Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_008890 Daucus carota HOM05D005877 ORTHO05D010356 4.8e-60 234.2 110 100.0
DCAR_024374 Daucus carota HOM05D005877 ORTHO05D010356 1.4e-59 232.6 110 98.2
DCAR_024959 Daucus carota HOM05D000679 ORTHO05D000137 1.2e-18 96.7 93 46.2
DCAR_010080 Daucus carota HOM05D000679 ORTHO05D000137 3.5e-18 95.1 88 47.7
DCAR_018395 Daucus carota HOM05D000679 ORTHO05D000137 1.3e-17 93.2 85 48.2
Nitab4.5_0007888g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000137 6.4e-12 74.3 94 40.4
Nitab4.5_0013951g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 9.3e-11 70.5 95 38.9
Nitab4.5_0004809g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.1e-10 69.3 91 39.6
Nitab4.5_0011140g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.1e-10 69.3 93 39.8
Nitab4.5_0001140g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000482 2.7e-10 68.9 95 37.9
Nitab4.5_0002879g0090 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.7e-10 68.9 95 37.9
Nitab4.5_0013025g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 6.0e-10 67.8 95 38.9
Nitab4.5_0001446g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 7.8e-10 67.4 95 36.8
Nitab4.5_0000207g0350 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.3e-09 65.9 92 39.1
Nitab4.5_0023553g0010 Nicotiana tabacum HOM05D005877 ORTHO05D010356 2.3e-09 65.9 95 34.7
Nitab4.5_0004496g0060 Nicotiana tabacum HOM05D000679 ORTHO05D000137 3.0e-09 65.5 95 37.9
Nitab4.5_0002495g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000137 3.9e-09 65.1 95 36.8
Nitab4.5_0004850g0030 Nicotiana tabacum HOM05D005877 ORTHO05D010356 3.9e-09 65.1 100 33.0
Nitab4.5_0009017g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000137 3.9e-09 65.1 93 37.6
Nitab4.5_0001472g0100 Nicotiana tabacum HOM05D000679 ORTHO05D000137 8.7e-09 63.9 95 35.8
Nitab4.5_0001878g0030 Nicotiana tabacum HOM05D005877 ORTHO05D010356 8.7e-09 63.9 90 32.2
Nitab4.5_0026057g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 8.7e-09 63.9 93 37.6
Nitab4.5_0003934g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.1e-08 63.5 96 36.5
Nitab4.5_0014346g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.1e-08 63.5 96 35.4
Nitab4.5_0000347g0110 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.5e-08 63.2 95 34.7
Nitab4.5_0008423g0020 Nicotiana tabacum HOM05D005877 ORTHO05D000482 1.5e-08 63.2 100 31.0
Nitab4.5_0006628g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.9e-08 62.8 95 36.8
Nitab4.5_0019527g0010 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.9e-08 62.8 71 33.8
Nitab4.5_0000884g0100 Nicotiana tabacum HOM05D005877 ORTHO05D010356 2.5e-08 62.4 97 32.0
Nitab4.5_0001329g0160 Nicotiana tabacum HOM05D005877 ORTHO05D010356 2.5e-08 62.4 93 32.3
Nitab4.5_0004192g0010 Nicotiana tabacum HOM05D006812 ORTHO05D000482 2.5e-08 62.4 101 32.7
Nitab4.5_0008288g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.5e-08 62.4 93 36.6
Nitab4.5_0022061g0010 Nicotiana tabacum HOM05D005877 ORTHO05D010356 2.5e-08 62.4 91 34.1
Nitab4.5_0000036g0370 Nicotiana tabacum HOM05D005063 ORTHO05D010498 3.3e-08 62.0 78 32.1
Nitab4.5_0004308g0010 Nicotiana tabacum HOM05D005877 ORTHO05D010356 3.3e-08 62.0 100 31.0
