Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_008651 Daucus carota HOM05D001098 ORTHO05D002527 1.5e-40 169.1 87 100.0
DCAR_006966 Daucus carota HOM05D001098 ORTHO05D002527 5.2e-25 117.5 107 59.8
Prupe.5G114600 Prunus persica HOM05D001098 ORTHO05D002527 2.9e-23 111.7 107 55.1
Dinv43895 Davidia involucrata HOM05D001098 ORTHO05D002527 4.9e-23 110.9 107 55.1
Oeu007848.1 Olea europaea HOM05D001098 ORTHO05D002527 4.9e-23 110.9 107 57.9
TAR629G1890 Trochodendron aralioides HOM05D001098 ORTHO05D002527 6.4e-23 110.5 107 57.0
MSTRG.20886 Avicennia marina HOM05D001098 ORTHO05D002527 1.1e-22 109.8 106 56.6
COL.COLO4_06326 Corchorus olitorius HOM05D001098 ORTHO05D002527 1.1e-22 109.8 107 57.0
Potri.001G094600 Populus trichocarpa HOM05D001098 ORTHO05D002527 1.1e-22 109.8 107 55.1
Thecc.01G347100 Theobroma cacao HOM05D001098 ORTHO05D002527 1.1e-22 109.8 107 57.0
Nn1g01805 Nelumbo nucifera HOM05D001098 ORTHO05D002527 1.4e-22 109.4 107 55.1
MD06G1101100 Malus domestica HOM05D001098 ORTHO05D002527 1.9e-22 109.0 107 54.2
MD14G1120800 Malus domestica HOM05D001098 ORTHO05D002527 1.9e-22 109.0 107 54.2
Ciclev10021053m.g Citrus clementina HOM05D001098 ORTHO05D002527 2.4e-22 108.6 107 54.2
Dinv32556 Davidia involucrata HOM05D001098 ORTHO05D002527 2.4e-22 108.6 107 54.2
SGA_v2.0_scaffold5G02988 Striga asiatica HOM05D001098 ORTHO05D002527 2.4e-22 108.6 106 56.6
Rhsim07G0006600 Rhododendron simsii HOM05D001098 ORTHO05D002527 3.2e-22 108.2 107 56.1
Lj7A503T49 Lonicera japonica HOM05D001098 ORTHO05D002527 4.1e-22 107.8 107 53.3
Cc02_g38980 Coffea canephora HOM05D001098 ORTHO05D002527 5.4e-22 107.5 107 53.3
TAR375G0190 Trochodendron aralioides HOM05D001098 ORTHO05D002527 5.4e-22 107.5 107 54.2
Hma1.2p1_0952F.1_g240870 Hydrangea macrophylla HOM05D001098 ORTHO05D002527 7.1e-22 107.1 107 54.2
Sabra03G0098300 Salix brachista HOM05D001098 ORTHO05D002527 7.1e-22 107.1 106 54.7
Potri.003G136800 Populus trichocarpa HOM05D001098 ORTHO05D002527 9.2e-22 106.7 107 54.2
CiPaw.11G124400 Carya illinoinensis HOM05D001098 ORTHO05D002527 1.2e-21 106.3 107 54.2
Cpa.g.sc2328.1 Carica papaya HOM05D001098 ORTHO05D002527 1.6e-21 105.9 107 55.1
Gohir.A12G110900 Gossypium hirsutum HOM05D001098 ORTHO05D002527 1.6e-21 105.9 107 54.2
Gorai.008G123700 Gossypium raimondii HOM05D001098 ORTHO05D002527 1.6e-21 105.9 107 54.2
PGR042G3574 Punica granatum HOM05D001098 ORTHO05D002527 2.7e-21 105.1 107 53.3
Migut.B01836 Erythranthe guttata HOM05D001098 ORTHO05D002527 3.5e-21 104.8 105 56.2
Eucgr.E00839 Eucalyptus grandis HOM05D001098 ORTHO05D002527 3.5e-21 104.8 107 54.2
Nn3g19085 Nelumbo nucifera HOM05D001098 ORTHO05D002527 4.6e-21 104.4 107 53.3
Atru.chr9.2056 Acer truncatum HOM05D001098 ORTHO05D002527 6.0e-21 104.0 107 54.2
