Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_008647 Daucus carota HOM05D001031 ORTHO05D000857 5.9e-60 234.2 133 100.0
CSS0015581 Camellia sinensis var. sinensis HOM05D001031 ORTHO05D000857 1.0e-19 100.5 145 37.2
DCAR_006960 Daucus carota HOM05D001031 ORTHO05D000857 1.3e-19 100.1 138 37.7
MSTRG.17314 Avicennia marina HOM05D001031 ORTHO05D000857 5.0e-19 98.2 140 35.7
Nitab4.5_0000305g0250 Nicotiana tabacum HOM05D001031 ORTHO05D000857 1.1e-18 97.1 143 37.8
Cc02_g38870 Coffea canephora HOM05D001031 ORTHO05D000857 1.9e-18 96.3 148 37.2
Peaxi162Scf01012g00026 Petunia axillaris HOM05D001031 ORTHO05D000857 1.9e-18 96.3 143 37.8
Dinv43887 Davidia involucrata HOM05D001031 ORTHO05D000857 5.5e-18 94.7 141 36.9
DCAR_005373 Daucus carota HOM05D001031 ORTHO05D000857 7.2e-18 94.4 142 37.3
Ciclev10023512m.g Citrus clementina HOM05D001031 ORTHO05D000857 9.5e-18 94.0 147 34.0
Nitab4.5_0004613g0030 Nicotiana tabacum HOM05D001031 ORTHO05D000857 1.2e-17 93.6 143 35.0
CAN.G986.53 Capsicum annuum HOM05D001031 ORTHO05D000857 1.6e-17 93.2 144 37.5
Atru.chr5.610 Acer truncatum HOM05D001031 ORTHO05D000857 1.0e-16 90.5 140 32.1
TWI59G0335 Tripterygium wilfordii HOM05D001031 ORTHO05D000857 4.0e-16 88.6 139 36.7
TWI14G0124 Tripterygium wilfordii HOM05D001031 ORTHO05D000857 5.2e-16 88.2 139 34.5
PGSC0003DMG400000087 Solanum tuberosum HOM05D001031 ORTHO05D000857 1.2e-15 87.0 139 36.7
Sopen01g039190 Solanum pennellii HOM05D001031 ORTHO05D000857 7.5e-15 84.3 129 40.3
Oeu063659.1 Olea europaea HOM05D001031 ORTHO05D000857 1.3e-14 83.6 141 33.3
Hma1.2p1_0397F.1_g143800 Hydrangea macrophylla HOM05D001031 ORTHO05D000857 2.2e-14 82.8 136 34.6
Solyc01g095440.2 Solanum lycopersicum HOM05D001031 ORTHO05D000857 2.2e-14 82.8 127 36.2
TAR636G2615 Trochodendron aralioides HOM05D001031 ORTHO05D000857 2.8e-14 82.4 130 31.5
ClCG06G003280 Citrullus lanatus HOM05D001031 ORTHO05D000857 4.9e-14 81.6 143 28.7
Duzib268G1251 Durio zibethinus HOM05D001031 ORTHO05D000857 4.9e-14 81.6 136 28.7
Rhsim07G0007800 Rhododendron simsii HOM05D001031 ORTHO05D000857 1.4e-13 80.1 151 29.1
Oeu063657.1 Olea europaea HOM05D001031 ORTHO05D000857 3.2e-13 79.0 128 33.6
Thecc.01G348700 Theobroma cacao HOM05D001031 ORTHO05D000857 3.2e-13 79.0 136 30.1
Rhsim02G0239500 Rhododendron simsii HOM05D001031 ORTHO05D000857 4.1e-13 78.6 129 31.0
Oeu007841.1 Olea europaea HOM05D001031 ORTHO05D000857 5.4e-13 78.2 140 32.1
Migut.N01568 Erythranthe guttata HOM05D001031 ORTHO05D000857 7.0e-13 77.8 142 33.1
Prupe.2G182600 Prunus persica HOM05D001031 ORTHO05D000857 9.2e-13 77.4 147 31.3