Nitab4.5_0004824g0060 Nicotiana tabacum HOM05D005877 ORTHO05D010356 3.3e-08 62.0 100 30.0
Nitab4.5_0007600g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 3.3e-08 62.0 95 33.7
Nitab4.5_0008167g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000137 3.3e-08 62.0 95 40.0
Nitab4.5_0011890g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 3.3e-08 62.0 95 35.8
Nitab4.5_0025549g0010 Nicotiana tabacum HOM05D005877 ORTHO05D010356 3.3e-08 62.0 94 30.9
CAN.G1302.4 Capsicum annuum HOM05D000541 ORTHO05D000137 5.6e-08 61.2 101 35.6
Nitab4.5_0011643g0020 Nicotiana tabacum HOM05D005877 ORTHO05D010356 5.6e-08 61.2 97 33.0
Nitab4.5_0015150g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 5.6e-08 61.2 88 38.6
Solyc04g071380.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 5.6e-08 61.2 108 32.4
Nitab4.5_0000098g0180 Nicotiana tabacum HOM05D002262 ORTHO05D000482 7.3e-08 60.8 72 40.3
Nitab4.5_0000231g0400 Nicotiana tabacum HOM05D005877 ORTHO05D010356 7.3e-08 60.8 91 33.0
Nitab4.5_0008587g0040 Nicotiana tabacum HOM05D005877 ORTHO05D010356 7.3e-08 60.8 97 30.9
Nitab4.5_0011961g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 7.3e-08 60.8 69 34.8
Nitab4.5_0000477g0030 Nicotiana tabacum HOM05D005063 ORTHO05D000482 9.6e-08 60.5 71 33.8
Nitab4.5_0001843g0200 Nicotiana tabacum HOM05D002262 ORTHO05D000137 9.6e-08 60.5 93 38.7
Nitab4.5_0010898g0010 Nicotiana tabacum HOM05D008108 ORTHO05D000137 9.6e-08 60.5 98 34.7
Nitab4.5_0018223g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000137 9.6e-08 60.5 96 34.4
CAN.G954.17 Capsicum annuum HOM05D000541 ORTHO05D000137 1.3e-07 60.1 101 35.6
Nitab4.5_0000814g0130 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.3e-07 60.1 95 34.7
Nitab4.5_0001299g0110 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.3e-07 60.1 75 38.7
Nitab4.5_0002052g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.3e-07 60.1 79 39.2
Nitab4.5_0008647g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000482 1.3e-07 60.1 95 36.8
CAN.G184.46 Capsicum annuum HOM05D000541 ORTHO05D000137 1.6e-07 59.7 102 36.3
Nitab4.5_0000477g0180 Nicotiana tabacum HOM05D005063 ORTHO05D000137 1.6e-07 59.7 71 33.8
Nitab4.5_0004143g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.6e-07 59.7 95 33.7
Nitab4.5_0015310g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.6e-07 59.7 93 34.4
Nitab4.5_0000044g0080 Nicotiana tabacum HOM05D005063 ORTHO05D000137 2.1e-07 59.3 93 29.0
Nitab4.5_0004917g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.1e-07 59.3 95 35.8
CAN.G68.14 Capsicum annuum HOM05D000541 ORTHO05D000137 3.6e-07 58.5 102 35.3
Nitab4.5_0002279g0010 Nicotiana tabacum HOM05D005063 ORTHO05D000482 3.6e-07 58.5 71 33.8
Nitab4.5_0000026g0260 Nicotiana tabacum HOM05D002262 ORTHO05D000137 4.8e-07 58.2 96 36.5
Nitab4.5_0013596g0030 Nicotiana tabacum HOM05D005063 ORTHO05D000482 4.8e-07 58.2 71 33.8
Nitab4.5_0000228g0040 Nicotiana tabacum HOM05D005063 ORTHO05D010498 6.2e-07 57.8 96 29.2
Nitab4.5_0002311g0170 Nicotiana tabacum HOM05D002262 ORTHO05D000137 6.2e-07 57.8 75 37.3
SGA_v2.0_scaffold240G44055 Striga asiatica HOM05D000679 ORTHO05D000137 6.2e-07 57.8 96 35.4
