Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_008734 Daucus carota HOM05D005003 ORTHO05D006220 2.0e-80 302.4 154 100.0
Rhsim06G0082100 Rhododendron simsii HOM05D005003 ORTHO05D006220 3.5e-40 168.7 151 62.3
Lj4A723T22 Lonicera japonica HOM05D005003 ORTHO05D006220 2.3e-39 166.0 146 61.6
HanXRQChr11g0327771 Helianthus annuus HOM05D005003 ORTHO05D006220 5.1e-39 164.9 148 61.5
Dinv44775 Davidia involucrata HOM05D005003 ORTHO05D006220 2.5e-38 162.5 146 59.6
Peaxi162Scf00041g01737 Petunia axillaris HOM05D005003 ORTHO05D006220 3.3e-38 162.2 151 57.0
Cc10_g07210 Coffea canephora HOM05D005003 ORTHO05D006220 4.3e-38 161.8 145 58.6
ECA246G4896 Erigeron canadensis HOM05D005003 ORTHO05D006220 4.3e-38 161.8 162 56.2
CSS0024644 Camellia sinensis var. sinensis HOM05D005003 ORTHO05D006220 5.6e-38 161.4 154 58.4
vmacro21269 Vaccinium macrocarpon HOM05D005003 ORTHO05D006220 7.3e-38 161.0 153 57.5
Hma1.2p1_0575F.1_g181570 Hydrangea macrophylla HOM05D005003 ORTHO05D006220 1.6e-37 159.8 144 61.8
Solyc04g074140.4 Solanum lycopersicum HOM05D005003 ORTHO05D006220 2.8e-37 159.1 144 58.3
Sopen04g029320 Solanum pennellii HOM05D005003 ORTHO05D006220 2.8e-37 159.1 144 58.3
PGSC0003DMG400006406 Solanum tuberosum HOM05D005003 ORTHO05D006220 1.4e-36 156.8 144 58.3
CAN.G101.26 Capsicum annuum HOM05D005003 ORTHO05D006220 4.0e-36 155.2 155 54.2
Nitab4.5_0005777g0050 Nicotiana tabacum HOM05D005003 ORTHO05D006220 2.6e-35 152.5 123 62.6
Oeu046301.1 Olea europaea HOM05D005003 ORTHO05D006220 6.4e-34 147.9 125 64.0
Cfa013635 Carpinus fangiana HOM05D005003 ORTHO05D006220 1.1e-33 147.1 148 55.4
Migut.C00095 Erythranthe guttata HOM05D005003 ORTHO05D006220 9.2e-33 144.1 146 55.5
Haze_22267 Corylus avellana HOM05D005003 ORTHO05D006220 2.1e-32 142.9 150 55.3
Lsat_1_v5_gn_6_103020 Lactuca sativa HOM05D005003 ORTHO05D006220 6.0e-32 141.4 131 62.6
MSTRG.24973 Avicennia marina HOM05D005003 ORTHO05D006220 1.0e-31 140.6 126 57.9
QL12p036782 Quercus lobata HOM05D005003 ORTHO05D006220 1.0e-31 140.6 141 53.9
MBI02_g35765_MAGBIO Magnolia biondii HOM05D005003 ORTHO05D006220 3.9e-31 138.7 158 53.2
CiPaw.07G180100 Carya illinoinensis HOM05D005003 ORTHO05D006220 1.1e-30 137.1 132 55.3
Gorai.005G094100 Gossypium raimondii HOM05D005003 ORTHO05D006220 3.3e-30 135.6 147 49.7
Dinv14326 Davidia involucrata HOM05D005003 ORTHO05D006220 7.3e-30 134.4 145 54.5
Gohir.D02G083500 Gossypium hirsutum HOM05D005003 ORTHO05D006220 1.2e-29 133.7 161 47.8
Nn1g05355 Nelumbo nucifera HOM05D005003 ORTHO05D006220 1.2e-29 133.7 148 52.7
RcHm_v2.0_Chr7g0238981 Rosa chinensis HOM05D005003 ORTHO05D006220 2.1e-29 132.9 139 53.2
THA.LOC104816746 Tarenaya hassleriana HOM05D005003 ORTHO05D006220 4.7e-29 131.7 128 54.7
EL10Ac1g01213 Beta vulgaris HOM05D005003 ORTHO05D006220 6.2e-29 131.3 151 49.7
