Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_008766 Daucus carota HOM05D005945 ORTHO05D006749 0.0e+00 1525.4 796 100.0
Actinidia15315 Actinidia chinensis HOM05D005945 ORTHO05D006749 5.2e-95 353.2 813 35.3
Dinv39407 Davidia involucrata HOM05D005945 ORTHO05D006749 3.1e-92 344.0 843 33.8
CSS0038834 Camellia sinensis var. sinensis HOM05D005945 ORTHO05D006749 4.7e-88 330.1 818 34.4
CSS0001698 Camellia sinensis var. sinensis HOM05D005945 ORTHO05D006749 8.9e-87 325.9 818 34.2
Nitab4.5_0000110g0520 Nicotiana tabacum HOM05D005945 ORTHO05D006749 4.3e-81 307.0 812 33.4
Nitab4.5_0003783g0040 Nicotiana tabacum HOM05D005945 ORTHO05D006749 4.4e-78 297.0 812 32.9
Oeu056183.1 Olea europaea HOM05D005945 ORTHO05D006749 1.1e-73 282.3 873 31.2
Cc10_g03040 Coffea canephora HOM05D005945 ORTHO05D006749 7.3e-73 279.6 819 31.3
Peaxi162Scf00690g00118 Petunia axillaris HOM05D005945 ORTHO05D006749 2.1e-72 278.1 813 31.7
ECA247G0868 Erigeron canadensis HOM05D005945 ORTHO05D006749 2.3e-71 274.6 918 29.3
HanXRQChr04g0105591 Helianthus annuus HOM05D005945 ORTHO05D006749 2.3e-71 274.6 794 31.5
PGSC0003DMG400005162 Solanum tuberosum HOM05D005945 ORTHO05D006749 4.9e-69 266.9 809 29.7
Thecc.08G024700 Theobroma cacao HOM05D005945 ORTHO05D006749 2.3e-63 248.1 902 28.0
MSTRG.25161 Avicennia marina HOM05D005945 ORTHO05D006749 1.2e-62 245.7 822 31.4
Migut.C00710 Erythranthe guttata HOM05D005945 ORTHO05D006749 2.0e-62 245.0 814 30.7
Oeu036192.1 Olea europaea HOM05D005945 ORTHO05D006749 2.6e-62 244.6 838 30.0
Sopen04g033790 Solanum pennellii HOM05D005945 ORTHO05D006749 9.9e-62 242.7 720 30.4
Solyc04g080200.4 Solanum lycopersicum HOM05D005945 ORTHO05D006749 1.7e-61 241.9 720 31.4
Lsat_1_v5_gn_1_17620 Lactuca sativa HOM05D005945 ORTHO05D006749 4.9e-61 240.4 801 31.6
TAR376G0838 Trochodendron aralioides HOM05D005945 ORTHO05D006749 5.4e-60 236.9 817 30.2
COL.COLO4_26338 Corchorus olitorius HOM05D005945 ORTHO05D006749 6.0e-59 233.4 907 28.7
Duzib093G2051 Durio zibethinus HOM05D005945 ORTHO05D006749 5.6e-57 226.9 896 29.5
HanXRQChr04g0105581 Helianthus annuus HOM05D005945 ORTHO05D006749 1.2e-56 225.7 301 47.2
Gorai.010G010800 Gossypium raimondii HOM05D005945 ORTHO05D006749 2.1e-56 224.9 879 28.7
Gohir.D06G008100 Gossypium hirsutum HOM05D005945 ORTHO05D006749 6.2e-56 223.4 884 28.6
Prupe.1G381200 Prunus persica HOM05D005945 ORTHO05D006749 3.4e-54 217.6 831 30.2
Rhsim06G0034700 Rhododendron simsii HOM05D005945 ORTHO05D006749 5.8e-54 216.9 845 27.2
Gohir.A06G010700 Gossypium hirsutum HOM05D005945 ORTHO05D006749 1.9e-52 211.8 880 27.7
QL02p007988 Quercus lobata HOM05D005945 ORTHO05D006749 3.5e-51 207.6 923 27.6
