Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_008898 Daucus carota HOM05D006127 ORTHO05D007465 1.7e-288 995.3 512 100.0
Dinv35267 Davidia involucrata HOM05D006127 ORTHO05D007465 4.1e-178 628.6 504 66.1
Gorai.003G069400 Gossypium raimondii HOM05D006127 ORTHO05D007465 2.2e-171 606.3 536 60.4
Prupe.2G302400 Prunus persica HOM05D006127 ORTHO05D007465 2.4e-170 602.8 544 59.9
Gohir.A11G225200 Gossypium hirsutum HOM05D006127 ORTHO05D007465 3.2e-170 602.4 539 59.4
Gohir.D11G229300 Gossypium hirsutum HOM05D006127 ORTHO05D007465 3.2e-170 602.4 536 59.7
TWI23G0320 Tripterygium wilfordii HOM05D006127 ORTHO05D007465 2.7e-169 599.4 542 61.4
CSS0002355 Camellia sinensis var. sinensis HOM05D006127 ORTHO05D007465 5.0e-168 595.1 532 60.7
Thecc.03G186000 Theobroma cacao HOM05D006127 ORTHO05D007465 1.1e-167 594.0 545 59.4
Atru.chr1.338 Acer truncatum HOM05D006127 ORTHO05D007465 7.3e-167 591.3 467 65.3
QL09p012458 Quercus lobata HOM05D006127 ORTHO05D007465 7.3e-167 591.3 467 65.5
COL.COLO4_30292 Corchorus olitorius HOM05D006127 ORTHO05D007465 1.6e-166 590.1 540 59.1
Sabra17G0124200 Salix brachista HOM05D006127 ORTHO05D007465 2.1e-166 589.7 557 57.3
HanXRQChr00c0486g0575011 Helianthus annuus HOM05D006127 ORTHO05D007465 8.0e-166 587.8 553 58.2
MD07G1280200 Malus domestica HOM05D006127 ORTHO05D007465 1.0e-165 587.4 545 59.1
Potri.017G148900 Populus trichocarpa HOM05D006127 ORTHO05D007465 2.3e-165 586.3 553 57.7
Ciclev10004691m.g Citrus clementina HOM05D006127 ORTHO05D007465 1.5e-164 583.6 548 59.7
CSS0021566 Camellia sinensis var. sinensis HOM05D006127 ORTHO05D007465 2.0e-164 583.2 536 59.9
ECA232G4568 Erigeron canadensis HOM05D006127 ORTHO05D007465 2.0e-164 583.2 462 65.8
Manes.06G153500 Manihot esculenta HOM05D006127 ORTHO05D007465 2.0e-164 583.2 555 57.1
Nitab4.5_0000472g0230 Nicotiana tabacum HOM05D006127 ORTHO05D007465 5.8e-164 581.6 467 65.1
TAR374G0777 Trochodendron aralioides HOM05D006127 ORTHO05D007465 4.9e-163 578.6 464 64.0
PGR044G2596 Punica granatum HOM05D006127 ORTHO05D007465 8.3e-163 577.8 549 58.5
Cfa016302 Carpinus fangiana HOM05D006127 ORTHO05D007465 3.2e-162 575.9 547 59.4
Dinv28380 Davidia involucrata HOM05D006127 ORTHO05D007465 2.7e-161 572.8 495 63.4
PGSC0003DMG400009503 Solanum tuberosum HOM05D006127 ORTHO05D007465 6.0e-161 571.6 467 64.5
Actinidia34165 Actinidia chinensis HOM05D006127 ORTHO05D007465 1.0e-160 570.9 542 59.6
Lj1A1007G54 Lonicera japonica HOM05D006127 ORTHO05D007465 1.3e-160 570.5 474 66.0
Potri.004G072100 Populus trichocarpa HOM05D006127 ORTHO05D007465 6.6e-160 568.2 495 60.4
Peaxi162Scf00444g00314 Petunia axillaris HOM05D006127 ORTHO05D007465 1.9e-159 566.6 467 64.7
Solyc03g007620.3 Solanum lycopersicum HOM05D006127 ORTHO05D007465 2.5e-159 566.2 467 63.6