COL.COLO4_06344 Corchorus olitorius HOM05D001031 ORTHO05D000857 1.6e-12 76.6 137 31.4
CsaV3_6G001000 Cucumis sativus L. HOM05D001031 ORTHO05D000857 1.6e-12 76.6 142 29.6
Sed0011353 Sechium edule HOM05D001031 ORTHO05D000857 2.7e-12 75.9 148 30.4
FvH4_7g15770 Fragaria vesca HOM05D001031 ORTHO05D000857 3.5e-12 75.5 148 31.1
FAN06G4913 Fragaria x ananassa HOM05D001031 ORTHO05D000857 3.5e-12 75.5 148 31.1
MD07G1143400 Malus domestica HOM05D001031 ORTHO05D000857 4.5e-12 75.1 141 29.8
Sabra02G0144700 Salix brachista HOM05D001031 ORTHO05D000857 5.9e-12 74.7 138 31.2
MD01G1074500 Malus domestica HOM05D001031 ORTHO05D000857 7.8e-12 74.3 142 28.2
Manes.05G026800 Manihot esculenta HOM05D001031 ORTHO05D000857 7.8e-12 74.3 135 29.6
FAN06G1625 Fragaria x ananassa HOM05D001031 ORTHO05D000857 1.0e-11 73.9 135 31.9
COL.COLO4_21744 Corchorus olitorius HOM05D001031 ORTHO05D000857 2.3e-11 72.8 137 30.7
SGA_v2.0_scaffold4G02261 Striga asiatica HOM05D001031 ORTHO05D000857 2.3e-11 72.8 108 33.3
MELO3C021169.2 Cucumis melo HOM05D001031 ORTHO05D000857 2.9e-11 72.4 142 28.9
VMungo0251G2934 Vigna mungo HOM05D001031 ORTHO05D000857 2.9e-11 72.4 130 30.0
Migut.B01825 Erythranthe guttata HOM05D001031 ORTHO05D000857 3.9e-11 72.0 125 32.0
vmacro13203 Vaccinium macrocarpon HOM05D001031 ORTHO05D000857 3.9e-11 72.0 121 28.9
Dinv38879 Davidia involucrata HOM05D001597 ORTHO05D001512 5.0e-11 71.6 128 28.9
Lj4g0028162 Lotus japonicus HOM05D001031 ORTHO05D000857 5.0e-11 71.6 122 32.8
MBI07_g11387_MAGBIO Magnolia biondii HOM05D001031 ORTHO05D000857 5.0e-11 71.6 146 28.8
PGR031G0286 Punica granatum HOM05D001031 ORTHO05D000857 5.0e-11 71.6 116 31.0
QL04p059752 Quercus lobata HOM05D001031 ORTHO05D000857 5.0e-11 71.6 121 29.8
FAN01G1418 Fragaria x ananassa HOM05D001031 ORTHO05D000857 6.6e-11 71.2 148 29.7
FAN10G3247 Fragaria x ananassa HOM05D001031 ORTHO05D000857 6.6e-11 71.2 148 29.7
FAN10G0818 Fragaria x ananassa HOM05D001031 ORTHO05D000857 1.1e-10 70.5 150 29.3
Lalb_Chr17g0342231 Lupinus albus HOM05D001031 ORTHO05D000857 1.5e-10 70.1 141 30.5
Phvul.002G295100 Phaseolus vulgaris HOM05D001031 ORTHO05D000857 1.5e-10 70.1 131 30.5
Glyma.08G020400 Glycine max HOM05D001031 ORTHO05D000857 1.9e-10 69.7 133 28.6
PGR031G2654 Punica granatum HOM05D001031 ORTHO05D000857 2.5e-10 69.3 131 32.1
Glyma.05G213900 Glycine max HOM05D001031 ORTHO05D000857 3.3e-10 68.9 131 28.2
Thecc.03G290900 Theobroma cacao HOM05D001031 ORTHO05D000857 3.3e-10 68.9 133 29.3
Duzib205G0348 Durio zibethinus HOM05D001031 ORTHO05D000857 4.3e-10 68.6 136 28.7
Gohir.A02G102901 Gossypium hirsutum HOM05D001031 ORTHO05D000857 5.6e-10 68.2 133 27.1
