Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_008512 Daucus carota HOM05D005461 ORTHO05D022481 1.0e-108 396.7 197 100.0
DCAR_015831 Daucus carota HOM05D005461 ORTHO05D022481 5.0e-108 394.4 196 100.0
DCAR_009923 Daucus carota HOM05D005461 ORTHO05D022481 5.8e-96 354.4 181 97.8
DCAR_030492 Daucus carota HOM05D005461 ORTHO05D022481 1.3e-95 353.2 180 97.8
DCAR_016328 Daucus carota HOM05D002313 ORTHO05D007157 1.2e-85 320.1 176 91.5
DCAR_028867 Daucus carota HOM05D005461 ORTHO05D022481 8.6e-76 287.3 143 100.0
DCAR_016327 Daucus carota HOM05D005461 ORTHO05D007157 6.0e-69 264.6 177 75.7
Dinv23244 Davidia involucrata HOM05D005461 ORTHO05D007157 1.4e-57 226.9 177 65.5
GSVIVG01019287001 Vitis vinifera HOM05D005461 ORTHO05D007157 5.8e-56 221.5 163 66.9
GSVIVG01019284001 Vitis vinifera HOM05D005461 ORTHO05D007157 7.6e-56 221.1 177 62.7
GSVIVG01019282001 Vitis vinifera HOM05D005461 ORTHO05D007157 1.7e-55 219.9 176 63.6
Oeu012857.1 Olea europaea HOM05D005461 ORTHO05D007157 8.4e-55 217.6 153 71.2
Rhsim08G0199900 Rhododendron simsii HOM05D005461 ORTHO05D007157 4.6e-53 211.8 166 65.1
MD00G1076700 Malus domestica HOM05D005461 ORTHO05D007157 2.3e-52 209.5 153 66.7
Hma1.2p1_1242F.1_g269870 Hydrangea macrophylla HOM05D005461 ORTHO05D007157 5.1e-52 208.4 149 71.8
TWI23G0268 Tripterygium wilfordii HOM05D005461 ORTHO05D007157 8.7e-52 207.6 176 58.5
QL10p000170 Quercus lobata HOM05D005461 ORTHO05D007157 1.5e-51 206.8 173 60.1
Cfa018691 Carpinus fangiana HOM05D005461 ORTHO05D007157 1.9e-51 206.5 172 61.0
Ciclev10030921m.g Citrus clementina HOM05D005461 ORTHO05D007157 1.9e-51 206.5 173 60.1
Lsat_1_v5_gn_5_9480 Lactuca sativa HOM05D005461 ORTHO05D007157 2.5e-51 206.1 158 65.2
Thecc.03G143100 Theobroma cacao HOM05D005461 ORTHO05D007157 2.5e-51 206.1 173 61.8
CSS0038399 Camellia sinensis var. sinensis HOM05D005461 ORTHO05D007157 3.3e-51 205.7 176 61.9
Gorai.012G153500 Gossypium raimondii HOM05D005461 ORTHO05D007157 3.3e-51 205.7 164 62.8
Cpa.g.sc13.197 Carica papaya HOM05D005461 ORTHO05D007157 4.3e-51 205.3 158 63.9
Gohir.D04G165100 Gossypium hirsutum HOM05D005461 ORTHO05D007157 5.6e-51 204.9 163 63.2
Lalb_Chr07g0183921 Lupinus albus HOM05D005461 ORTHO05D007157 5.6e-51 204.9 175 61.7
CsaV3_3G003620 Cucumis sativus L. HOM05D005461 ORTHO05D007157 7.4e-51 204.5 172 60.5
Potri.015G109400 Populus trichocarpa HOM05D005461 ORTHO05D007157 7.4e-51 204.5 167 59.3
Prupe.5G138700 Prunus persica HOM05D005461 ORTHO05D007157 9.6e-51 204.1 153 65.4
Gohir.D12G197200 Gossypium hirsutum HOM05D005461 ORTHO05D007157 1.3e-50 203.8 163 63.2
CiPaw.11G031400 Carya illinoinensis HOM05D005461 ORTHO05D007157 2.1e-50 203.0 166 61.4
MELO3C014033.2 Cucumis melo HOM05D005461 ORTHO05D007157 2.1e-50 203.0 154 65.6
