Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_008870 Daucus carota HOM05D006568 ORTHO05D008342 9.1e-295 1016.1 511 100.0
CSS0018949 Camellia sinensis var. sinensis HOM05D006568 ORTHO05D008342 1.4e-186 656.8 530 66.6
Peaxi162Scf00391g00111 Petunia axillaris HOM05D006568 ORTHO05D008342 2.5e-183 646.0 521 66.2
Cc06_g07460 Coffea canephora HOM05D006568 ORTHO05D008342 2.8e-179 632.5 521 65.5
Rhsim03G0254700 Rhododendron simsii HOM05D006568 ORTHO05D008342 5.4e-178 628.2 523 65.2
Nitab4.5_0001021g0090 Nicotiana tabacum HOM05D006568 ORTHO05D008342 4.2e-175 618.6 536 63.4
Oeu028734.1 Olea europaea HOM05D006568 ORTHO05D008342 4.1e-170 602.1 502 64.3
Duzib150G1168 Durio zibethinus HOM05D006568 ORTHO05D008342 2.7e-169 599.4 535 61.5
Nitab4.5_0001555g0100 Nicotiana tabacum HOM05D006568 ORTHO05D008342 6.6e-168 594.7 526 62.0
CiPaw.15G182900 Carya illinoinensis HOM05D006568 ORTHO05D008342 1.1e-167 594.0 505 64.4
CANSAT11G1359 Cannabis sativa HOM05D006568 ORTHO05D008342 1.9e-167 593.2 515 62.7
Haze_19324 Corylus avellana HOM05D006568 ORTHO05D008342 7.3e-167 591.3 548 59.7
PGSC0003DMG400030734 Solanum tuberosum HOM05D006568 ORTHO05D008342 7.3e-167 591.3 502 64.3
CAN.G518.23 Capsicum annuum HOM05D006568 ORTHO05D008342 1.2e-166 590.5 501 64.1
Solyc07g007190.3 Solanum lycopersicum HOM05D006568 ORTHO05D008342 2.8e-166 589.3 499 64.7
Atru.chr7.233 Acer truncatum HOM05D006568 ORTHO05D008342 8.9e-165 584.3 531 62.1
Cfa020897 Carpinus fangiana HOM05D006568 ORTHO05D008342 3.4e-164 582.4 511 62.2
QL02p091184 Quercus lobata HOM05D006568 ORTHO05D008342 3.4e-164 582.4 511 63.6
TWI63G0031 Tripterygium wilfordii HOM05D006568 ORTHO05D008342 3.4e-164 582.4 536 60.1
vmacro06105 Vaccinium macrocarpon HOM05D006568 ORTHO05D000801 3.4e-164 582.4 535 61.1
Thecc.09G141200 Theobroma cacao HOM05D006568 ORTHO05D008342 1.3e-163 580.5 513 62.0
Ciclev10007895m.g Citrus clementina HOM05D006568 ORTHO05D008342 1.7e-163 580.1 516 61.8
Potri.018G114600 Populus trichocarpa HOM05D006568 ORTHO05D008342 2.2e-163 579.7 536 62.1
Sopen07g003240 Solanum pennellii HOM05D006568 ORTHO05D008342 8.3e-163 577.8 499 63.5
COL.COLO4_24111 Corchorus olitorius HOM05D006568 ORTHO05D008342 4.1e-162 575.5 506 62.1
Eucgr.C00440 Eucalyptus grandis HOM05D006568 ORTHO05D008342 4.1e-162 575.5 505 61.4
GSVIVG01012889001 Vitis vinifera HOM05D006568 ORTHO05D008342 1.2e-161 573.9 522 60.7
Sabra18G0097500 Salix brachista HOM05D006568 ORTHO05D008342 4.6e-161 572.0 510 62.0
Prupe.7G255100 Prunus persica HOM05D006568 ORTHO05D008342 2.8e-158 562.8 514 61.5