Eucgr.B00022 Eucalyptus grandis HOM05D005003 ORTHO05D006220 1.1e-28 130.6 153 47.7
Thhalv10001817m.g Eutrema salsugineum HOM05D005003 ORTHO05D006220 1.1e-28 130.6 147 53.7
Ciclev10003185m.g Citrus clementina HOM05D005003 ORTHO05D006220 1.8e-28 129.8 125 54.4
PGR044G0640 Punica granatum HOM05D005003 ORTHO05D006220 1.8e-28 129.8 123 53.7
Prupe.1G517000 Prunus persica HOM05D005003 ORTHO05D006220 2.4e-28 129.4 151 49.0
FAN04G0108 Fragaria x ananassa HOM05D005003 ORTHO05D006220 3.1e-28 129.0 146 50.7
Atru.chr13.1187 Acer truncatum HOM05D005003 ORTHO05D006220 5.2e-28 128.3 127 55.1
Nn5g30108 Nelumbo nucifera HOM05D005003 ORTHO05D006220 8.9e-28 127.5 142 51.4
CANSAT25G3351 Cannabis sativa HOM05D005003 ORTHO05D006220 1.5e-27 126.7 99 60.6
Duzib116G0723 Durio zibethinus HOM05D005003 ORTHO05D006220 1.5e-27 126.7 127 52.8
FAN13G0908 Fragaria x ananassa HOM05D005003 ORTHO05D006220 1.5e-27 126.7 146 49.3
Oeu012928.1 Olea europaea HOM05D005003 ORTHO05D006220 1.5e-27 126.7 178 45.5
A09p32030 Brassica napus HOM05D005003 ORTHO05D006220 2.6e-27 125.9 143 48.3
TAR625G1506 Trochodendron aralioides HOM05D005003 ORTHO05D006220 2.6e-27 125.9 131 54.2
Ah.05g169960 Amaranthus hybridus HOM05D005003 ORTHO05D006220 3.4e-27 125.6 148 48.6
BraA09t38740Z Brassica rapa HOM05D005003 ORTHO05D006220 3.4e-27 125.6 143 48.3
FvH4_5g37331 Fragaria vesca HOM05D005003 ORTHO05D006220 3.4e-27 125.6 146 50.0
FAN18G2350 Fragaria x ananassa HOM05D005003 ORTHO05D006220 3.4e-27 125.6 146 50.0
Hund26962 Selenicereus undatus HOM05D005003 ORTHO05D006220 4.4e-27 125.2 144 49.3
Thecc.08G106800 Theobroma cacao HOM05D005003 ORTHO05D006220 4.4e-27 125.2 122 55.7
C06p11460 Brassica napus HOM05D005003 ORTHO05D006220 5.8e-27 124.8 148 48.0
Sp1g29750 Schrenkiella parvula HOM05D005003 ORTHO05D006220 5.8e-27 124.8 151 52.3
FAN08G0347 Fragaria x ananassa HOM05D005003 ORTHO05D006220 7.6e-27 124.4 146 50.0
BcaB07g33109 Brassica carinata HOM05D005003 ORTHO05D006220 9.9e-27 124.0 134 54.5
PSO447G0231 Papaver somniferum HOM05D005003 ORTHO05D006220 1.7e-26 123.2 124 51.6
SGA_v2.0_scaffold729G53525 Striga asiatica HOM05D005003 ORTHO05D006220 1.7e-26 123.2 112 58.0
COL.COLO4_16399 Corchorus olitorius HOM05D005003 ORTHO05D006220 2.2e-26 122.9 144 52.8
BcaC05g27758 Brassica carinata HOM05D005003 ORTHO05D006220 2.9e-26 122.5 145 51.0
C05p37520 Brassica napus HOM05D005003 ORTHO05D006220 2.9e-26 122.5 145 51.0
BcaC08g43771 Brassica carinata HOM05D005003 ORTHO05D006220 4.9e-26 121.7 128 50.0
RcHm_v2.0_Chr4g0408951 Rosa chinensis HOM05D005003 ORTHO05D006220 4.9e-26 121.7 132 50.0
arahy.Tifrunner.gnm1.ann1.T3BG7X Arachis hypogaea HOM05D005003 ORTHO05D006220 6.4e-26 121.3 129 51.9
arahy.Tifrunner.gnm1.ann1.DW6FDI Arachis hypogaea HOM05D005003 ORTHO05D006220 8.4e-26 120.9 129 51.9