Nitab4.5_0001331g0020 Nicotiana tabacum HOM05D006127 ORTHO05D007465 3.3e-159 565.8 476 63.2
Eucgr.A02719 Eucalyptus grandis HOM05D006127 ORTHO05D007465 7.3e-159 564.7 555 55.5
Sopen03g003570 Solanum pennellii HOM05D006127 ORTHO05D007465 1.2e-158 563.9 467 63.4
CiPaw.06G004100 Carya illinoinensis HOM05D006127 ORTHO05D007465 8.1e-158 561.2 478 62.6
Lsat_1_v5_gn_9_56840 Lactuca sativa HOM05D006127 ORTHO05D007465 2.6e-156 556.2 462 63.6
CAN.G236.3 Capsicum annuum HOM05D006127 ORTHO05D007465 1.3e-155 553.9 467 63.6
CiPaw.05G261300 Carya illinoinensis HOM05D006127 ORTHO05D007465 1.3e-155 553.9 420 65.7
MD01G1210100 Malus domestica HOM05D006127 ORTHO05D007465 1.1e-154 550.8 417 66.4
MSTRG.8699 Avicennia marina HOM05D006127 ORTHO05D007465 1.4e-154 550.4 544 57.0
Oeu003330.1 Olea europaea HOM05D006127 ORTHO05D007465 4.1e-154 548.9 413 67.1
Lalb_Chr01g0009501 Lupinus albus HOM05D006127 ORTHO05D007465 1.2e-153 547.4 529 56.7
THA.LOC104818243 Tarenaya hassleriana HOM05D006127 ORTHO05D007465 1.2e-153 547.4 511 57.1
Glyma.09G129300 Glycine max HOM05D006127 ORTHO05D007465 1.3e-152 543.9 541 56.4
Gohir.D09G177600 Gossypium hirsutum HOM05D006127 ORTHO05D007465 1.7e-152 543.5 534 56.0
AL8G39630 Arabidopsis lyrata HOM05D006127 ORTHO05D007465 3.0e-152 542.7 531 58.0
Aa31LG11G990 Aethionema arabicum HOM05D006127 ORTHO05D007465 3.9e-152 542.3 474 62.0
Gorai.006G199600 Gossypium raimondii HOM05D006127 ORTHO05D007465 3.9e-152 542.3 532 56.0
CsaV3_5G001020 Cucumis sativus L. HOM05D006127 ORTHO05D007465 5.1e-152 542.0 557 55.1
Cc02_g02250 Coffea canephora HOM05D006127 ORTHO05D007465 1.1e-151 540.8 414 67.1
Sc13g0009280 Simmondsia chinensis HOM05D006127 ORTHO05D007465 1.5e-151 540.4 468 60.5
MELO3C005842.2 Cucumis melo HOM05D006127 ORTHO05D007465 1.9e-151 540.0 464 61.2
Sp2g25830 Schrenkiella parvula HOM05D006127 ORTHO05D007465 1.9e-151 540.0 524 57.8
AT5G62650 Arabidopsis thaliana HOM05D006127 ORTHO05D007465 2.5e-151 539.7 527 58.6
Thhalv10003967m.g Eutrema salsugineum HOM05D006127 ORTHO05D007465 2.5e-151 539.7 525 58.5
Lj2g0027649 Lotus japonicus HOM05D006127 ORTHO05D007465 2.5e-151 539.7 458 61.1
Migut.F00277 Erythranthe guttata HOM05D006127 ORTHO05D007465 3.3e-151 539.3 564 55.5
RcHm_v2.0_Chr1g0378611 Rosa chinensis HOM05D006127 ORTHO05D007465 9.5e-151 537.7 551 55.5
Carub.0008s2341 Capsella rubella HOM05D006127 ORTHO05D007465 4.7e-150 535.4 523 57.9
PSO478G4852 Papaver somniferum HOM05D006127 ORTHO05D007465 4.7e-150 535.4 465 60.0
Ca_26803_v3 Cicer arietinum L. HOM05D006127 ORTHO05D007465 1.1e-149 534.3 544 54.6
FAN03G3352 Fragaria x ananassa HOM05D006127 ORTHO05D007465 3.1e-149 532.7 462 60.8
Phvul.004G105900 Phaseolus vulgaris HOM05D006127 ORTHO05D007465 3.1e-149 532.7 542 55.2
ClCG01G000890 Citrullus lanatus HOM05D006127 ORTHO05D007465 5.2e-149 531.9 493 59.0