Duzib168G0355 Durio zibethinus HOM05D006568 ORTHO05D008342 5.2e-157 558.5 512 60.7
Glyma.17G105400 Glycine max HOM05D006568 ORTHO05D008342 5.2e-157 558.5 495 62.6
Glyma.13G165600 Glycine max HOM05D006568 ORTHO05D008342 1.5e-156 557.0 496 62.7
Aqoxy7G03538 Aquilegia oxysepala HOM05D006568 ORTHO05D008342 3.7e-155 552.4 498 61.0
Manes.14G138200 Manihot esculenta HOM05D006568 ORTHO05D008342 1.9e-154 550.1 555 56.8
RcHm_v2.0_Chr2g0086721 Rosa chinensis HOM05D006568 ORTHO05D008342 2.4e-154 549.7 505 61.0
Gorai.010G056500 Gossypium raimondii HOM05D006568 ORTHO05D008342 4.1e-154 548.9 528 57.4
Gohir.D06G049600 Gossypium hirsutum HOM05D006568 ORTHO05D008342 3.5e-153 545.8 528 57.6
Gohir.A06G050300 Gossypium hirsutum HOM05D006568 ORTHO05D008342 4.6e-153 545.4 500 59.6
Cpa.g.sc46.84 Carica papaya HOM05D006568 ORTHO05D008342 1.3e-152 543.9 518 58.9
FvH4_1g01760 Fragaria vesca HOM05D006568 ORTHO05D008342 6.6e-152 541.6 503 60.2
MD02G1013300 Malus domestica HOM05D006568 ORTHO05D008342 2.5e-151 539.7 509 60.5
FAN19G0856 Fragaria x ananassa HOM05D006568 ORTHO05D008342 3.3e-151 539.3 503 60.0
Lj3C820G3 Lonicera japonica HOM05D006568 ORTHO05D008342 7.3e-151 538.1 516 59.1
FAN26G2488 Fragaria x ananassa HOM05D006568 ORTHO05D008342 9.5e-151 537.7 506 60.1
MD15G1160100 Malus domestica HOM05D006568 ORTHO05D008342 1.2e-150 537.3 509 58.9
FAN28G1334 Fragaria x ananassa HOM05D006568 ORTHO05D008342 1.6e-150 537.0 503 60.0
Lj3A817T81 Lonicera japonica HOM05D006568 ORTHO05D008342 2.6e-148 529.6 507 58.8
VMungo1215G2753 Vigna mungo HOM05D006568 ORTHO05D008342 5.8e-148 528.5 516 57.6
Hma1.2p1_0182F.1_g080440 Hydrangea macrophylla HOM05D006568 ORTHO05D008342 2.2e-147 526.6 590 52.9
Potri.006G190400 Populus trichocarpa HOM05D006568 ORTHO05D008342 3.7e-147 525.8 532 57.9
Phvul.003G174400 Phaseolus vulgaris HOM05D006568 ORTHO05D008342 8.3e-147 524.6 517 58.2
Medtr4g116470 Medicago truncatula HOM05D006568 ORTHO05D008342 7.8e-145 518.1 514 54.7
Dinv42917 Davidia involucrata HOM05D006568 ORTHO05D008342 5.1e-144 515.4 535 55.7
Dinv43183 Davidia involucrata HOM05D006568 ORTHO05D008342 5.1e-144 515.4 535 55.7
ClCG06G011990 Citrullus lanatus HOM05D006568 ORTHO05D008342 1.9e-143 513.5 529 55.2
Lj4g0026005 Lotus japonicus HOM05D006568 ORTHO05D008342 4.3e-143 512.3 525 55.8
TPR.G15810 Trifolium pratense HOM05D006568 ORTHO05D008342 3.6e-142 509.2 521 55.5
PGR142G1115 Punica granatum HOM05D006568 ORTHO05D008342 1.4e-141 507.3 497 58.4
