Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_008697 Daucus carota HOM05D004171 ORTHO05D004983 1.7e-151 539.3 265 100.0
Cc05_g12750 Coffea canephora HOM05D004171 ORTHO05D004983 3.1e-89 332.4 265 61.9
Nitab4.5_0000297g0160 Nicotiana tabacum HOM05D004171 ORTHO05D004983 7.8e-88 327.8 258 62.4
Nitab4.5_0009110g0010 Nicotiana tabacum HOM05D004171 ORTHO05D004983 2.3e-87 326.2 267 61.0
Dinv08350 Davidia involucrata HOM05D004171 ORTHO05D004983 1.1e-86 323.9 236 66.5
Duzib268G0239 Durio zibethinus HOM05D004171 ORTHO05D004983 4.3e-86 322.0 245 62.4
Dinv22359 Davidia involucrata HOM05D004171 ORTHO05D004983 7.3e-86 321.2 258 62.4
Peaxi162Scf01216g00047 Petunia axillaris HOM05D004171 ORTHO05D004983 7.3e-86 321.2 264 60.6
SalBow7G4117 Salvia bowleyana HOM05D004171 ORTHO05D004983 9.5e-86 320.9 256 61.7
COL.COLO4_09488 Corchorus olitorius HOM05D004171 ORTHO05D004983 1.2e-85 320.5 237 63.3
TAR629G3225 Trochodendron aralioides HOM05D004171 ORTHO05D004983 2.8e-85 319.3 253 60.5
Thecc.07G070400 Theobroma cacao HOM05D004171 ORTHO05D004983 4.7e-85 318.5 271 58.3
Duzib213G0518 Durio zibethinus HOM05D004171 ORTHO05D004983 6.1e-85 318.2 234 64.1
TAR627G1073 Trochodendron aralioides HOM05D004171 ORTHO05D004983 8.0e-85 317.8 250 60.8
MSTRG.12927 Avicennia marina HOM05D004171 ORTHO05D004983 1.0e-84 317.4 256 60.5
PGSC0003DMG400019283 Solanum tuberosum HOM05D004171 ORTHO05D004983 1.8e-84 316.6 257 59.9
Duzib170G1088 Durio zibethinus HOM05D004171 ORTHO05D004983 5.2e-84 315.1 234 64.1
ClCG11G018550 Citrullus lanatus HOM05D004171 ORTHO05D004983 1.2e-83 313.9 233 64.8
Solyc07g063620.3 Solanum lycopersicum HOM05D004171 ORTHO05D004983 1.5e-83 313.5 257 59.5
Glyma.12G134300 Glycine max HOM05D004171 ORTHO05D004983 2.0e-83 313.2 233 63.9
Hma1.2p1_1176F.1_g264170 Hydrangea macrophylla HOM05D004171 ORTHO05D004983 2.6e-83 312.8 231 65.8
Sopen07g031800 Solanum pennellii HOM05D004171 ORTHO05D004983 2.6e-83 312.8 233 63.1
TWI38G2120 Tripterygium wilfordii HOM05D004171 ORTHO05D004983 2.6e-83 312.8 233 63.5
Gohir.D05G362300 Gossypium hirsutum HOM05D004171 ORTHO05D004983 3.4e-83 312.4 247 61.5
Gorai.009G430400 Gossypium raimondii HOM05D004171 ORTHO05D004983 4.4e-83 312.0 250 61.2
Manes.15G082500 Manihot esculenta HOM05D004171 ORTHO05D004983 4.4e-83 312.0 236 63.1
Gohir.A04G025600 Gossypium hirsutum HOM05D004171 ORTHO05D004983 5.8e-83 311.6 234 63.7
Cpa.g.sc12.36 Carica papaya HOM05D004171 ORTHO05D004983 7.5e-83 311.2 258 56.6
CSS0009250 Camellia sinensis var. sinensis HOM05D004171 ORTHO05D004983 9.8e-83 310.8 257 59.5
MELO3C018184.2 Cucumis melo HOM05D004171 ORTHO05D004983 9.8e-83 310.8 231 64.1
Potri.011G126300 Populus trichocarpa HOM05D004171 ORTHO05D004983 9.8e-83 310.8 254 59.4
TPR.G25226 Trifolium pratense HOM05D004171 ORTHO05D004983 1.3e-82 310.5 247 60.3
Actinidia09971 Actinidia chinensis HOM05D004171 ORTHO05D004983 2.2e-82 309.7 257 59.5
