR374G1588 Trochodendron aralioides HOM05D001074 ORTHO05D001188 2.9e-36 156.0 193 57.5
FAN10G1322 Fragaria x ananassa HOM05D001074 ORTHO05D001188 3.8e-36 155.6 192 56.8
COL.COLO4_16786 Corchorus olitorius HOM05D001074 ORTHO05D001188 5.0e-36 155.2 202 52.0
Haze_00199 Corylus avellana HOM05D001074 ORTHO05D001188 6.5e-36 154.8 193 58.5
Manes.01G184800 Manihot esculenta HOM05D001074 ORTHO05D001188 6.5e-36 154.8 194 51.5
SalBow4G3282 Salvia bowleyana HOM05D001074 ORTHO05D001188 1.5e-35 153.7 193 58.0
GSVIVG01038564001 Vitis vinifera HOM05D001074 ORTHO05D001188 1.5e-35 153.7 187 50.8
PGR142G0617 Punica granatum HOM05D001074 ORTHO05D001188 4.2e-35 152.1 192 55.7
Lalb_Chr08g0240151 Lupinus albus HOM05D001074 ORTHO05D001188 5.5e-35 151.8 192 59.4
Cfa016241 Carpinus fangiana HOM05D001074 ORTHO05D001188 7.2e-35 151.4 193 58.5
QL09p008639 Quercus lobata HOM05D001074 ORTHO05D001188 7.2e-35 151.4 192 57.3
ECA233G1696 Erigeron canadensis HOM05D001074 ORTHO05D001188 1.2e-34 150.6 193 53.9
Duzib205G0639 Durio zibethinus HOM05D001074 ORTHO05D001188 4.7e-34 148.7 202 51.5
Ca_16718_v3 Cicer arietinum L. HOM05D001074 ORTHO05D001188 8.0e-34 147.9 192 58.3
arahy.Tifrunner.gnm1.ann1.ADUU08 Arachis hypogaea HOM05D001074 ORTHO05D001188 2.3e-33 146.4 192 57.8
CSS0010942 Camellia sinensis var. sinensis HOM05D001074 ORTHO05D001188 3.0e-33 146.0 193 58.5
Glyma.14G138980 Glycine max HOM05D001074 ORTHO05D001188 4.0e-33 145.6 178 59.6
Nn1g00291 Nelumbo nucifera HOM05D001074 ORTHO05D001188 4.0e-33 145.6 195 54.4
CANSAT21G0656 Cannabis sativa HOM05D001074 ORTHO05D001188 6.7e-33 144.8 194 58.8
MSTRG.8646 Avicennia marina HOM05D001074 ORTHO05D001188 8.8e-33 144.4 196 49.0
Dinv29266 Davidia involucrata HOM05D001074 ORTHO05D001188 8.8e-33 144.4 152 61.2
Duzib084G1329 Durio zibethinus HOM05D001074 ORTHO05D001188 8.8e-33 144.4 200 49.5
MD01G1222400 Malus domestica HOM05D001074 ORTHO05D001188 1.2e-32 144.1 193 57.5
Medtr1g007880 Medicago truncatula HOM05D001074 ORTHO05D001188 1.2e-32 144.1 193 58.0
Prupe.2G312800 Prunus persica HOM05D001074 ORTHO05D001188 1.2e-32 144.1 193 57.0
Sed0019067 Sechium edule HOM05D001074 ORTHO05D001188 1.2e-32 144.1 195 53.3
Cc02_g01400 Coffea canephora HOM05D001074 ORTHO05D001188 2.0e-32 143.3 196 57.1
TPR.G12056 Trifolium pratense HOM05D001074 ORTHO05D001188 2.0e-32 143.3 193 57.0
Migut.F00202 Erythranthe guttata HOM05D001074 ORTHO05D001188 2.6e-32 142.9 194 54.6
ClCG05G009010 Citrullus lanatus HOM05D001074 ORTHO05D001188 3.3e-32 142.5 195 53.3
Glyma.06G130100 Glycine max HOM05D001074 ORTHO05D001188 3.3e-32 142.5 192 57.8
arahy.Tifrunner.gnm1.ann1.T964H7 Arachis hypogaea HOM05D001074 ORTHO05D001188 4.4e-32 142.1 190 56.8
CiPaw.05G197800 Carya illinoinensis HOM05D001074 ORTHO05D001188 5.7e-32 141.7 195 57.4
Thecc.03G200600 Theobroma cacao HOM05D001074 ORTHO05D001188 5.7e-32 141.7 204 48.5