FAN15G0837 Fragaria x ananassa HOM05D005945 ORTHO05D006749 1.3e-50 205.7 827 29.4
Cfa018140 Carpinus fangiana HOM05D005945 ORTHO05D006749 3.0e-50 204.5 836 27.0
Haze_17984 Corylus avellana HOM05D005945 ORTHO05D006749 3.9e-50 204.1 832 27.5
Lj4A42T73 Lonicera japonica HOM05D005945 ORTHO05D006749 6.6e-50 203.4 223 53.8
DCAR_001168 Daucus carota HOM05D005945 ORTHO05D006749 1.5e-49 202.2 132 81.8
FvH4_2g39990 Fragaria vesca HOM05D005945 ORTHO05D006749 3.3e-49 201.1 826 27.7
FAN20G0334 Fragaria x ananassa HOM05D005945 ORTHO05D006749 3.6e-48 197.6 818 28.2
FAN27G1966 Fragaria x ananassa HOM05D005945 ORTHO05D006749 6.2e-48 196.8 830 29.4
CANSAT25G3494 Cannabis sativa HOM05D005945 ORTHO05D006749 8.1e-48 196.4 887 27.2
RcHm_v2.0_Chr6g0300761 Rosa chinensis HOM05D005945 ORTHO05D006749 1.2e-46 192.6 823 27.5
SGA_v2.0_scaffold326G48709 Striga asiatica HOM05D005945 ORTHO05D006749 4.4e-46 190.7 273 43.6
Hund26580 Selenicereus undatus HOM05D005945 ORTHO05D006749 5.8e-46 190.3 863 27.6
Sc15g0006890 Simmondsia chinensis HOM05D005945 ORTHO05D006749 5.8e-46 190.3 831 27.8
Dinv36067 Davidia involucrata HOM05D005945 ORTHO05D006749 7.6e-46 189.9 223 52.0
GSVIVG01009690001 Vitis vinifera HOM05D005945 ORTHO05D006749 1.3e-45 189.1 259 46.7
Eucgr.F01555 Eucalyptus grandis HOM05D005945 ORTHO05D006749 1.4e-44 185.7 825 29.5
Manes.18G028200 Manihot esculenta HOM05D005945 ORTHO05D006749 2.4e-44 184.9 846 25.9
Nn5g29549 Nelumbo nucifera HOM05D005945 ORTHO05D006749 4.2e-44 184.1 904 27.4
THA.LOC104803244 Tarenaya hassleriana HOM05D005945 ORTHO05D006749 3.0e-42 177.9 825 27.4
Potri.014G181200 Populus trichocarpa HOM05D005945 ORTHO05D006749 1.5e-41 175.6 304 39.1
Cpa.g.sc64.76 Carica papaya HOM05D005945 ORTHO05D006749 3.3e-41 174.5 988 25.1
MD15G1030400 Malus domestica HOM05D005945 ORTHO05D006749 9.6e-41 172.9 765 27.2
MELO3C010931.2 Cucumis melo HOM05D005945 ORTHO05D006749 1.6e-40 172.2 853 27.4
TAR628G0886 Trochodendron aralioides HOM05D005945 ORTHO05D006749 2.8e-40 171.4 257 42.8
Manes.05G161400 Manihot esculenta HOM05D005945 ORTHO05D006749 6.2e-40 170.2 856 26.2
arahy.Tifrunner.gnm1.ann1.Q0ZVI3 Arachis hypogaea HOM05D005945 ORTHO05D006749 2.0e-38 165.2 817 27.4
PGR031G1506 Punica granatum HOM05D005945 ORTHO05D006749 7.6e-38 163.3 821 26.7
TAR628G0416 Trochodendron aralioides HOM05D005945 ORTHO05D006749 1.7e-37 162.2 178 52.8
MD08G1033800 Malus domestica HOM05D005945 ORTHO05D006749 3.8e-37 161.0 260 42.7
CsaV3_2G028570 Cucumis sativus L. HOM05D005945 ORTHO05D006749 4.9e-37 160.6 850 26.4
ClCG08G015230 Citrullus lanatus HOM05D005945 ORTHO05D006749 6.4e-37 160.2 825 26.7