CsaV3_1G028460 Cucumis sativus L. HOM05D006568 ORTHO05D008342 4.0e-141 505.8 507 55.8
Hund21609 Selenicereus undatus HOM05D006568 ORTHO05D008342 6.8e-141 505.0 525 56.8
Nn2g12241 Nelumbo nucifera HOM05D006568 ORTHO05D008342 5.8e-140 501.9 506 55.3
Ca_21616_v3 Cicer arietinum L. HOM05D006568 ORTHO05D008342 2.2e-139 500.0 519 56.3
MELO3C010267.2 Cucumis melo HOM05D006568 ORTHO05D008342 6.4e-139 498.4 527 54.3
Oeu040792.1 Olea europaea HOM05D006568 ORTHO05D008342 2.5e-135 486.5 413 63.9
AUR62041444 Chenopodium quinoa HOM05D006568 ORTHO05D008342 9.6e-135 484.6 491 58.0
Migut.K00383 Erythranthe guttata HOM05D006568 ORTHO05D008342 1.4e-133 480.7 500 55.4
AUR62011262 Chenopodium quinoa HOM05D006568 ORTHO05D008342 4.0e-133 479.2 479 58.7
Ah.14g078680 Amaranthus hybridus HOM05D006568 ORTHO05D008342 6.9e-133 478.4 491 56.4
Sed0017332 Sechium edule HOM05D006568 ORTHO05D008342 6.4e-131 471.9 546 51.1
Lalb_Chr12g0198501 Lupinus albus HOM05D006568 ORTHO05D008342 4.2e-130 469.2 518 53.7
MSTRG.26320 Avicennia marina HOM05D006568 ORTHO05D008342 1.2e-129 467.6 510 52.5
FAN23G2119 Fragaria x ananassa HOM05D006568 ORTHO05D008342 1.3e-128 464.2 505 54.9
MSTRG.6088 Avicennia marina HOM05D006568 ORTHO05D008342 3.0e-128 463.0 474 55.7
HanXRQChr03g0063991 Helianthus annuus HOM05D006568 ORTHO05D008342 5.1e-128 462.2 492 54.5
Nn8g39711 Nelumbo nucifera HOM05D006568 ORTHO05D008342 3.3e-127 459.5 443 57.8
arahy.Tifrunner.gnm1.ann1.XD5HYR Arachis hypogaea HOM05D006568 ORTHO05D008342 4.0e-125 452.6 512 53.7
EL10Ac8g18826 Beta vulgaris HOM05D006568 ORTHO05D008342 4.5e-124 449.1 497 52.5
arahy.Tifrunner.gnm1.ann1.9W3K41 Arachis hypogaea HOM05D006568 ORTHO05D008342 2.2e-123 446.8 525 52.8
ECA240G0509 Erigeron canadensis HOM05D006568 ORTHO05D008342 3.8e-123 446.0 494 53.4
SalBow1G3333 Salvia bowleyana HOM05D006568 ORTHO05D008342 8.4e-123 444.9 485 51.8
Dinv41428 Davidia involucrata HOM05D006568 ORTHO05D008342 2.7e-121 439.9 344 69.5
MBI15_g47023_MAGBIO Magnolia biondii HOM05D006568 ORTHO05D008342 7.9e-121 438.3 503 52.1
Dinv22137 Davidia involucrata HOM05D006568 ORTHO05D008342 3.7e-118 429.5 457 54.7
Sed0011467 Sechium edule HOM05D006568 ORTHO05D008342 3.5e-113 412.9 496 50.4
ATR0629G030 Amborella trichopoda HOM05D006568 ORTHO05D008342 1.3e-112 411.0 521 47.4
SalBow1G7296 Salvia bowleyana HOM05D006568 ORTHO05D008342 8.4e-107 391.7 514 47.1
Lalb_Chr11g0072971 Lupinus albus HOM05D006568 ORTHO05D008342 2.5e-106 390.2 497 48.1
Psat4g033400 Pisum sativum HOM05D006568 ORTHO05D008342 1.3e-104 384.4 410 56.1