MELO3C008503.2 Cucumis melo HOM05D001074 ORTHO05D001188 7.5e-32 141.4 203 52.7
HanXRQChr07g0205121 Helianthus annuus HOM05D001074 ORTHO05D001188 7.5e-32 141.4 195 52.8
Hma1.2p1_1507F.1_g287650 Hydrangea macrophylla HOM05D001074 ORTHO05D001188 7.5e-32 141.4 193 49.7
Hund11651 Selenicereus undatus HOM05D001074 ORTHO05D001188 9.7e-32 141.0 179 52.0
Lalb_Chr11g0066971 Lupinus albus HOM05D001074 ORTHO05D001188 1.3e-31 140.6 193 58.0
Phvul.009G051500 Phaseolus vulgaris HOM05D001074 ORTHO05D001188 1.3e-31 140.6 194 56.2
Gohir.A12G249100 Gossypium hirsutum HOM05D001074 ORTHO05D001188 1.7e-31 140.2 203 49.3
Sc13g0009950 Simmondsia chinensis HOM05D001074 ORTHO05D001188 2.2e-31 139.8 197 49.2
CsaV3_3G019770 Cucumis sativus L. HOM05D001074 ORTHO05D001188 2.8e-31 139.4 203 52.2
Psat6g034880 Pisum sativum HOM05D001074 ORTHO05D001188 3.7e-31 139.0 191 58.6
Actinidia08659 Actinidia chinensis HOM05D001074 ORTHO05D001188 4.8e-31 138.7 195 51.8
Glyma.04G234500 Glycine max HOM05D001074 ORTHO05D001188 4.8e-31 138.7 192 56.8
Ciclev10021055m.g Citrus clementina HOM05D001074 ORTHO05D001188 8.2e-31 137.9 201 53.7
DCAR_010594 Daucus carota HOM05D001074 ORTHO05D001188 8.2e-31 137.9 198 48.0
Oeu023661.1 Olea europaea HOM05D001074 ORTHO05D001188 1.4e-30 137.1 193 54.4
AT5G24310 Arabidopsis thaliana HOM05D001074 ORTHO05D001188 1.8e-30 136.7 202 49.0
VMungo1309G0031 Vigna mungo HOM05D001074 ORTHO05D001188 1.8e-30 136.7 194 55.2
Atru.chr12.2240 Acer truncatum HOM05D001074 ORTHO05D001188 3.1e-30 136.0 200 48.0
Gohir.D12G249900 Gossypium hirsutum HOM05D001074 ORTHO05D001188 3.1e-30 136.0 203 48.3
Gorai.008G268000 Gossypium raimondii HOM05D001074 ORTHO05D001188 3.1e-30 136.0 203 48.3
AL5G29020 Arabidopsis lyrata HOM05D001074 ORTHO05D001188 4.1e-30 135.6 195 48.2
CiPaw.06G045300 Carya illinoinensis HOM05D001074 ORTHO05D001188 4.1e-30 135.6 192 53.6
Potri.012G016900 Populus trichocarpa HOM05D001074 ORTHO05D001188 4.1e-30 135.6 213 45.1
AL6G35760 Arabidopsis lyrata HOM05D001074 ORTHO05D001188 5.3e-30 135.2 202 48.5
Nn3g18953 Nelumbo nucifera HOM05D001074 ORTHO05D001188 5.3e-30 135.2 196 48.5
AT3G49290 Arabidopsis thaliana HOM05D001074 ORTHO05D001188 7.0e-30 134.8 195 48.2
Sp5g12810 Schrenkiella parvula HOM05D001074 ORTHO05D001188 7.0e-30 134.8 195 47.7
Nitab4.5_0000548g0090 Nicotiana tabacum HOM05D001074 ORTHO05D001188 9.1e-30 134.4 193 55.4
Aa31LG11G3550 Aethionema arabicum HOM05D001074 ORTHO05D001188 2.7e-29 132.9 194 47.4
Peaxi162Scf00740g00137 Petunia axillaris HOM05D001074 ORTHO05D001188 3.5e-29 132.5 192 54.7
HanXRQChr05g0144191 Helianthus annuus HOM05D001074 ORTHO05D001188 5.9e-29 131.7 192 49.0
Sabra12G0015500 Salix brachista HOM05D001074 ORTHO05D001188 5.9e-29 131.7 205 45.9
Sed0019891 Sechium edule HOM05D001074 ORTHO05D001188 7.7e-29 131.3 195 51.8
Eucgr.K00391 Eucalyptus grandis HOM05D001074 ORTHO05D001188 1.0e-28 131.0 194 55.2