CiPaw.01G070800 Carya illinoinensis HOM05D001031 ORTHO05D000857 7.3e-10 67.8 120 30.8
Gohir.D03G081000 Gossypium hirsutum HOM05D001031 ORTHO05D000857 7.3e-10 67.8 133 27.1
Gorai.003G082800 Gossypium raimondii HOM05D001031 ORTHO05D000857 7.3e-10 67.8 133 27.1
SGA_v2.0_scaffold11G05712 Striga asiatica HOM05D001031 ORTHO05D000857 9.5e-10 67.4 136 27.9
Ciclev10024134m.g Citrus clementina HOM05D001031 ORTHO05D000857 1.6e-09 66.6 135 26.7
Migut.A00691 Erythranthe guttata HOM05D001031 ORTHO05D000857 1.6e-09 66.6 136 25.0
Manes.02G013832 Manihot esculenta HOM05D001031 ORTHO05D000857 1.6e-09 66.6 136 28.7
Nn7g37365 Nelumbo nucifera HOM05D001031 ORTHO05D000857 1.6e-09 66.6 141 26.2
Oeu003350.1 Olea europaea HOM05D001031 ORTHO05D000857 2.8e-09 65.9 128 29.7
SalBow8G2934 Salvia bowleyana HOM05D001031 ORTHO05D000857 2.8e-09 65.9 126 31.7
Ca_17503_v3 Cicer arietinum L. HOM05D001031 ORTHO05D000857 3.6e-09 65.5 128 27.3
Lalb_Chr16g0390401 Lupinus albus HOM05D001031 ORTHO05D000857 3.6e-09 65.5 133 27.8
RcHm_v2.0_Chr1g0358561 Rosa chinensis HOM05D001031 ORTHO05D000857 3.6e-09 65.5 152 27.6
Sabra01G0071800 Salix brachista HOM05D001031 ORTHO05D000857 4.7e-09 65.1 136 27.2
MSTRG.11942 Avicennia marina HOM05D001031 ORTHO05D000857 8.0e-09 64.3 133 27.1
Cpa.g.sc184.2 Carica papaya HOM05D001031 ORTHO05D000857 8.0e-09 64.3 128 27.3
HanXRQChr15g0489251 Helianthus annuus HOM05D001031 ORTHO05D000857 8.0e-09 64.3 130 29.2
Peaxi162Scf00074g00142 Petunia axillaris HOM05D001031 ORTHO05D000857 8.0e-09 64.3 127 29.9
QL02p031937 Quercus lobata HOM05D001031 ORTHO05D000857 8.0e-09 64.3 131 27.5
Eucgr.D01780 Eucalyptus grandis HOM05D001031 ORTHO05D000857 1.0e-08 63.9 132 28.0
Cc08_g15590 Coffea canephora HOM05D001597 ORTHO05D001512 1.4e-08 63.5 138 30.4
Dinv32546 Davidia involucrata HOM05D001031 ORTHO05D000857 1.4e-08 63.5 52 50.0
Sabra01G0071600 Salix brachista HOM05D001031 ORTHO05D000857 1.4e-08 63.5 136 26.5
Lalb_Chr05g0224331 Lupinus albus HOM05D001031 ORTHO05D000857 2.3e-08 62.8 124 27.4
Nitab4.5_0002564g0060 Nicotiana tabacum HOM05D001597 ORTHO05D001512 2.3e-08 62.8 136 30.1
Aqoxy5G04031 Aquilegia oxysepala HOM05D001031 ORTHO05D000857 3.1e-08 62.4 126 27.8
Hma1.2p1_0216F.1_g091380 Hydrangea macrophylla HOM05D001031 ORTHO05D000857 3.1e-08 62.4 132 28.0
TAR633G2690 Trochodendron aralioides HOM05D001031 ORTHO05D000857 3.1e-08 62.4 141 30.5
Nitab4.5_0000223g0020 Nicotiana tabacum HOM05D001597 ORTHO05D001512 4.0e-08 62.0 136 30.1
Cpa.g.sc122.19 Carica papaya HOM05D001031 ORTHO05D000857 5.2e-08 61.6 133 27.1