CAN.G986.41 Capsicum annuum HOM05D001098 ORTHO05D002527 6.0e-21 104.0 107 52.3
Actinidia10106 Actinidia chinensis HOM05D001098 ORTHO05D002527 7.8e-21 103.6 107 54.2
Aa31LG9G370 Aethionema arabicum HOM05D001098 ORTHO05D002527 7.8e-21 103.6 107 53.3
AL7G47530 Arabidopsis lyrata HOM05D001098 ORTHO05D002527 7.8e-21 103.6 107 54.2
ClCG08G003850 Citrullus lanatus HOM05D001098 ORTHO05D002527 7.8e-21 103.6 107 55.1
Thhalv10027829m.g Eutrema salsugineum HOM05D001098 ORTHO05D002527 7.8e-21 103.6 107 55.1
FvH4_5g03970 Fragaria vesca HOM05D001098 ORTHO05D002527 7.8e-21 103.6 102 52.9
FAN04G0784 Fragaria x ananassa HOM05D001098 ORTHO05D002527 7.8e-21 103.6 102 52.9
FAN08G0493 Fragaria x ananassa HOM05D001098 ORTHO05D002527 7.8e-21 103.6 102 52.9
FAN13G0365 Fragaria x ananassa HOM05D001098 ORTHO05D002527 7.8e-21 103.6 102 52.9
FAN18G3402 Fragaria x ananassa HOM05D001098 ORTHO05D002527 7.8e-21 103.6 102 52.9
Lj9C592G6 Lonicera japonica HOM05D001098 ORTHO05D002527 7.8e-21 103.6 107 54.2
BcaB06g27663 Brassica carinata HOM05D001098 ORTHO05D002527 1.0e-20 103.2 107 54.2
BcaNung04604 Brassica carinata HOM05D001098 ORTHO05D002527 1.0e-20 103.2 107 54.2
A04p14920 Brassica napus HOM05D001098 ORTHO05D002527 1.0e-20 103.2 107 54.2
BraA04t17130Z Brassica rapa HOM05D001098 ORTHO05D002527 1.0e-20 103.2 107 54.2
ECA234G3902 Erigeron canadensis HOM05D001098 ORTHO05D002527 1.0e-20 103.2 107 53.3
Manes.02G013500 Manihot esculenta HOM05D001098 ORTHO05D002527 1.0e-20 103.2 109 55.0
MBI17_g17491_MAGBIO Magnolia biondii HOM05D001098 ORTHO05D002527 1.3e-20 102.8 99 56.6
RcHm_v2.0_Chr7g0195531 Rosa chinensis HOM05D001098 ORTHO05D002527 1.7e-20 102.4 102 52.9
Glyma.19G253600 Glycine max HOM05D001098 ORTHO05D002527 2.3e-20 102.1 106 51.9
PGSC0003DMG400000209 Solanum tuberosum HOM05D001098 ORTHO05D002527 2.3e-20 102.1 107 53.3
Hma1.2p1_0077F.1_g039790 Hydrangea macrophylla HOM05D001098 ORTHO05D002527 3.0e-20 101.7 107 50.5
Nitab4.5_0000305g0120 Nicotiana tabacum HOM05D001098 ORTHO05D002527 3.9e-20 101.3 107 50.5
TPR.G5344 Trifolium pratense HOM05D001098 ORTHO05D002527 3.9e-20 101.3 107 51.4
Ah.12g052240 Amaranthus hybridus HOM05D001098 ORTHO05D002527 5.1e-20 100.9 103 55.3
Gohir.D11G099900 Gossypium hirsutum HOM05D001098 ORTHO05D002527 5.1e-20 100.9 107 54.2
Manes.05G025700 Manihot esculenta HOM05D001098 ORTHO05D002527 5.1e-20 100.9 107 54.2
Gorai.007G106100 Gossypium raimondii HOM05D001098 ORTHO05D002527 6.6e-20 100.5 107 53.3
Peaxi162Scf01012g00019 Petunia axillaris HOM05D001098 ORTHO05D002527 6.6e-20 100.5 107 51.4
Sopen01g039290 Solanum pennellii HOM05D001098 ORTHO05D002527 6.6e-20 100.5 107 52.3
AT5G41760 Arabidopsis thaliana HOM05D001098 ORTHO05D002527 8.6e-20 100.1 107 52.3