Gorai.003G121700 Gossypium raimondii HOM05D001074 ORTHO05D001188 1.0e-28 131.0 204 46.1
Manes.05G190200 Manihot esculenta HOM05D001074 ORTHO05D001188 1.0e-28 131.0 193 46.1
THA.LOC104814934 Tarenaya hassleriana HOM05D001074 ORTHO05D001188 1.0e-28 131.0 195 47.2
Carub.0005s1549 Capsella rubella HOM05D001074 ORTHO05D001188 1.7e-28 130.2 195 47.2
TPR.G18774 Trifolium pratense HOM05D001074 ORTHO05D001188 1.7e-28 130.2 193 55.4
Nitab4.5_0005514g0020 Nicotiana tabacum HOM05D001074 ORTHO05D001188 2.9e-28 129.4 193 54.4
Ca_12785_v3 Cicer arietinum L. HOM05D001074 ORTHO05D001188 5.0e-28 128.6 193 54.4
Medtr3g091760 Medicago truncatula HOM05D001074 ORTHO05D001188 5.0e-28 128.6 193 54.4
Carub.0006s2208 Capsella rubella HOM05D001074 ORTHO05D001188 1.5e-27 127.1 200 46.5
CAN.G481.24 Capsicum annuum HOM05D001074 ORTHO05D001188 1.5e-27 127.1 191 53.9
Gohir.D03G115500 Gossypium hirsutum HOM05D001074 ORTHO05D001188 1.5e-27 127.1 204 45.1
Psat5g076160 Pisum sativum HOM05D001074 ORTHO05D001188 1.5e-27 127.1 193 53.4
Solyc03g083030.3 Solanum lycopersicum HOM05D001074 ORTHO05D001188 2.5e-27 126.3 191 53.4
Sopen03g022840 Solanum pennellii HOM05D001074 ORTHO05D001188 2.5e-27 126.3 191 53.4
Gohir.A03G051700 Gossypium hirsutum HOM05D001074 ORTHO05D001188 3.2e-27 125.9 204 45.1
Gohir.A09G184800 Gossypium hirsutum HOM05D001074 ORTHO05D001188 4.2e-27 125.6 200 46.0
BcaB01g00730 Brassica carinata HOM05D001074 ORTHO05D001188 5.5e-27 125.2 195 47.2
Cpa.g.sc3.99 Carica papaya HOM05D001074 ORTHO05D001188 5.5e-27 125.2 194 45.9
PGSC0003DMG400018548 Solanum tuberosum HOM05D001074 ORTHO05D001188 9.4e-27 124.4 191 52.9
Gorai.006G201700 Gossypium raimondii HOM05D001074 ORTHO05D001188 1.2e-26 124.0 201 46.8
TWI14G0212 Tripterygium wilfordii HOM05D001074 ORTHO05D001188 1.2e-26 124.0 198 50.5
AUR62006080 Chenopodium quinoa HOM05D001074 ORTHO05D001188 1.6e-26 123.6 220 42.7
BraA06t24927Z Brassica rapa HOM05D001074 ORTHO05D001188 2.1e-26 123.2 195 48.2
C08p24290 Brassica napus HOM05D001074 ORTHO05D001188 2.7e-26 122.9 195 46.7
BolC8t50045H Brassica oleracea HOM05D001074 ORTHO05D001188 2.7e-26 122.9 195 46.7
CARHR189190 Cardamine hirsuta HOM05D001074 ORTHO05D001188 2.7e-26 122.9 205 46.8
vmacro06391 Vaccinium macrocarpon HOM05D001074 ORTHO05D001188 3.6e-26 122.5 159 58.5
Sp2g23040 Schrenkiella parvula HOM05D001074 ORTHO05D001188 8.0e-26 121.3 193 45.6
A06p18490 Brassica napus HOM05D001074 ORTHO05D001188 1.0e-25 120.9 197 44.7
BcaC07g39398 Brassica carinata HOM05D001074 ORTHO05D001188 1.4e-25 120.6 195 46.2
TAR636G2195 Trochodendron aralioides HOM05D001074 ORTHO05D001188 1.8e-25 120.2 178 46.6
Gohir.D09G179700 Gossypium hirsutum HOM05D001074 ORTHO05D001188 2.3e-25 119.8 201 46.3
Oeu060993.1 Olea europaea HOM05D001074 ORTHO05D001188 5.2e-25 118.6 193 51.3
ECA232G2603 Erigeron canadensis HOM05D001074 ORTHO05D001188 1.5e-24 117.1 185 48.6