vmacro19100 Vaccinium macrocarpon HOM05D005461 ORTHO05D007157 3.7e-50 202.2 177 59.9
Aa31LG1G5760 Aethionema arabicum HOM05D005461 ORTHO05D007157 4.8e-50 201.8 158 62.7
Migut.I00655 Erythranthe guttata HOM05D005461 ORTHO05D007157 8.1e-50 201.1 167 61.7
Haze_05604 Corylus avellana HOM05D005461 ORTHO05D007157 1.1e-49 200.7 173 60.1
Gohir.A12G194850 Gossypium hirsutum HOM05D005461 ORTHO05D022481 1.1e-49 200.7 163 62.0
ClCG10G003620 Citrullus lanatus HOM05D005461 ORTHO05D007157 1.4e-49 200.3 161 62.7
Oeu036712.1 Olea europaea HOM05D005461 ORTHO05D007157 1.8e-49 199.9 153 66.0
Manes.14G043000 Manihot esculenta HOM05D005461 ORTHO05D007157 2.4e-49 199.5 158 60.1
RcHm_v2.0_Chr7g0188291 Rosa chinensis HOM05D005461 ORTHO05D007157 3.1e-49 199.1 153 65.4
SGA_v2.0_scaffold5G02813 Striga asiatica HOM05D005461 ORTHO05D007157 5.3e-49 198.4 175 60.0
Actinidia18282 Actinidia chinensis HOM05D005461 ORTHO05D007157 9.0e-49 197.6 166 61.4
COL.COLO4_37281 Corchorus olitorius HOM05D005461 ORTHO05D007157 9.0e-49 197.6 173 61.3
Manes.14G043100 Manihot esculenta HOM05D005461 ORTHO05D007157 9.0e-49 197.6 169 56.2
Sed0004824 Sechium edule HOM05D005461 ORTHO05D007157 9.0e-49 197.6 176 56.2
CAN.G1089.9 Capsicum annuum HOM05D005461 ORTHO05D007157 1.5e-48 196.8 176 58.0
HanXRQChr06g0183731 Helianthus annuus HOM05D005461 ORTHO05D007157 1.5e-48 196.8 165 62.4
BcaC06g32446 Brassica carinata HOM05D005461 ORTHO05D007157 2.0e-48 196.4 170 58.2
TPR.G12739 Trifolium pratense HOM05D005461 ORTHO05D007157 3.4e-48 195.7 153 62.7
Nitab4.5_0011048g0010 Nicotiana tabacum HOM05D005461 ORTHO05D007157 5.8e-48 194.9 179 57.5
Sabra15G0131600 Salix brachista HOM05D005461 ORTHO05D007157 5.8e-48 194.9 167 57.5
Sopen06g025970 Solanum pennellii HOM05D005461 ORTHO05D007157 5.8e-48 194.9 174 57.5
PGSC0003DMG400014230 Solanum tuberosum HOM05D005461 ORTHO05D007157 5.8e-48 194.9 178 57.3
BcaC06g32445 Brassica carinata HOM05D005461 ORTHO05D007157 1.0e-47 194.1 157 61.1
Atru.chr6.1950 Acer truncatum HOM05D005461 ORTHO05D007157 1.3e-47 193.7 174 58.0
C09p69500 Brassica napus HOM05D005461 ORTHO05D007157 1.3e-47 193.7 170 57.6
BolC9t59694H Brassica oleracea HOM05D005461 ORTHO05D007157 1.3e-47 193.7 170 57.6
Thhalv10012903m.g Eutrema salsugineum HOM05D005461 ORTHO05D007157 1.3e-47 193.7 161 60.2
Nitab4.5_0000976g0230 Nicotiana tabacum HOM05D005461 ORTHO05D007157 1.3e-47 193.7 179 57.5
CARHR205790 Cardamine hirsuta HOM05D005461 ORTHO05D007157 1.7e-47 193.4 161 59.6
ClCG00G000370 Citrullus lanatus HOM05D005461 ORTHO05D007157 1.7e-47 193.4 161 61.5
Hma1.2p1_1333F.1_g276230 Hydrangea macrophylla HOM05D005461 ORTHO05D007157 1.7e-47 193.4 136 72.8
Phvul.002G280000 Phaseolus vulgaris HOM05D005461 ORTHO05D007157 1.7e-47 193.4 153 64.1
CSS0041831 Camellia sinensis var. sinensis HOM05D005461 ORTHO05D007157 2.9e-47 192.6 136 71.3