Lalb_Chr04g0261781 Lupinus albus HOM05D001098 ORTHO05D002527 8.6e-20 100.1 106 50.9
THA.LOC104823607 Tarenaya hassleriana HOM05D001098 ORTHO05D002527 8.6e-20 100.1 107 51.4
VMungo0540G0619 Vigna mungo HOM05D001098 ORTHO05D002527 8.6e-20 100.1 103 53.4
Carub.0007s3364 Capsella rubella HOM05D001098 ORTHO05D002527 1.1e-19 99.8 107 53.3
Glyma.03G255900 Glycine max HOM05D001098 ORTHO05D002527 1.1e-19 99.8 106 51.9
Gohir.A11G094900 Gossypium hirsutum HOM05D001098 ORTHO05D002527 1.1e-19 99.8 107 53.3
BcaC02g08931 Brassica carinata HOM05D001098 ORTHO05D002527 1.5e-19 99.4 107 53.3
C04p48990 Brassica napus HOM05D001098 ORTHO05D002527 1.5e-19 99.4 107 53.3
BolC4t26481H Brassica oleracea HOM05D001098 ORTHO05D002527 1.5e-19 99.4 107 53.3
Nitab4.5_0013597g0010 Nicotiana tabacum HOM05D001098 ORTHO05D002527 1.5e-19 99.4 107 50.5
CDE04G3071 Ceratophyllum demersum HOM05D001098 ORTHO05D002527 1.9e-19 99.0 107 48.6
CsaV3_6G003980 Cucumis sativus L. HOM05D001098 ORTHO05D002527 1.9e-19 99.0 109 52.3
QL04p058262 Quercus lobata HOM05D001098 ORTHO05D002527 2.5e-19 98.6 107 50.5
GSVIVG01027052001 Vitis vinifera HOM05D001098 ORTHO05D002527 2.5e-19 98.6 107 52.3
CiPaw.12G085200 Carya illinoinensis HOM05D001098 ORTHO05D002527 3.3e-19 98.2 97 56.7
MELO3C011675.2 Cucumis melo HOM05D001098 ORTHO05D002527 3.3e-19 98.2 108 54.6
Phvul.006G110600 Phaseolus vulgaris HOM05D001098 ORTHO05D002527 3.3e-19 98.2 103 51.5
Haze_00096 Corylus avellana HOM05D001098 ORTHO05D002527 5.6e-19 97.4 127 44.1
Medtr7g117060 Medicago truncatula HOM05D001098 ORTHO05D002527 5.6e-19 97.4 107 48.6
CSS0016031 Camellia sinensis var. sinensis HOM05D001098 ORTHO05D002527 7.3e-19 97.1 107 50.5
CSS0044943 Camellia sinensis var. sinensis HOM05D001098 ORTHO05D002527 7.3e-19 97.1 107 50.5
Lsat_1_v5_gn_3_139161 Lactuca sativa HOM05D001098 ORTHO05D002527 7.3e-19 97.1 107 53.3
Psat3g003160 Pisum sativum HOM05D001098 ORTHO05D002527 7.3e-19 97.1 107 49.5
TWI23G1043 Tripterygium wilfordii HOM05D001098 ORTHO05D002527 7.3e-19 97.1 103 54.4
Ca_09495_v3 Cicer arietinum L. HOM05D001098 ORTHO05D002527 9.5e-19 96.7 103 49.5
arahy.Tifrunner.gnm1.ann1.74EJA4 Arachis hypogaea HOM05D001098 ORTHO05D002527 2.1e-18 95.5 110 50.9
arahy.Tifrunner.gnm1.ann1.W5G0Q3 Arachis hypogaea HOM05D001098 ORTHO05D002527 2.1e-18 95.5 110 50.9
Rhsim07G0084500 Rhododendron simsii HOM05D001098 ORTHO05D002527 2.1e-18 95.5 100 54.0
vmacro13917 Vaccinium macrocarpon HOM05D001098 ORTHO05D002527 2.1e-18 95.5 107 48.6
QL04p059398 Quercus lobata HOM05D001098 ORTHO05D002527 2.8e-18 95.1 107 48.6
AUR62019800 Chenopodium quinoa HOM05D001098 ORTHO05D002527 4.7e-18 94.4 103 50.5
Lj1g0005672 Lotus japonicus HOM05D001098 ORTHO05D002527 4.7e-18 94.4 106 48.1