PSO384G0391 Papaver somniferum HOM05D001031 ORTHO05D000857 6.8e-08 61.2 123 31.7
Solyc08g081850.1 Solanum lycopersicum HOM05D001031 ORTHO05D000857 6.8e-08 61.2 137 27.7
THA.LOC104801383 Tarenaya hassleriana HOM05D001031 ORTHO05D000857 6.8e-08 61.2 127 41.7
HanXRQChr11g0353051 Helianthus annuus HOM05D001031 ORTHO05D000857 8.9e-08 60.8 145 31.0
Oeu026928.2 Olea europaea HOM05D001031 ORTHO05D000857 8.9e-08 60.8 164 29.3
Potri.001G096000 Populus trichocarpa HOM05D001031 ORTHO05D000857 1.2e-07 60.5 124 27.4
CANSAT56G2297 Cannabis sativa HOM05D001031 ORTHO05D000857 1.5e-07 60.1 144 27.8
CAN.G532.59 Capsicum annuum HOM05D001031 ORTHO05D000857 1.5e-07 60.1 136 27.2
HanXRQChr06g0170481 Helianthus annuus HOM05D001031 ORTHO05D000857 1.5e-07 60.1 135 28.9
Oeu063056.1 Olea europaea HOM05D001031 ORTHO05D000857 1.5e-07 60.1 133 25.6
Actinidia04221 Actinidia chinensis HOM05D001597 ORTHO05D001512 2.0e-07 59.7 129 24.0
Cfa012284 Carpinus fangiana HOM05D001031 ORTHO05D000857 2.0e-07 59.7 132 28.8
Haze_08700 Corylus avellana HOM05D001031 ORTHO05D000857 2.0e-07 59.7 132 28.0
Lj2P173T35 Lonicera japonica HOM05D001031 ORTHO05D000857 2.0e-07 59.7 129 26.4
CiPaw.11G125900 Carya illinoinensis HOM05D001031 ORTHO05D000857 2.6e-07 59.3 130 29.2
Sabra04G0157500 Salix brachista HOM05D001031 ORTHO05D000857 2.6e-07 59.3 156 29.5
PSO135G0832 Papaver somniferum HOM05D001031 ORTHO05D000857 3.4e-07 58.9 123 30.9
SalBow3G3545 Salvia bowleyana HOM05D001031 ORTHO05D000857 3.4e-07 58.9 129 38.0
CSS0005630 Camellia sinensis var. sinensis HOM05D001031 ORTHO05D000857 4.4e-07 58.5 114 29.8
Sabra03G0097600 Salix brachista HOM05D001031 ORTHO05D000857 4.4e-07 58.5 119 27.7
Sopen08g030160 Solanum pennellii HOM05D001031 ORTHO05D000857 5.8e-07 58.2 137 27.0
Sed0015825 Sechium edule HOM05D001031 ORTHO05D000857 7.5e-07 57.8 134 24.6
MELO3C016318.2 Cucumis melo HOM05D001031 ORTHO05D000857 1.7e-06 56.6 134 23.1
Lalb_Chr04g0254601 Lupinus albus HOM05D001031 ORTHO05D000857 1.7e-06 56.6 134 36.6
ClCG07G014790 Citrullus lanatus HOM05D001031 ORTHO05D000857 2.2e-06 56.2 134 22.4
Gohir.A12G110500 Gossypium hirsutum HOM05D001031 ORTHO05D000857 2.2e-06 56.2 140 25.7
AUR62004440 Chenopodium quinoa HOM05D001031 ORTHO05D000857 2.9e-06 55.8 156 24.4
Potri.003G135400 Populus trichocarpa HOM05D001031 ORTHO05D000857 2.9e-06 55.8 112 26.8
EL10Ac1g00322 Beta vulgaris HOM05D001031 ORTHO05D000857 3.7e-06 55.5 152 26.3
Potri.016G141100 Populus trichocarpa HOM05D001031 ORTHO05D000857 3.7e-06 55.5 159 28.9
PGR031G2938 Punica granatum HOM05D001031 ORTHO05D000857 3.7e-06 55.5 138 26.8


User provided reference genes

Program Settings