Phvul.011G138400 Phaseolus vulgaris HOM05D004171 ORTHO05D004983 2.2e-82 309.7 234 61.5
Actinidia05147 Actinidia chinensis HOM05D004171 ORTHO05D004983 2.9e-82 309.3 258 58.1
Atru.chr2.2929 Acer truncatum HOM05D004171 ORTHO05D004983 3.7e-82 308.9 254 58.7
CsaV3_3G044320 Cucumis sativus L. HOM05D004171 ORTHO05D004983 3.7e-82 308.9 248 60.5
Lj3g0003583 Lotus japonicus HOM05D004171 ORTHO05D004983 4.9e-82 308.5 233 62.7
Eucgr.F01074 Eucalyptus grandis HOM05D004171 ORTHO05D004983 6.4e-82 308.1 236 62.7
PSO675G0635 Papaver somniferum HOM05D004171 ORTHO05D004983 8.3e-82 307.8 238 62.2
MBI02_g13230_MAGBIO Magnolia biondii HOM05D004171 ORTHO05D004983 1.1e-81 307.4 261 57.5
Aqoxy1G02716 Aquilegia oxysepala HOM05D004171 ORTHO05D004983 1.4e-81 307.0 256 58.2
MSTRG.14383 Avicennia marina HOM05D004171 ORTHO05D004983 1.9e-81 306.6 256 59.0
Migut.H01900 Erythranthe guttata HOM05D004171 ORTHO05D004983 1.9e-81 306.6 233 62.2
Lj1A854T34 Lonicera japonica HOM05D004171 ORTHO05D004983 2.4e-81 306.2 262 57.6
PSO541G5656 Papaver somniferum HOM05D004171 ORTHO05D004983 2.4e-81 306.2 238 62.2
Sabra11G0111100 Salix brachista HOM05D004171 ORTHO05D004983 2.4e-81 306.2 251 58.6
Glyma.12G218800 Glycine max HOM05D004171 ORTHO05D004983 7.0e-81 304.7 248 59.3
HanXRQChr02g0031371 Helianthus annuus HOM05D004171 ORTHO05D004983 7.0e-81 304.7 265 58.1
CAN.G162.108 Capsicum annuum HOM05D004171 ORTHO05D004983 9.2e-81 304.3 269 55.8
Ciclev10009152m.g Citrus clementina HOM05D004171 ORTHO05D004983 9.2e-81 304.3 252 58.7
Lalb_Chr19g0134521 Lupinus albus HOM05D004171 ORTHO05D004983 1.2e-80 303.9 230 61.3
GSVIVG01014444001 Vitis vinifera HOM05D004171 ORTHO05D004983 1.2e-80 303.9 231 63.2
Psat4g140880 Pisum sativum HOM05D004171 ORTHO05D004983 2.0e-80 303.1 233 62.7
VMungo1127G0586 Vigna mungo HOM05D004171 ORTHO05D004983 2.0e-80 303.1 234 60.3
Medtr8g464760 Medicago truncatula HOM05D004171 ORTHO05D004983 2.7e-80 302.8 236 61.4
TWI39G0675 Tripterygium wilfordii HOM05D004171 ORTHO05D004983 2.7e-80 302.8 232 62.1
CiPaw.11G177500 Carya illinoinensis HOM05D004171 ORTHO05D004983 3.5e-80 302.4 266 55.6
SGA_v2.0_scaffold9G04958 Striga asiatica HOM05D004171 ORTHO05D004983 3.5e-80 302.4 259 56.8
Manes.03G117000 Manihot esculenta HOM05D004171 ORTHO05D004983 4.6e-80 302.0 236 60.6
arahy.Tifrunner.gnm1.ann1.SXKR4Z Arachis hypogaea HOM05D004171 ORTHO05D004983 6.0e-80 301.6 256 57.4
PGR031G0147 Punica granatum HOM05D004171 ORTHO05D004983 1.0e-79 300.8 270 57.4
PGR083G0998 Punica granatum HOM05D004171 ORTHO05D004983 1.0e-79 300.8 259 56.8
Lsat_1_v5_gn_7_105981 Lactuca sativa HOM05D004171 ORTHO05D004983 1.3e-79 300.4 234 62.4
MD03G1217700 Malus domestica HOM05D004171 ORTHO05D004983 3.0e-79 299.3 255 56.9
CSS0026220 Camellia sinensis var. sinensis HOM05D004171 ORTHO05D004983 3.9e-79 298.9 264 57.2
Gohir.D13G148000 Gossypium hirsutum HOM05D004171 ORTHO05D004983 3.9e-79 298.9 265 55.5