Aqoxy6G00783 Aquilegia oxysepala HOM05D005003 ORTHO05D006220 1.1e-25 120.6 155 47.7
Lalb_Chr11g0073941 Lupinus albus HOM05D005003 ORTHO05D006220 1.9e-25 119.8 157 48.4
MBI05_g19344_MAGBIO Magnolia biondii HOM05D005003 ORTHO05D006220 1.9e-25 119.8 147 49.0
AUR62038523 Chenopodium quinoa HOM05D005003 ORTHO05D006220 3.2e-25 119.0 131 49.6
MD08G1182800 Malus domestica HOM05D005003 ORTHO05D006220 3.2e-25 119.0 135 48.1
Manes.02G152700 Manihot esculenta HOM05D005003 ORTHO05D006220 3.2e-25 119.0 157 46.5
Gohir.D05G229066 Gossypium hirsutum HOM05D005003 ORTHO05D006220 5.4e-25 118.2 148 48.6
Gorai.009G237000 Gossypium raimondii HOM05D005003 ORTHO05D006220 5.4e-25 118.2 148 48.6
PSO210G4886 Papaver somniferum HOM05D005003 ORTHO05D006220 5.4e-25 118.2 124 52.4
GSVIVG01009030001 Vitis vinifera HOM05D005003 ORTHO05D006220 5.4e-25 118.2 154 48.1
Lalb_Chr08g0232881 Lupinus albus HOM05D005003 ORTHO05D006220 9.3e-25 117.5 148 48.6
A05p23910 Brassica napus HOM05D005003 ORTHO05D006220 1.2e-24 117.1 145 49.7
Sc01g0000450 Simmondsia chinensis HOM05D005003 ORTHO05D006220 1.2e-24 117.1 141 50.4
Sed0012063 Sechium edule HOM05D005003 ORTHO05D006220 2.7e-24 115.9 140 46.4
BcaB03g13676 Brassica carinata HOM05D005003 ORTHO05D006220 3.5e-24 115.5 146 48.6
Gohir.A05G226300 Gossypium hirsutum HOM05D005003 ORTHO05D006220 3.5e-24 115.5 148 48.6
Cpa.g.sc36.131 Carica papaya HOM05D005003 ORTHO05D006220 7.8e-24 114.4 145 46.2
BolC6t36281H Brassica oleracea HOM05D005003 ORTHO05D006220 1.0e-23 114.0 138 47.8
AUR62027758 Chenopodium quinoa HOM05D005003 ORTHO05D006220 1.3e-23 113.6 146 47.3
Potri.002G096500 Populus trichocarpa HOM05D005003 ORTHO05D006220 1.3e-23 113.6 142 47.2
Carub.0001s3263 Capsella rubella HOM05D005003 ORTHO05D006220 1.7e-23 113.2 120 52.5
Manes.18G067500 Manihot esculenta HOM05D005003 ORTHO05D006220 2.3e-23 112.8 156 44.9
TPR.G20790 Trifolium pratense HOM05D005003 ORTHO05D006220 2.3e-23 112.8 143 46.9
Ca_02288_v3 Cicer arietinum L. HOM05D005003 ORTHO05D006220 3.0e-23 112.5 90 63.3
TWI56G0498 Tripterygium wilfordii HOM05D005003 ORTHO05D006220 3.0e-23 112.5 90 62.2
ClCG08G011090 Citrullus lanatus HOM05D005003 ORTHO05D006220 8.7e-23 110.9 151 42.4
Sabra02G0076000 Salix brachista HOM05D005003 ORTHO05D006220 8.7e-23 110.9 142 45.8
AL1G49100 Arabidopsis lyrata HOM05D005003 ORTHO05D006220 5.6e-22 108.2 134 48.5
CsaV3_2G029670 Cucumis sativus L. HOM05D005003 ORTHO05D006220 7.3e-22 107.8 151 41.7
AT1G34630 Arabidopsis thaliana HOM05D005003 ORTHO05D006220 9.6e-22 107.5 141 47.5
RcHm_v2.0_Chr3g0470741 Rosa chinensis HOM05D005003 ORTHO05D006220 9.6e-22 107.5 139 43.9
CARHR033930 Cardamine hirsuta HOM05D005003 ORTHO05D006220 1.3e-21 107.1 130 52.3