FAN04G1626 Fragaria x ananassa HOM05D005461 ORTHO05D007157 2.9e-47 192.6 153 62.1
Sp6g35510 Schrenkiella parvula HOM05D005461 ORTHO05D007157 2.9e-47 192.6 168 57.7
Solyc03g118030.3 Solanum lycopersicum HOM05D005461 ORTHO05D007157 2.9e-47 192.6 178 56.7
Cc04_g05620 Coffea canephora HOM05D005461 ORTHO05D007157 3.8e-47 192.2 168 58.3
Sc04g0000020 Simmondsia chinensis HOM05D005461 ORTHO05D007157 3.8e-47 192.2 166 62.7
Sc04g0000060 Simmondsia chinensis HOM05D005461 ORTHO05D007157 3.8e-47 192.2 166 62.7
unitig_8.g3049 Utricularia gibba HOM05D005461 ORTHO05D007157 3.8e-47 192.2 174 56.3
FvH4_5g09971 Fragaria vesca HOM05D005461 ORTHO05D007157 4.9e-47 191.8 153 61.4
Sopen03g036930 Solanum pennellii HOM05D005461 ORTHO05D007157 4.9e-47 191.8 164 59.1
AT5G07360 Arabidopsis thaliana HOM05D005461 ORTHO05D007157 8.4e-47 191.0 161 60.2
AL6G17660 Arabidopsis lyrata HOM05D005461 ORTHO05D007157 1.1e-46 190.7 161 60.2
A10p29110 Brassica napus HOM05D005461 ORTHO05D007157 2.5e-46 189.5 170 56.5
BraA10t44960Z Brassica rapa HOM05D005461 ORTHO05D007157 2.5e-46 189.5 170 56.5
FAN18G0482 Fragaria x ananassa HOM05D005461 ORTHO05D007157 2.5e-46 189.5 153 61.4
Medtr8g095600 Medicago truncatula HOM05D005461 ORTHO05D007157 2.5e-46 189.5 173 55.5
AUR62036969 Chenopodium quinoa HOM05D005461 ORTHO05D007157 4.2e-46 188.7 177 55.4
FAN08G1284 Fragaria x ananassa HOM05D005461 ORTHO05D007157 4.2e-46 188.7 153 60.8
Glyma.05G199000 Glycine max HOM05D005461 ORTHO05D007157 4.2e-46 188.7 153 63.4
Zm00001eb197940 Zea mays HOM05D005461 ORTHO05D007157 4.2e-46 188.7 162 56.8
EL10Ac5g11262 Beta vulgaris HOM05D005461 ORTHO05D007157 5.5e-46 188.3 149 62.4
Ca_16815_v3 Cicer arietinum L. HOM05D005461 ORTHO05D007157 5.5e-46 188.3 167 56.9
Eucgr.K02184 Eucalyptus grandis HOM05D005461 ORTHO05D007157 7.1e-46 188.0 164 58.5
Lj4g0008483 Lotus japonicus HOM05D005461 ORTHO05D007157 7.1e-46 188.0 162 58.6
CAN.G1008.41 Capsicum annuum HOM05D005461 ORTHO05D007157 1.2e-45 187.2 178 54.5
SalBow7G2149 Salvia bowleyana HOM05D005461 ORTHO05D007157 1.6e-45 186.8 176 55.7
Aa31LG3G19010 Aethionema arabicum HOM05D005461 ORTHO05D007157 2.1e-45 186.4 169 57.4
MSTRG.22823 Avicennia marina HOM05D005461 ORTHO05D007157 2.1e-45 186.4 177 56.5
MBI07_g42016_MAGBIO Magnolia biondii HOM05D005461 ORTHO05D007157 2.1e-45 186.4 177 56.5
Peaxi162Scf00207g00211 Petunia axillaris HOM05D005461 ORTHO05D007157 2.1e-45 186.4 176 55.7
Ah.11g047030 Amaranthus hybridus HOM05D005461 ORTHO05D007157 3.5e-45 185.7 170 57.1
Carub.0006s0633 Capsella rubella HOM05D005461 ORTHO05D007157 4.6e-45 185.3 157 59.9
ECA246G4936 Erigeron canadensis HOM05D005461 ORTHO05D007157 7.9e-45 184.5 162 59.3
FvH4_5g09970 Fragaria vesca HOM05D005461 ORTHO05D007157 1.8e-44 183.3 153 60.8