Gorai.013G165800 Gossypium raimondii HOM05D004171 ORTHO05D004983 3.9e-79 298.9 265 55.5
Prupe.4G191500 Prunus persica HOM05D004171 ORTHO05D004983 3.9e-79 298.9 236 61.4
Ah.04g165380 Amaranthus hybridus HOM05D004171 ORTHO05D004983 5.0e-79 298.5 269 53.5
DCAR_009989 Daucus carota HOM05D004171 ORTHO05D004983 5.0e-79 298.5 233 61.8
Gohir.A13G143300 Gossypium hirsutum HOM05D004171 ORTHO05D004983 8.6e-79 297.7 245 58.4
Cfa020499 Carpinus fangiana HOM05D004171 ORTHO05D004983 1.1e-78 297.4 266 56.4
arahy.Tifrunner.gnm1.ann1.EUN1K4 Arachis hypogaea HOM05D004171 ORTHO05D004983 1.9e-78 296.6 234 60.3
ATR0693G292 Amborella trichopoda HOM05D004171 ORTHO05D004983 3.3e-78 295.8 233 59.2
arahy.Tifrunner.gnm1.ann1.H2QIWP Arachis hypogaea HOM05D004171 ORTHO05D004983 5.6e-78 295.0 259 54.4
arahy.Tifrunner.gnm1.ann1.UD3S3B Arachis hypogaea HOM05D004171 ORTHO05D004983 5.6e-78 295.0 259 54.4
Hund23371 Selenicereus undatus HOM05D004171 ORTHO05D004983 5.6e-78 295.0 233 58.4
Lalb_Chr01g0017051 Lupinus albus HOM05D004171 ORTHO05D004983 7.3e-78 294.7 234 57.7
THA.LOC104813397 Tarenaya hassleriana HOM05D004171 ORTHO05D004983 9.5e-78 294.3 241 57.7
Haze_09543 Corylus avellana HOM05D004171 ORTHO05D004983 1.6e-77 293.5 262 56.1
THA.LOC104799905 Tarenaya hassleriana HOM05D004171 ORTHO05D004983 2.1e-77 293.1 242 57.0
MD11G1235500 Malus domestica HOM05D004171 ORTHO05D004983 4.7e-77 292.0 232 59.9
BcaC04g20360 Brassica carinata HOM05D004171 ORTHO05D004983 6.2e-77 291.6 242 58.7
C09p44520 Brassica napus HOM05D004171 ORTHO05D004983 6.2e-77 291.6 242 58.7
BolC9t57324H Brassica oleracea HOM05D004171 ORTHO05D004983 6.2e-77 291.6 242 58.7
BraA10t43247Z Brassica rapa HOM05D004171 ORTHO05D004983 6.2e-77 291.6 242 58.7
AUR62015590 Chenopodium quinoa HOM05D004171 ORTHO05D004983 8.0e-77 291.2 235 58.3
Sc16g0006730 Simmondsia chinensis HOM05D004171 ORTHO05D004983 8.0e-77 291.2 229 59.0
vmacro11810 Vaccinium macrocarpon HOM05D004171 ORTHO05D004983 1.1e-76 290.8 229 60.3
Rhsim06G0192400 Rhododendron simsii HOM05D004171 ORTHO05D004983 1.4e-76 290.4 266 55.6
AUR62029303 Chenopodium quinoa HOM05D004171 ORTHO05D004983 1.8e-76 290.0 235 57.9
Oeu006766.1 Olea europaea HOM05D004171 ORTHO05D004983 1.8e-76 290.0 264 56.8
BcaC09g50581 Brassica carinata HOM05D004171 ORTHO05D004983 2.3e-76 289.7 267 53.9
BolC1t02294H Brassica oleracea HOM05D004171 ORTHO05D004983 2.3e-76 289.7 267 53.9
VMungo1080G1500 Vigna mungo HOM05D004171 ORTHO05D004983 3.1e-76 289.3 241 57.7
BcaB08g35778 Brassica carinata HOM05D004171 ORTHO05D004983 4.0e-76 288.9 242 57.9
RcHm_v2.0_Chr5g0036121 Rosa chinensis HOM05D004171 ORTHO05D004983 4.0e-76 288.9 250 56.4
A10p11530 Brassica napus HOM05D004171 ORTHO05D004983 5.2e-76 288.5 242 58.3
CiPaw.12G123300 Carya illinoinensis HOM05D004171 ORTHO05D004983 8.9e-76 287.7 268 54.1
ECA236G3492 Erigeron canadensis HOM05D004171 ORTHO05D004983 8.9e-76 287.7 257 55.6