Gohir.D06G036300 Gossypium hirsutum HOM05D005003 ORTHO05D006220 1.6e-21 106.7 141 48.2
Psat1g137840 Pisum sativum HOM05D005003 ORTHO05D006220 1.6e-21 106.7 143 46.2
MELO3C011025.2 Cucumis melo HOM05D005003 ORTHO05D006220 2.1e-21 106.3 147 41.5
Gorai.010G040300 Gossypium raimondii HOM05D005003 ORTHO05D006220 2.8e-21 105.9 141 47.5
Os03g0190900 Oryza sativa ssp. japonica HOM05D005003 ORTHO05D006220 3.6e-21 105.5 86 61.6
Lj6g0010535 Lotus japonicus HOM05D005003 ORTHO05D006220 6.2e-21 104.8 90 57.8
Zm00001eb006880 Zea mays HOM05D005003 ORTHO05D006220 6.2e-21 104.8 86 62.8
SalBow7G4179 Salvia bowleyana HOM05D005003 ORTHO05D006220 1.4e-20 103.6 116 50.0
Gohir.A06G035800 Gossypium hirsutum HOM05D005003 ORTHO05D006220 4.0e-20 102.1 153 45.8
BolC5t32493H Brassica oleracea HOM05D005003 ORTHO05D006220 5.3e-20 101.7 128 50.0
HPP92_027712 Vanilla planifolia HOM05D005003 ORTHO05D006220 3.4e-19 99.0 132 46.2
Glyma.15G183500 Glycine max HOM05D005003 ORTHO05D006220 4.4e-19 98.6 109 49.5
unitig_37.g12957 Utricularia gibba HOM05D005003 ORTHO05D006220 7.6e-19 97.8 130 46.2
BraA05t21269Z Brassica rapa HOM05D005003 ORTHO05D006220 1.7e-18 96.7 128 48.4
Mapoly0082s0089 Marchantia polymorpha HOM05D005003 ORTHO05D006220 2.2e-18 96.3 86 57.0
Hund16905 Selenicereus undatus HOM05D005003 ORTHO05D006220 2.2e-18 96.3 119 47.1
unitig_37.g12958 Utricularia gibba HOM05D005003 ORTHO05D006220 8.4e-18 94.4 124 45.2
Pp3c21_12240 Physcomitrium patens HOM05D005003 ORTHO05D006220 2.4e-17 92.8 87 54.0
CDE03G0282 Ceratophyllum demersum HOM05D005003 ORTHO05D006220 4.2e-17 92.0 99 53.5
Phvul.009G222900 Phaseolus vulgaris HOM05D005003 ORTHO05D006220 5.4e-17 91.7 149 39.6
Aa31LG6G8500 Aethionema arabicum HOM05D005003 ORTHO05D006220 1.2e-16 90.5 154 40.9
Actinidia10323 Actinidia chinensis HOM05D005003 ORTHO05D006220 9.6e-14 80.9 53 69.8
SEGI_39253 Sequoiadendron giganteum HOM05D005003 ORTHO05D006220 9.6e-14 80.9 135 38.5
SMO367G0178 Selaginella moellendorffii HOM05D005003 ORTHO05D006220 3.6e-13 79.0 86 50.0
AagrBONN_evm.TU.Sc2ySwM_368.3429 Anthoceros agrestis HOM05D005003 ORTHO05D006220 1.4e-12 77.0 83 48.2
Nitab4.5_0000232g0240 Nicotiana tabacum HOM05D005003 ORTHO05D006220 5.8e-11 71.6 44 70.5
ATR0782G104 Amborella trichopoda HOM05D005003 ORTHO05D006220 3.8e-10 68.9 100 40.0
VMungo1309G2656 Vigna mungo HOM05D005003 ORTHO05D006220 3.8e-10 68.9 154 35.7
ECA232G1818 Erigeron canadensis HOM05D005003 ORTHO05D006220 1.8e-07 60.1 42 61.9
Gohir.A02G076300 Gossypium hirsutum HOM05D005003 ORTHO05D006220 3.9e-07 58.9 33 75.8
MBI19_g01918_MAGBIO Magnolia biondii HOM05D007350 ORTHO05D009323 8.7e-07 57.8 44 63.6
MD15G1368900 Malus domestica HOM05D005003 ORTHO05D006220 1.9e-06 56.6 111 39.6


User provided reference genes

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