Migut.J01268 Erythranthe guttata HOM05D006568 ORTHO05D008342 4.8e-102 375.9 495 48.9
SHI03244 Sapria himalayana HOM05D006568 ORTHO05D008342 3.4e-100 369.8 490 45.1
Lsat_1_v5_gn_7_47940 Lactuca sativa HOM05D006568 ORTHO05D008342 2.2e-99 367.1 508 46.5
Glyma.15G201700 Glycine max HOM05D006568 ORTHO05D008342 6.5e-91 339.0 504 45.8
TAR636G2103 Trochodendron aralioides HOM05D006568 ORTHO05D008342 1.9e-90 337.4 302 59.3
Actinidia26349 Actinidia chinensis HOM05D006568 ORTHO05D008342 1.6e-89 334.3 327 58.7
Lj6g0005589 Lotus japonicus HOM05D006568 ORTHO05D008342 2.6e-87 327.0 518 43.2
Phvul.009G209900 Phaseolus vulgaris HOM05D006568 ORTHO05D008342 5.7e-87 325.9 522 42.0
HPP92_005342 Vanilla planifolia HOM05D006568 ORTHO05D008342 2.2e-86 323.9 543 38.7
SGA_v2.0_scaffold229G43344 Striga asiatica HOM05D006568 ORTHO05D008342 7.4e-79 298.9 445 42.2
VMungo1309G2996 Vigna mungo HOM05D006568 ORTHO05D008342 7.4e-79 298.9 522 40.8
SEGI_41462 Sequoiadendron giganteum HOM05D006568 ORTHO05D008342 2.8e-78 297.0 548 40.3
SEGI_32321 Sequoiadendron giganteum HOM05D006568 ORTHO05D008342 1.1e-74 285.0 567 37.9
Os09g0556800 Oryza sativa ssp. japonica HOM05D006568 ORTHO05D008342 1.2e-71 275.0 513 38.4
MBI15_g45924_MAGBIO Magnolia biondii HOM05D006568 ORTHO05D008342 2.0e-71 274.2 298 54.4
Actinidia38697 Actinidia chinensis HOM05D006568 ORTHO05D008342 2.2e-70 270.8 241 60.6
Zm00001eb320530 Zea mays HOM05D006568 ORTHO05D008342 8.2e-70 268.9 523 36.9
Actinidia38696 Actinidia chinensis HOM05D006568 ORTHO05D008342 1.3e-67 261.5 216 66.7
AagrBONN_evm.TU.Sc2ySwM_228.5766 Anthoceros agrestis HOM05D006568 ORTHO05D008342 5.7e-55 219.5 549 32.1
PSO782G3486 Papaver somniferum HOM05D006568 ORTHO05D008342 8.3e-54 215.7 358 44.1
Mapoly0083s0072 Marchantia polymorpha HOM05D006568 ORTHO05D008342 3.2e-45 187.2 609 29.4
Zm00001eb104550 Zea mays HOM05D006568 ORTHO05D008342 1.7e-38 164.9 374 35.3
SMO172G0216 Selaginella moellendorffii HOM05D006568 ORTHO05D008342 4.1e-37 160.2 559 28.1
unitig_27.g25107 Utricularia gibba HOM05D006568 ORTHO05D008342 4.1e-37 160.2 141 64.5
TAR636G1038 Trochodendron aralioides HOM05D006568 ORTHO05D008342 1.5e-26 125.2 81 72.8
Peaxi162Scf00370g00114 Petunia axillaris HOM05D006568 ORTHO05D008342 2.4e-16 91.3 157 42.7
Dinv22138 Davidia involucrata HOM05D006568 ORTHO05D008342 2.2e-14 84.7 76 60.5
Oeu060513.1 Olea europaea HOM05D006568 ORTHO05D008342 4.9e-06 57.0 51 51.0


User provided reference genes

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