SGA_v2.0_scaffold2G00971 Striga asiatica HOM05D000679 ORTHO05D000137 6.2e-07 57.8 96 33.3
CANSAT80G0449 Cannabis sativa HOM05D008721 ORTHO05D000137 8.1e-07 57.4 99 31.3
CAN.G8.9 Capsicum annuum HOM05D000541 ORTHO05D000137 8.1e-07 57.4 102 35.3
Nitab4.5_0001725g0060 Nicotiana tabacum HOM05D006812 ORTHO05D000137 8.1e-07 57.4 101 27.7
CANSAT21G0858 Cannabis sativa HOM05D008721 ORTHO05D000137 1.1e-06 57.0 80 35.0
CANSAT25G0487 Cannabis sativa HOM05D008721 ORTHO05D000137 1.1e-06 57.0 72 36.1
Nitab4.5_0011972g0010 Nicotiana tabacum HOM05D008108 ORTHO05D000137 1.1e-06 57.0 102 31.4
ATR0441G001 Amborella trichopoda HOM05D008721 ORTHO05D000137 1.4e-06 56.6 72 36.1
CANSAT54G1761 Cannabis sativa HOM05D008721 ORTHO05D000137 1.4e-06 56.6 72 36.1
CANSAT80G1051 Cannabis sativa HOM05D008721 ORTHO05D000137 1.4e-06 56.6 72 36.1
Nitab4.5_0001863g0140 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.4e-06 56.6 69 31.9
Nitab4.5_0003134g0170 Nicotiana tabacum HOM05D008108 ORTHO05D011004 1.4e-06 56.6 96 32.3
Nitab4.5_0005900g0130 Nicotiana tabacum HOM05D005877 ORTHO05D010356 1.4e-06 56.6 97 29.9
Nitab4.5_0006936g0060 Nicotiana tabacum HOM05D005877 ORTHO05D010356 1.4e-06 56.6 74 35.1
CAN.G1299.4 Capsicum annuum HOM05D000541 ORTHO05D000137 1.8e-06 56.2 96 34.4
CAN.G89.22 Capsicum annuum HOM05D000679 ORTHO05D000137 1.8e-06 56.2 94 27.7
CAN.G532.26 Capsicum annuum HOM05D000541 ORTHO05D000137 2.4e-06 55.8 87 29.9
Nitab4.5_0000500g0070 Nicotiana tabacum HOM05D008108 ORTHO05D000137 2.4e-06 55.8 96 33.3
Nitab4.5_0009150g0060 Nicotiana tabacum HOM05D006812 ORTHO05D000137 2.4e-06 55.8 101 28.7
CAN.G199.44 Capsicum annuum HOM05D000541 ORTHO05D000137 3.1e-06 55.5 102 34.3
CAN.G625.33 Capsicum annuum HOM05D000541 ORTHO05D000137 3.1e-06 55.5 102 33.3
Nitab4.5_0013004g0020 Nicotiana tabacum HOM05D005877 ORTHO05D010356 3.1e-06 55.5 80 32.5
CAN.G1181.32 Capsicum annuum HOM05D000541 ORTHO05D000137 4.0e-06 55.1 112 32.1
CAN.G1273.10 Capsicum annuum HOM05D000679 ORTHO05D000137 4.0e-06 55.1 94 27.7
CAN.G266.2 Capsicum annuum HOM05D000541 ORTHO05D000137 4.0e-06 55.1 102 34.3
Nitab4.5_0001927g0120 Nicotiana tabacum HOM05D005063 ORTHO05D010498 4.0e-06 55.1 71 31.0
CAN.G1855.2 Capsicum annuum HOM05D000541 ORTHO05D000137 5.3e-06 54.7 90 34.4
CAN.G773.9 Capsicum annuum HOM05D000541 ORTHO05D000137 5.3e-06 54.7 96 36.5
DCAR_029854 Daucus carota HOM05D002749 ORTHO05D000137 5.3e-06 54.7 37 62.2
Nitab4.5_0001889g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000137 5.3e-06 54.7 102 32.4
Nitab4.5_0003768g0070 Nicotiana tabacum HOM05D005877 ORTHO05D010356 5.3e-06 54.7 76 31.6
CAN.G126.36 Capsicum annuum HOM05D000541 ORTHO05D000137 6.9e-06 54.3 99 33.3
CAN.G169.9 Capsicum annuum HOM05D000541 ORTHO05D000137 6.9e-06 54.3 102 35.3
Nitab4.5_0008167g0050 Nicotiana tabacum HOM05D000679 ORTHO05D000137 6.9e-06 54.3 71 32.4
CAN.G1026.6 Capsicum annuum HOM05D000541 ORTHO05D000137 9.0e-06 53.9 99 32.3
Nitab4.5_0009415g0010 Nicotiana tabacum HOM05D008108 ORTHO05D000137 9.0e-06 53.9 91 28.6
PGSC0003DMG400023258 Solanum tuberosum HOM05D000541 ORTHO05D000137 9.0e-06 53.9 93 31.2


User provided reference genes

Program Settings