Solyc01g095540.3 Solanum lycopersicum HOM05D001098 ORTHO05D002527 4.7e-18 94.4 100 53.0
arahy.Tifrunner.gnm1.ann1.SLE9L7 Arachis hypogaea HOM05D001098 ORTHO05D002527 6.2e-18 94.0 107 52.3
unitig_747.g21326 Utricularia gibba HOM05D004050 ORTHO05D005162 6.2e-18 94.0 103 52.4
AUR62010803 Chenopodium quinoa HOM05D001098 ORTHO05D002527 8.1e-18 93.6 103 50.5
Dinv37554 Davidia involucrata HOM05D001098 ORTHO05D002527 8.1e-18 93.6 107 49.5
Sc01g0010110 Simmondsia chinensis HOM05D001098 ORTHO05D002527 1.4e-17 92.8 103 51.5
EL10Ac5g12877 Beta vulgaris HOM05D001098 ORTHO05D002527 1.8e-17 92.4 105 52.4
CSS0035352 Camellia sinensis var. sinensis HOM05D001098 ORTHO05D002527 6.8e-17 90.5 103 51.5
ATR0796G272 Amborella trichopoda HOM05D001098 ORTHO05D002527 8.9e-17 90.1 103 50.5
HanXRQChr11g0353061 Helianthus annuus HOM05D001098 ORTHO05D002527 1.2e-16 89.7 92 56.5
Aqoxy1G01619 Aquilegia oxysepala HOM05D001098 ORTHO05D002527 1.5e-16 89.4 103 51.5
Aqoxy5G04128 Aquilegia oxysepala HOM05D001098 ORTHO05D002527 1.5e-16 89.4 103 51.5
PSO063G3657 Papaver somniferum HOM05D001098 ORTHO05D002527 1.5e-16 89.4 104 49.0
PSO170G1456 Papaver somniferum HOM05D001098 ORTHO05D002527 4.4e-16 87.8 104 48.1
HPP92_024019 Vanilla planifolia HOM05D001098 ORTHO05D002527 3.8e-15 84.7 102 47.1
Os06g0523400 Oryza sativa ssp. japonica HOM05D001098 ORTHO05D002527 8.4e-15 83.6 87 52.9
SEGI_22114 Sequoiadendron giganteum HOM05D001098 ORTHO05D002527 1.4e-14 82.8 107 44.9
Zm00001eb382810 Zea mays HOM05D001098 ORTHO05D002527 3.2e-14 81.6 87 51.7
SMO141G0118 Selaginella moellendorffii HOM05D001098 ORTHO05D002527 1.6e-13 79.3 94 47.9
Cfa012849 Carpinus fangiana HOM05D001098 ORTHO05D002527 1.7e-12 75.9 110 41.8
SHI13106 Sapria himalayana HOM05D001098 ORTHO05D002527 1.1e-11 73.2 96 43.8
Mapoly0012s0161 Marchantia polymorpha HOM05D001098 ORTHO05D002527 2.1e-10 68.9 89 44.9
QL02p031533 Quercus lobata HOM05D001098 ORTHO05D002527 2.1e-10 68.9 48 64.6
Pp3c5_28860 Physcomitrium patens HOM05D001098 ORTHO05D002527 2.8e-10 68.6 84 44.0
vmacro13191 Vaccinium macrocarpon HOM05D001098 ORTHO05D002527 2.4e-09 65.5 62 51.6
Sed0022439 Sechium edule HOM05D001098 ORTHO05D002527 4.0e-09 64.7 60 53.3
Carub.0007s3368 Capsella rubella HOM05D001098 ORTHO05D002527 5.3e-09 64.3 73 52.1
Gohir.D12G114200 Gossypium hirsutum HOM05D001098 ORTHO05D002527 6.9e-09 63.9 62 53.2
Haze_08676 Corylus avellana HOM05D001098 ORTHO05D002527 9.0e-09 63.5 42 73.8
QL02p031530 Quercus lobata HOM05D001098 ORTHO05D002527 2.0e-08 62.4 36 75.0
Actinidia20200 Actinidia chinensis HOM05D001098 ORTHO05D002527 3.4e-08 61.6 37 78.4


User provided reference genes

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