SGA_v2.0_scaffold44G16811 Striga asiatica HOM05D001074 ORTHO05D001188 2.6e-24 116.3 194 43.3
Aqoxy7G00062 Aquilegia oxysepala HOM05D001074 ORTHO05D001188 4.4e-24 115.5 181 54.1
HanXRQChr15g0485711 Helianthus annuus HOM05D001074 ORTHO05D001188 7.5e-24 114.8 196 45.9
Oeu037054.1 Olea europaea HOM05D001074 ORTHO05D001188 7.5e-24 114.8 187 49.7
EL10Ac3g05268 Beta vulgaris HOM05D001074 ORTHO05D001188 9.8e-24 114.4 227 40.5
AUR62019414 Chenopodium quinoa HOM05D001074 ORTHO05D001188 1.7e-23 113.6 229 39.7
Thhalv10010561m.g Eutrema salsugineum HOM05D001074 ORTHO05D001188 1.7e-23 113.6 195 43.6
THA.LOC104798904 Tarenaya hassleriana HOM05D001074 ORTHO05D001188 2.8e-23 112.8 196 45.4
Thhalv10004602m.g Eutrema salsugineum HOM05D001074 ORTHO05D001188 3.7e-23 112.5 198 44.4
Aa31LG4G17790 Aethionema arabicum HOM05D001074 ORTHO05D001188 2.4e-22 109.8 194 42.3
Ah.07g205520 Amaranthus hybridus HOM05D001074 ORTHO05D001188 2.0e-21 106.7 213 39.4
BcaNung01222 Brassica carinata HOM05D001074 ORTHO05D001188 2.0e-21 106.7 198 42.4
C07p43460 Brassica napus HOM05D001074 ORTHO05D001188 2.0e-21 106.7 198 42.4
BolC7t44872H Brassica oleracea HOM05D001074 ORTHO05D001188 2.0e-21 106.7 198 42.4
A06p35110 Brassica napus HOM05D001074 ORTHO05D001188 1.0e-20 104.4 194 45.9
Hma1.2p1_3847F.1_g337710 Hydrangea macrophylla HOM05D001074 ORTHO05D001188 2.3e-20 103.2 118 60.2
MBI06_g36470_MAGBIO Magnolia biondii HOM05D001074 ORTHO05D001188 6.6e-20 101.7 183 42.6
Lsat_1_v5_gn_9_49760 Lactuca sativa HOM05D001074 ORTHO05D001188 8.6e-20 101.3 197 44.2
Hund21010 Selenicereus undatus HOM05D001074 ORTHO05D001188 1.1e-19 100.9 196 40.8
Peaxi162Scf00023g00012 Petunia axillaris HOM05D001074 ORTHO05D001188 1.5e-19 100.5 120 65.0
Aqoxy5G04248 Aquilegia oxysepala HOM05D001074 ORTHO05D001188 2.5e-19 99.8 201 44.8
BraA06t26431Z Brassica rapa HOM05D001074 ORTHO05D001188 5.5e-19 98.6 195 45.1
TAR371G1026 Trochodendron aralioides HOM05D001074 ORTHO05D001188 8.0e-18 94.7 178 42.1
Hma1.2p1_0440F.1_g153580 Hydrangea macrophylla HOM05D001074 ORTHO05D001188 1.4e-17 94.0 165 43.0
Aqoxy2G00703 Aquilegia oxysepala HOM05D001074 ORTHO05D001188 8.9e-17 91.3 195 39.5
Dinv35344 Davidia involucrata HOM05D001074 ORTHO05D001188 9.8e-16 87.8 123 48.0
unitig_52.g17716 Utricularia gibba HOM05D001074 ORTHO05D001188 2.8e-15 86.3 197 36.5
Lj3C903G13 Lonicera japonica HOM05D001074 ORTHO05D001188 1.4e-14 84.0 55 80.0
TAR633G2202 Trochodendron aralioides HOM05D001074 ORTHO05D002629 1.2e-13 80.9 137 45.3
TAR633G0488 Trochodendron aralioides HOM05D001074 ORTHO05D001188 2.0e-13 80.1 100 51.0
unitig_92.g28250 Utricularia gibba HOM05D001074 ORTHO05D001188 1.0e-12 77.8 192 39.6
Prupe.5G124400 Prunus persica HOM05D001074 ORTHO05D001188 1.3e-12 77.4 169 38.5
Sabra03G0103400 Salix brachista HOM05D001074 ORTHO05D001188 1.3e-12 77.4 196 35.7
Ah.13g070370 Amaranthus hybridus HOM05D001074 ORTHO05D001188 2.3e-12 76.6 57 70.2