FAN10G2357 Fragaria x ananassa HOM05D006127 ORTHO05D007465 5.2e-149 531.9 485 58.6
FAN03G2078 Fragaria x ananassa HOM05D006127 ORTHO05D007465 8.9e-149 531.2 462 60.6
FAN06G3350 Fragaria x ananassa HOM05D006127 ORTHO05D007465 1.5e-148 530.4 535 55.7
FAN10G0315 Fragaria x ananassa HOM05D006127 ORTHO05D007465 1.5e-148 530.4 485 58.4
CARHR276460 Cardamine hirsuta HOM05D006127 ORTHO05D007465 2.6e-148 529.6 536 56.0
FAN06G1782 Fragaria x ananassa HOM05D006127 ORTHO05D007465 2.6e-148 529.6 535 55.7
Gohir.A09G182900 Gossypium hirsutum HOM05D006127 ORTHO05D007465 3.4e-148 529.3 521 56.6
PSO266G0017 Papaver somniferum HOM05D006127 ORTHO05D007465 1.7e-147 526.9 465 58.9
Medtr6g053110 Medicago truncatula HOM05D006127 ORTHO05D007465 2.9e-147 526.2 553 55.3
Sabra04G0047500 Salix brachista HOM05D006127 ORTHO05D007465 6.4e-147 525.0 608 50.2
Sed0008008 Sechium edule HOM05D006127 ORTHO05D007465 1.1e-146 524.2 464 59.3
HanXRQChr15g0494171 Helianthus annuus HOM05D006127 ORTHO05D007465 3.0e-144 516.2 525 55.4
BraA06t25889Z Brassica rapa HOM05D006127 ORTHO05D007465 5.1e-144 515.4 525 56.2
BcaC01g02503 Brassica carinata HOM05D006127 ORTHO05D007465 6.6e-144 515.0 525 56.2
BolC3t18667H Brassica oleracea HOM05D006127 ORTHO05D007465 1.5e-143 513.8 521 56.0
BcaB02g09667 Brassica carinata HOM05D006127 ORTHO05D007465 2.5e-143 513.1 521 55.7
C03p64120 Brassica napus HOM05D006127 ORTHO05D007465 2.5e-143 513.1 521 56.0
A06p29390 Brassica napus HOM05D006127 ORTHO05D007465 5.6e-143 511.9 527 56.0
Nn6g32416 Nelumbo nucifera HOM05D006127 ORTHO05D007465 4.7e-142 508.8 469 58.8
Aqoxy7G00200 Aquilegia oxysepala HOM05D006127 ORTHO05D007465 8.9e-141 504.6 449 60.1
Haze_00059 Corylus avellana HOM05D006127 ORTHO05D007465 8.9e-141 504.6 543 54.3
AUR62031438 Chenopodium quinoa HOM05D006127 ORTHO05D007465 2.0e-140 503.4 463 59.6
unitig_747.g21859 Utricularia gibba HOM05D006127 ORTHO05D007465 5.8e-140 501.9 545 52.7
EL10Ac3g05405 Beta vulgaris HOM05D006127 ORTHO05D007465 1.3e-139 500.7 470 58.9
arahy.Tifrunner.gnm1.ann1.HXNP43 Arachis hypogaea HOM05D006127 ORTHO05D007465 3.5e-137 492.7 540 52.8
GSVIVG01028824001 Vitis vinifera HOM05D006127 ORTHO05D007465 6.0e-137 491.9 415 60.5
Glyma.16G177100 Glycine max HOM05D006127 ORTHO05D007465 1.7e-136 490.3 542 52.4
arahy.Tifrunner.gnm1.ann1.AR9FJK Arachis hypogaea HOM05D006127 ORTHO05D007465 1.5e-135 487.3 562 51.1
Ah.13g069260 Amaranthus hybridus HOM05D006127 ORTHO05D007465 6.2e-134 481.9 409 60.6
Cpa.g.sc107.127 Carica papaya HOM05D006127 ORTHO05D007465 3.4e-132 476.1 429 59.0
SGA_v2.0_scaffold60G21123 Striga asiatica HOM05D006127 ORTHO05D007465 4.9e-131 472.2 540 51.5
Hund04798 Selenicereus undatus HOM05D006127 ORTHO05D007465 6.4e-131 471.9 463 55.9
ATR0721G168 Amborella trichopoda HOM05D006127 ORTHO05D007465 8.7e-128 461.5 457 55.4