TWI12G1232 Tripterygium wilfordii HOM05D005945 ORTHO05D006749 6.4e-37 160.2 262 39.3
Ca_03064_v3 Cicer arietinum L. HOM05D005945 ORTHO05D006749 1.9e-36 158.7 830 25.5
Lj3g0003314 Lotus japonicus HOM05D005945 ORTHO05D006749 4.2e-36 157.5 828 26.1
Atru.chr13.502 Acer truncatum HOM05D005945 ORTHO05D006749 3.5e-35 154.5 234 44.4
Actinidia22556 Actinidia chinensis HOM05D005945 ORTHO05D006749 3.5e-35 154.5 765 25.6
Psat7g242000 Pisum sativum HOM05D005945 ORTHO05D006749 4.6e-35 154.1 922 27.1
Carub.0005s2360 Capsella rubella HOM05D005945 ORTHO05D006749 1.3e-34 152.5 805 24.1
Phvul.010G012000 Phaseolus vulgaris HOM05D005945 ORTHO05D006749 2.3e-34 151.8 836 25.4
Sabra14G0141200 Salix brachista HOM05D005945 ORTHO05D006749 3.9e-34 151.0 408 35.3
Sed0009733 Sechium edule HOM05D005945 ORTHO05D006749 8.7e-34 149.8 869 25.8
PSO541G4169 Papaver somniferum HOM05D005945 ORTHO05D006749 1.5e-33 149.1 340 32.9
TPR.G32532 Trifolium pratense HOM05D005945 ORTHO05D006749 1.9e-33 148.7 298 36.6
VMungo0331G0095 Vigna mungo HOM05D005945 ORTHO05D006749 1.9e-33 148.7 825 24.5
PSO675G9049 Papaver somniferum HOM05D005945 ORTHO05D006749 2.5e-33 148.3 295 34.6
BolC8t50829H Brassica oleracea HOM05D005945 ORTHO05D006749 3.3e-33 147.9 868 25.2
BcaC07g39998 Brassica carinata HOM05D005945 ORTHO05D006749 9.6e-33 146.4 874 24.1
C08p32110 Brassica napus HOM05D005945 ORTHO05D006749 9.6e-33 146.4 874 24.1
Glyma.03G071500 Glycine max HOM05D005945 ORTHO05D006749 9.6e-33 146.4 864 24.5
arahy.Tifrunner.gnm1.ann1.01TKSZ Arachis hypogaea HOM05D005945 ORTHO05D006749 2.1e-32 145.2 846 25.9
A09p49740 Brassica napus HOM05D005945 ORTHO05D006749 2.1e-32 145.2 850 24.7
BraA09t40427Z Brassica rapa HOM05D005945 ORTHO05D006749 2.1e-32 145.2 850 24.7
Sp5g05720 Schrenkiella parvula HOM05D005945 ORTHO05D006749 2.8e-32 144.8 857 24.6
MBI16_g17464_MAGBIO Magnolia biondii HOM05D005945 ORTHO05D006749 8.1e-32 143.3 265 39.2
BcaC07g40112 Brassica carinata HOM05D005945 ORTHO05D006749 1.1e-31 142.9 859 25.0
CiPaw.15G076000 Carya illinoinensis HOM05D005945 ORTHO05D006749 1.1e-31 142.9 347 33.1
EL10Ac1g01817 Beta vulgaris HOM05D005945 ORTHO05D006749 3.1e-31 141.4 896 23.0
Aa31LG10G11720 Aethionema arabicum HOM05D005945 ORTHO05D006749 2.0e-30 138.7 263 37.3
Thhalv10005811m.g Eutrema salsugineum HOM05D005945 ORTHO05D006749 4.5e-30 137.5 795 24.5
Aqoxy4G01586 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 5.8e-30 137.1 453 30.5
Medtr4g019490 Medicago truncatula HOM05D005945 ORTHO05D006749 1.3e-29 136.0 534 27.0
AT3G56870 Arabidopsis thaliana HOM05D005945 ORTHO05D006749 1.7e-29 135.6 257 36.2