C01p23480 Brassica napus HOM05D004171 ORTHO05D004983 1.5e-75 287.0 267 53.2
BraA02t06113Z Brassica rapa HOM05D004171 ORTHO05D004983 1.5e-75 287.0 242 57.0
BcaNung03036 Brassica carinata HOM05D004171 ORTHO05D004983 2.6e-75 286.2 268 53.0
BcaNung05201 Brassica carinata HOM05D004171 ORTHO05D004983 2.6e-75 286.2 268 53.0
Thhalv10025946m.g Eutrema salsugineum HOM05D004171 ORTHO05D004983 2.6e-75 286.2 242 56.2
AL8G29560 Arabidopsis lyrata HOM05D004171 ORTHO05D004983 3.4e-75 285.8 243 57.2
AT5G54240 Arabidopsis thaliana HOM05D004171 ORTHO05D004983 3.4e-75 285.8 265 54.0
BcaNung05200 Brassica carinata HOM05D004171 ORTHO05D004983 3.4e-75 285.8 267 53.2
A02p10500 Brassica napus HOM05D004171 ORTHO05D004983 3.4e-75 285.8 242 57.0
BcaB05g22115 Brassica carinata HOM05D004171 ORTHO05D004983 4.4e-75 285.4 242 57.0
CARHR267500 Cardamine hirsuta HOM05D004171 ORTHO05D004983 4.4e-75 285.4 249 56.2
A01p18530 Brassica napus HOM05D004171 ORTHO05D004983 5.8e-75 285.0 262 53.8
BraA01t01802Z Brassica rapa HOM05D004171 ORTHO05D004983 5.8e-75 285.0 262 53.8
Thhalv10014333m.g Eutrema salsugineum HOM05D004171 ORTHO05D004983 7.5e-75 284.6 242 56.6
AL7G25450 Arabidopsis lyrata HOM05D004171 ORTHO05D004983 9.8e-75 284.3 243 55.1
Sed0003677 Sechium edule HOM05D004171 ORTHO05D004983 9.8e-75 284.3 247 54.3
Sp6g16280 Schrenkiella parvula HOM05D004171 ORTHO05D004983 1.3e-74 283.9 242 56.6
AT4G27350 Arabidopsis thaliana HOM05D004171 ORTHO05D004983 1.7e-74 283.5 243 55.1
Aa31LG3G10200 Aethionema arabicum HOM05D004171 ORTHO05D004983 2.2e-74 283.1 242 56.6
CARHR235000 Cardamine hirsuta HOM05D004171 ORTHO05D004983 2.9e-74 282.7 263 52.9
Eucgr.F03360 Eucalyptus grandis HOM05D004171 ORTHO05D004983 4.9e-74 282.0 234 59.4
Carub.0007s1352 Capsella rubella HOM05D004171 ORTHO05D004983 1.4e-73 280.4 243 55.1
Carub.0008s1458 Capsella rubella HOM05D004171 ORTHO05D004983 1.4e-73 280.4 238 57.6
EL10Ac4g08047 Beta vulgaris HOM05D004171 ORTHO05D004983 2.4e-73 279.6 296 50.3
Sp7g25280 Schrenkiella parvula HOM05D004171 ORTHO05D004983 2.4e-73 279.6 243 53.5
FvH4_3g21110 Fragaria vesca HOM05D004171 ORTHO05D004983 4.1e-73 278.9 271 53.1
FAN25G0362 Fragaria x ananassa HOM05D004171 ORTHO05D004983 4.1e-73 278.9 271 53.1
BcaC09g50583 Brassica carinata HOM05D002586 ORTHO05D007009 5.4e-73 278.5 258 54.3
FAN16G3093 Fragaria x ananassa HOM05D004171 ORTHO05D004983 7.0e-73 278.1 271 53.5
MBI18_g19831_MAGBIO Magnolia biondii HOM05D004171 ORTHO05D004983 7.0e-73 278.1 232 55.2
FAN11G0158 Fragaria x ananassa HOM05D004171 ORTHO05D004983 1.6e-72 276.9 238 57.6
QL08p017518 Quercus lobata HOM05D004171 ORTHO05D004983 2.1e-72 276.6 238 56.7
CANSAT11G0840 Cannabis sativa HOM05D004171 ORTHO05D004983 7.8e-72 274.6 236 58.5
unitig_699.g19211 Utricularia gibba HOM05D004171 ORTHO05D004983 3.0e-71 272.7 255 53.7
Sed0025378 Sechium edule HOM05D004171 ORTHO05D004983 8.6e-71 271.2 249 54.2