AUR62021102 Chenopodium quinoa HOM05D006127 ORTHO05D007465 4.5e-124 449.1 437 56.8
Ah.07g206460 Amaranthus hybridus HOM05D006127 ORTHO05D007465 5.8e-124 448.7 547 49.5
Zm00001eb119480 Zea mays HOM05D006127 ORTHO05D007465 3.8e-123 446.0 537 49.3
vmacro06616 Vaccinium macrocarpon HOM05D006127 ORTHO05D007465 2.1e-121 440.3 487 52.0
CDE04G3725 Ceratophyllum demersum HOM05D006127 ORTHO05D007465 2.7e-121 439.9 457 51.9
HPP92_008801 Vanilla planifolia HOM05D006127 ORTHO05D007465 1.5e-119 434.1 461 52.1
Rhsim03G0192200 Rhododendron simsii HOM05D006127 ORTHO05D007465 1.9e-119 433.7 541 48.8
TPR.G9177 Trifolium pratense HOM05D006127 ORTHO05D007465 1.7e-115 420.6 298 71.8
Psat0s2186g0040 Pisum sativum HOM05D006127 ORTHO05D007465 5.1e-112 409.1 306 68.6
FvH4_7g30450 Fragaria vesca HOM05D006127 ORTHO05D007465 2.6e-108 396.7 367 59.7
HPP92_005266 Vanilla planifolia HOM05D006127 ORTHO05D007465 2.4e-101 373.6 378 54.5
Oeu027861.1 Olea europaea HOM05D006127 ORTHO05D007465 5.5e-90 335.9 420 50.2
Nn1g01683 Nelumbo nucifera HOM05D006127 ORTHO05D007465 2.2e-86 323.9 471 43.3
BcaB02g09671 Brassica carinata HOM05D006127 ORTHO05D007465 2.9e-83 313.5 465 45.2
VMungo0464G0768 Vigna mungo HOM05D006127 ORTHO05D007465 6.1e-81 305.8 315 56.2
SGA_v2.0_scaffold192G40622 Striga asiatica HOM05D006127 ORTHO05D007465 2.3e-80 303.9 224 67.9
CDE03G0317 Ceratophyllum demersum HOM05D006127 ORTHO05D007465 4.1e-77 293.1 265 55.1
Os01g0225300 Oryza sativa ssp. japonica HOM05D006127 ORTHO05D007465 4.1e-69 266.5 282 52.5
Mapoly0009s0032 Marchantia polymorpha HOM05D006127 ORTHO05D007465 1.6e-60 238.0 432 35.6
AagrBONN_evm.TU.Sc2ySwM_368.2100 Anthoceros agrestis HOM05D006127 ORTHO05D007465 2.9e-59 233.8 424 34.7
FAN01G1207 Fragaria x ananassa HOM05D006127 ORTHO05D007465 3.9e-51 206.8 244 51.6
Pp3c17_22580 Physcomitrium patens HOM05D006127 ORTHO05D007465 1.4e-48 198.4 413 32.7
arahy.Tifrunner.gnm1.ann1.KML1I1 Arachis hypogaea HOM05D006127 ORTHO05D007465 3.6e-41 173.7 250 42.4
AL8G39600 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.7e-35 154.8 95 80.0
Cfa002216 Carpinus fangiana HOM05D006127 ORTHO05D007465 1.4e-32 145.2 242 41.3
SEGI_03634 Sequoiadendron giganteum HOM05D006127 ORTHO05D007465 1.8e-32 144.8 177 44.6
SMO266G0103 Selaginella moellendorffii HOM05D006127 ORTHO05D007465 3.4e-31 140.6 192 37.5
TPR.G27774 Trifolium pratense HOM05D006127 ORTHO05D007465 1.3e-27 128.6 175 42.3
COL.COLO4_36023 Corchorus olitorius HOM05D006127 ORTHO05D161883 3.1e-24 117.5 62 85.5
TPR.G9175 Trifolium pratense HOM05D006127 ORTHO05D007465 4.4e-23 113.6 80 66.2
SEGI_25179 Sequoiadendron giganteum HOM05D006127 ORTHO05D007465 8.4e-06 56.2 82 41.5


User provided reference genes

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