Peaxi162Scf00314g00734 Petunia axillaris HOM05D005461 ORTHO05D007157 3.0e-44 182.6 148 63.5
Os11g0536800 Oryza sativa ssp. japonica HOM05D005461 ORTHO05D007157 3.9e-44 182.2 155 55.5
PSO017G0101 Papaver somniferum HOM05D005461 ORTHO05D007157 3.9e-44 182.2 177 53.1
PSO478G5039 Papaver somniferum HOM05D005461 ORTHO05D007157 5.1e-44 181.8 177 52.5
CAN.G1008.42 Capsicum annuum HOM05D005461 ORTHO05D007157 8.7e-44 181.0 170 55.9
Hund02520 Selenicereus undatus HOM05D005461 ORTHO05D007157 2.5e-43 179.5 174 55.7
Aqoxy5G02973 Aquilegia oxysepala HOM05D005461 ORTHO05D007157 3.3e-43 179.1 160 56.2
PGR102G2106 Punica granatum HOM05D005461 ORTHO05D007157 3.3e-43 179.1 169 53.8
AUR62032200 Chenopodium quinoa HOM05D005461 ORTHO05D007157 1.3e-42 177.2 177 53.7
ATR0582G258 Amborella trichopoda HOM05D005461 ORTHO05D007157 3.7e-42 175.6 162 56.2
TAR633G0377 Trochodendron aralioides HOM05D005461 ORTHO05D007157 3.7e-42 175.6 130 66.9
arahy.Tifrunner.gnm1.ann1.YX3IJQ Arachis hypogaea HOM05D005461 ORTHO05D007157 8.2e-42 174.5 175 55.4
HPP92_006437 Vanilla planifolia HOM05D005461 ORTHO05D007157 1.1e-41 174.1 166 53.6
VMungo0251G2939 Vigna mungo HOM05D005461 ORTHO05D007157 1.4e-41 173.7 172 54.7
Haze_07079 Corylus avellana HOM05D005461 ORTHO05D007157 2.4e-41 172.9 172 53.5
arahy.Tifrunner.gnm1.ann1.UDW2VH Arachis hypogaea HOM05D005461 ORTHO05D007157 9.0e-41 171.0 175 54.9
Nitab4.5_0002679g0030 Nicotiana tabacum HOM05D005461 ORTHO05D007157 2.9e-39 166.0 176 52.3
Hund02519 Selenicereus undatus HOM05D005461 ORTHO05D007157 8.4e-39 164.5 188 50.5
Lj9A488T69 Lonicera japonica HOM05D005461 ORTHO05D007157 7.1e-38 161.4 143 60.1
Nitab4.5_0005215g0030 Nicotiana tabacum HOM05D005461 ORTHO05D007157 2.7e-37 159.5 165 53.3
SMO367G0238 Selaginella moellendorffii HOM05D005461 ORTHO05D007157 1.2e-32 144.1 158 48.7
Pp3c4_17250 Physcomitrium patens HOM05D005461 ORTHO05D007157 1.5e-32 143.7 156 46.2
Nn3g16200 Nelumbo nucifera HOM05D005461 ORTHO05D007157 7.7e-32 141.4 158 48.7
Gorai.008G211800 Gossypium raimondii HOM05D005461 ORTHO05D007157 5.0e-31 138.7 164 51.2
Pp3c27_8370 Physcomitrium patens HOM05D005461 ORTHO05D007157 5.0e-31 138.7 164 42.1
AagrBONN_evm.TU.Sc2ySwM_228.2736 Anthoceros agrestis HOM05D005461 ORTHO05D007157 3.7e-26 122.5 141 44.0
GSVIVG01005676001 Vitis vinifera HOM05D005461 ORTHO05D007157 6.3e-18 95.1 61 75.4
MD14G1144500 Malus domestica HOM05D005461 ORTHO05D007157 1.9e-14 83.6 149 39.6
CSS0050110 Camellia sinensis var. sinensis HOM05D005461 ORTHO05D007157 2.0e-08 63.5 34 85.3
Psat7g040200 Pisum sativum HOM05D005461 ORTHO05D007157 1.9e-06 57.0 34 79.4
MD00G1076500 Malus domestica HOM05D005461 ORTHO05D007157 2.5e-06 56.6 36 72.2


User provided reference genes

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