Rhsim03G0209700 Rhododendron simsii HOM05D001074 ORTHO05D001188 2.9e-12 76.3 59 71.2
PSO384G4462 Papaver somniferum HOM05D001074 ORTHO05D001188 3.8e-12 75.9 248 30.6
PSO135G0493 Papaver somniferum HOM05D001074 ORTHO05D001188 8.6e-12 74.7 256 29.3
arahy.Tifrunner.gnm1.ann1.MZEW0G Arachis hypogaea HOM05D001074 ORTHO05D001188 5.6e-11 72.0 56 73.2
Potri.003G142800 Populus trichocarpa HOM05D001074 ORTHO05D001188 1.2e-10 70.9 192 32.8
SGA_v2.0_scaffold192G40530 Striga asiatica HOM05D001074 ORTHO05D001188 1.2e-10 70.9 56 66.1
HPP92_021497 Vanilla planifolia HOM05D001074 ORTHO05D001188 1.2e-10 70.9 196 34.2
HPP92_021523 Vanilla planifolia HOM05D001074 ORTHO05D001188 2.1e-10 70.1 196 34.2
arahy.Tifrunner.gnm1.ann1.B3F4SL Arachis hypogaea HOM05D001074 ORTHO05D001188 3.6e-10 69.3 55 70.9
COL.COLO4_10744 Corchorus olitorius HOM05D001074 ORTHO05D001188 6.1e-10 68.6 144 34.7
PGR042G1177 Punica granatum HOM05D001074 ORTHO05D001188 2.3e-09 66.6 173 33.5
QL02p029619 Quercus lobata HOM05D001074 ORTHO05D001188 2.3e-09 66.6 163 35.6
CiPaw.11G117300 Carya illinoinensis HOM05D001074 ORTHO05D001188 4.0e-09 65.9 180 33.3
Lj8A623T17 Lonicera japonica HOM05D001074 ORTHO05D001188 8.9e-09 64.7 55 63.6
PSO063G3662 Papaver somniferum HOM05D001074 ORTHO05D001188 8.9e-09 64.7 188 44.1
Duzib068G0581 Durio zibethinus HOM05D001074 ORTHO05D001188 1.2e-08 64.3 187 30.5
Dinv37499 Davidia involucrata HOM05D001074 ORTHO05D001188 1.5e-08 63.9 175 32.0
Potri.001G088100 Populus trichocarpa HOM05D001074 ORTHO05D001188 5.8e-08 62.0 192 29.7
unitig_37.g11986 Utricularia gibba HOM05D001074 ORTHO05D001188 5.8e-08 62.0 57 54.4
Sabra01G0064500 Salix brachista HOM05D003558 ORTHO05D004392 9.8e-08 61.2 134 35.8
Cpa.g.sc79.4 Carica papaya HOM05D001074 ORTHO05D001188 1.7e-07 60.5 168 35.7
FAN08G3059 Fragaria x ananassa HOM05D001074 ORTHO05D001188 1.7e-07 60.5 170 33.5
Thecc.03G302400 Theobroma cacao HOM05D001074 ORTHO05D001188 1.7e-07 60.5 146 35.6
MD14G1132900 Malus domestica HOM05D001074 ORTHO05D001188 2.2e-07 60.1 175 33.1
Manes.02G006800 Manihot esculenta HOM05D001074 ORTHO05D001188 2.2e-07 60.1 192 31.2
PSO170G5031 Papaver somniferum HOM05D001074 ORTHO05D001188 3.7e-07 59.3 183 39.9
FAN13G1194 Fragaria x ananassa HOM05D001074 ORTHO05D001188 6.4e-07 58.5 164 32.3
Os01g0551800 Oryza sativa ssp. japonica HOM05D001074 ORTHO05D001188 8.3e-07 58.2 166 31.9
Ciclev10021975m.g Citrus clementina HOM05D001074 ORTHO05D001188 1.1e-06 57.8 145 33.1
FAN04G3039 Fragaria x ananassa HOM05D001074 ORTHO05D001188 1.4e-06 57.4 169 32.0
FvH4_5g11640 Fragaria vesca HOM05D001074 ORTHO05D001188 7.0e-06 55.1 170 30.6
Gohir.A02G095600 Gossypium hirsutum HOM05D001074 ORTHO05D001188 7.0e-06 55.1 142 32.4
Gohir.D03G087800 Gossypium hirsutum HOM05D001074 ORTHO05D001188 7.0e-06 55.1 142 33.1


User provided reference genes

Program Settings