Aa31LG5G10160 Aethionema arabicum HOM05D002586 ORTHO05D007009 1.9e-70 270.0 235 54.9
MBI18_g27681_MAGBIO Magnolia biondii HOM05D004171 ORTHO05D004983 2.5e-70 269.6 252 51.6
Gorai.004G029100 Gossypium raimondii HOM05D004171 ORTHO05D004983 5.6e-70 268.5 234 56.8
HPP92_012360 Vanilla planifolia HOM05D004171 ORTHO05D004983 5.6e-70 268.5 235 54.0
CDE02G1151 Ceratophyllum demersum HOM05D004171 ORTHO05D004983 1.2e-69 267.3 257 51.0
Gohir.A08G020900 Gossypium hirsutum HOM05D004171 ORTHO05D004983 2.8e-69 266.2 234 56.4
Aqoxy1G03898 Aquilegia oxysepala HOM05D004171 ORTHO05D004983 6.4e-66 255.0 222 54.1
FAN21G0927 Fragaria x ananassa HOM05D004171 ORTHO05D004983 1.0e-63 247.7 247 52.2
CDE01G0586 Ceratophyllum demersum HOM05D004171 ORTHO05D004983 4.3e-62 242.3 223 55.2
Mapoly0102s0009 Marchantia polymorpha HOM05D004171 ORTHO05D004983 7.6e-59 231.5 240 47.1
Potri.001G408001 Populus trichocarpa HOM05D004171 ORTHO05D004983 2.9e-58 229.6 181 58.6
CAN.G847.1 Capsicum annuum HOM05D004171 ORTHO05D004983 5.4e-57 225.3 199 55.8
Os07g0559400 Oryza sativa ssp. japonica HOM05D004171 ORTHO05D004983 9.2e-57 224.6 268 43.3
Zm00001eb324170 Zea mays HOM05D004171 ORTHO05D004983 1.3e-55 220.7 234 46.6
SMO116G0055 Selaginella moellendorffii HOM05D004171 ORTHO05D004983 6.6e-55 218.4 235 44.7
SEGI_27365 Sequoiadendron giganteum HOM05D004171 ORTHO05D004983 6.6e-55 218.4 189 54.0
Nn1g03875 Nelumbo nucifera HOM05D004171 ORTHO05D004983 1.0e-47 194.5 177 54.8
CAN.G187.6 Capsicum annuum HOM05D004171 ORTHO05D004983 1.7e-47 193.7 185 51.4
Pp3c3_11900 Physcomitrium patens HOM05D004171 ORTHO05D004983 3.9e-47 192.6 243 40.3
Oeu019367.1 Olea europaea HOM05D004171 ORTHO05D004983 6.9e-44 181.8 142 64.1
AagrBONN_evm.TU.Sc2ySwM_228.913 Anthoceros agrestis HOM05D004171 ORTHO05D004983 1.2e-40 171.0 205 43.9
Nn1g06780 Nelumbo nucifera HOM05D004171 ORTHO05D004983 7.9e-40 168.3 149 55.0
Ca_22993_v3 Cicer arietinum L. HOM05D004171 ORTHO05D004983 1.3e-39 167.5 142 54.2
Gohir.D08G031500 Gossypium hirsutum HOM05D004171 ORTHO05D004983 1.3e-39 167.5 134 60.4
CBR_g24077 Chara braunii HOM05D004171 ORTHO05D004983 1.8e-39 167.2 235 38.3
CDE12G0832 Ceratophyllum demersum HOM05D004171 ORTHO05D004983 1.6e-37 160.6 202 43.1
C02p17300 Brassica napus HOM05D004171 ORTHO05D004983 5.8e-27 125.6 107 55.1
BolC2t07830H Brassica oleracea HOM05D004171 ORTHO05D004983 5.8e-27 125.6 107 55.1
BolC2t07836H Brassica oleracea HOM05D004171 ORTHO05D004983 5.8e-27 125.6 107 55.1
CBR_g54085 Chara braunii HOM05D000019 ORTHO05D000002 1.5e-19 100.9 114 42.1
BcaNung05202 Brassica carinata HOM05D004171 ORTHO05D004983 2.1e-16 90.5 97 48.5
AL9U10820 Arabidopsis lyrata HOM05D004171 ORTHO05D004983 2.8e-13 80.1 74 51.4
CDE05G1305 Ceratophyllum demersum HOM05D004171 ORTHO05D004983 5.0e-10 69.3 165 29.1


User provided reference genes

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