Ah.11g043130 Amaranthus hybridus HOM05D005945 ORTHO05D006749 3.8e-29 134.4 937 23.3
Glyma.01G104600 Glycine max HOM05D005945 ORTHO05D006749 3.8e-29 134.4 311 33.8
Lj2g0002553 Lotus japonicus HOM05D005945 ORTHO05D006749 3.8e-29 134.4 814 26.0
AL5G38260 Arabidopsis lyrata HOM05D005945 ORTHO05D006749 1.4e-28 132.5 806 24.8
Lalb_Chr03g0042671 Lupinus albus HOM05D005945 ORTHO05D006749 1.4e-28 132.5 798 24.3
Zm00001eb404680 Zea mays HOM05D005945 ORTHO05D006749 7.1e-28 130.2 281 34.9
vmacro21631 Vaccinium macrocarpon HOM05D005945 ORTHO05D006749 4.6e-27 127.5 180 46.1
Sed0010063 Sechium edule HOM05D005945 ORTHO05D006749 6.0e-27 127.1 834 24.5
Aqoxy6G01057 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 1.8e-26 125.6 257 36.2
Zm00001eb021170 Zea mays HOM05D005945 ORTHO05D006749 1.8e-26 125.6 301 33.2
Gohir.D02G094500 Gossypium hirsutum HOM05D005945 ORTHO05D006749 5.1e-26 124.0 271 35.8
CARHR167020 Cardamine hirsuta HOM05D005945 ORTHO05D006749 1.1e-25 122.9 275 35.3
SEGI_34412 Sequoiadendron giganteum HOM05D057448 ORTHO05D006749 7.4e-25 120.2 182 42.3
Gorai.005G107400 Gossypium raimondii HOM05D005945 ORTHO05D006749 9.6e-25 119.8 273 35.9
Os03g0594700 Oryza sativa ssp. japonica HOM05D005945 ORTHO05D006749 1.6e-24 119.0 262 33.6
HPP92_021270 Vanilla planifolia HOM05D005945 ORTHO05D006749 4.8e-24 117.5 282 34.0
AUR62038825 Chenopodium quinoa HOM05D005945 ORTHO05D006749 2.4e-23 115.2 240 35.4
ATR0618G067 Amborella trichopoda HOM05D005945 ORTHO05D006749 9.0e-23 113.2 127 50.4
Aqoxy4G01559 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 5.8e-22 110.5 416 27.4
AUR62043686 Chenopodium quinoa HOM05D005945 ORTHO05D006749 7.6e-22 110.2 289 33.6
Lalb_Chr19g0125071 Lupinus albus HOM05D005945 ORTHO05D006749 1.3e-18 99.4 223 33.2
Atru.chr13.504 Acer truncatum HOM05D005945 ORTHO05D006749 2.2e-16 92.0 191 36.1
Ah.05g167400 Amaranthus hybridus HOM05D005945 ORTHO05D006749 3.7e-16 91.3 222 32.4
vmacro21630 Vaccinium macrocarpon HOM05D005945 ORTHO05D006749 4.8e-16 90.9 547 23.9
Sc18g0006320 Simmondsia chinensis HOM05D005945 ORTHO05D006749 1.0e-10 73.2 193 32.1
TAR381G0602 Trochodendron aralioides HOM05D005945 ORTHO05D006749 2.3e-10 72.0 121 42.1
CDE04G3738 Ceratophyllum demersum HOM05D060868 ORTHO05D006749 8.8e-10 70.1 119 40.3
AagrBONN_evm.TU.Sc2ySwM_344.3266 Anthoceros agrestis HOM05D005945 ORTHO05D006749 1.5e-09 69.3 141 34.8
HPP92_021280 Vanilla planifolia HOM05D050438 ORTHO05D006749 1.2e-06 59.7 282 25.5
Mapoly0005s0138 Marchantia polymorpha HOM05D036654 ORTHO05D006749 3.4e-06 58.2 220 26.4


User provided reference genes

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