Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_008461 Daucus carota HOM05D000247 ORTHO05D003114 7.5e-95 350.5 177 100.0
DCAR_006810 Daucus carota HOM05D000247 ORTHO05D003114 9.3e-21 104.4 177 44.6
Rhsim07G0103100 Rhododendron simsii HOM05D000247 ORTHO05D003114 9.6e-18 94.4 162 41.4
MD04G1080700 Malus domestica HOM05D000247 ORTHO05D003114 1.3e-17 94.0 163 42.3
Actinidia14454 Actinidia chinensis HOM05D000247 ORTHO05D003114 3.7e-17 92.4 90 58.9
HanXRQChr13g0393191 Helianthus annuus HOM05D000247 ORTHO05D003114 1.8e-16 90.1 157 42.7
Prupe.5G077400 Prunus persica HOM05D000247 ORTHO05D003114 3.1e-16 89.4 161 41.6
CAN.G1337.14 Capsicum annuum HOM05D000247 ORTHO05D003114 9.0e-16 87.8 165 40.0
Nitab4.5_0001816g0200 Nicotiana tabacum HOM05D000247 ORTHO05D003114 9.0e-16 87.8 164 41.5
Nn4g26345 Nelumbo nucifera HOM05D000247 ORTHO05D003114 1.2e-15 87.4 161 40.4
Gohir.A08G173000 Gossypium hirsutum HOM05D000247 ORTHO05D003114 2.0e-15 86.7 84 60.7
Gohir.D08G191800 Gossypium hirsutum HOM05D000247 ORTHO05D003114 2.0e-15 86.7 84 60.7
Gorai.004G201800 Gossypium raimondii HOM05D000247 ORTHO05D003114 2.0e-15 86.7 84 60.7
VMungo1215G1675 Vigna mungo HOM05D000247 ORTHO05D003114 2.0e-15 86.7 84 60.7
Actinidia02097 Actinidia chinensis HOM05D000247 ORTHO05D003114 3.4e-15 85.9 97 55.7
Nitab4.5_0001707g0120 Nicotiana tabacum HOM05D000247 ORTHO05D003114 3.4e-15 85.9 86 59.3
CSS0019006 Camellia sinensis var. sinensis HOM05D000247 ORTHO05D003114 4.5e-15 85.5 161 41.0
Oeu024054.1 Olea europaea HOM05D000247 ORTHO05D003114 5.8e-15 85.1 97 54.6
ATR0829G193 Amborella trichopoda HOM05D000247 ORTHO05D003114 7.6e-15 84.7 97 54.6
Thecc.03G259500 Theobroma cacao HOM05D000247 ORTHO05D003114 7.6e-15 84.7 84 58.3
AUR62027277 Chenopodium quinoa HOM05D000247 ORTHO05D003114 1.0e-14 84.3 175 40.6
Nitab4.5_0001707g0090 Nicotiana tabacum HOM05D000247 ORTHO05D003114 1.3e-14 84.0 99 53.5
AUR62007455 Chenopodium quinoa HOM05D000247 ORTHO05D003114 2.2e-14 83.2 175 40.0
COL.COLO4_23893 Corchorus olitorius HOM05D000247 ORTHO05D003114 2.2e-14 83.2 84 58.3
RcHm_v2.0_Chr7g0202041 Rosa chinensis HOM05D000247 ORTHO05D003114 2.2e-14 83.2 84 58.3
THA.LOC104812999 Tarenaya hassleriana HOM05D000247 ORTHO05D003114 2.2e-14 83.2 166 38.6
GSVIVG01006027001 Vitis vinifera HOM05D000247 ORTHO05D003114 2.2e-14 83.2 98 54.1
Sc01g0009250 Simmondsia chinensis HOM05D000247 ORTHO05D003114 2.9e-14 82.8 84 58.3
TWI81G0823 Tripterygium wilfordii HOM05D000247 ORTHO05D003114 3.8e-14 82.4 84 57.1
BcaC09g51137 Brassica carinata HOM05D000247 ORTHO05D003114 5.0e-14 82.0 166 38.6
C01p16940 Brassica napus HOM05D000247 ORTHO05D003114 5.0e-14 82.0 166 38.6
BolC1t01635H Brassica oleracea HOM05D000247 ORTHO05D003114 5.0e-14 82.0 166 38.6
FAN08G1933 Fragaria x ananassa HOM05D000247 ORTHO05D003114 5.0e-14 82.0 163 38.0
Sp7g20690 Schrenkiella parvula HOM05D000247 ORTHO05D003114 5.0e-14 82.0 167 38.3
Lsat_1_v5_gn_6_2241 Lactuca sativa HOM05D000247 ORTHO05D003114 6.5e-14 81.6 78 61.5
Lj2C210G3 Lonicera japonica HOM05D000247 ORTHO05D003114 6.5e-14 81.6 82 59.8
TWI60G1177 Tripterygium wilfordii HOM05D000247 ORTHO05D003114 8.4e-14 81.3 82 58.5
Aa31LG8G4750 Aethionema arabicum HOM05D000247 ORTHO05D003114 1.1e-13 80.9 109 45.0
Thhalv10025227m.g Eutrema salsugineum HOM05D000247 ORTHO05D003114 1.1e-13 80.9 82 57.3
Lsat_1_v5_gn_3_2560 Lactuca sativa HOM05D000247 ORTHO05D003114 1.1e-13 80.9 153 41.2
QL12p014248 Quercus lobata HOM05D000247 ORTHO05D003114 1.1e-13 80.9 105 49.5
Sabra03G0079100 Salix brachista HOM05D000247 ORTHO05D003114 1.1e-13 80.9 84 58.3
Carub.0003s1759 Capsella rubella HOM05D000247 ORTHO05D003114 1.4e-13 80.5 104 49.0
FAN04G1994 Fragaria x ananassa HOM05D000247 ORTHO05D003114 1.4e-13 80.5 163 37.4
FAN13G1145 Fragaria x ananassa HOM05D000247 ORTHO05D003114 1.4e-13 80.5 163 37.4
Nn1g01119 Nelumbo nucifera HOM05D000247 ORTHO05D003114 1.4e-13 80.5 156 39.1
CANSAT21G1126 Cannabis sativa HOM05D000247 ORTHO05D003114 1.9e-13 80.1 84 56.0
Potri.003G114000 Populus trichocarpa HOM05D000247 ORTHO05D003114 1.9e-13 80.1 97 53.6
Ciclev10020471m.g Citrus clementina HOM05D000247 ORTHO05D003114 2.5e-13 79.7 172 37.8
AL3G31040 Arabidopsis lyrata HOM05D000247 ORTHO05D003114 3.2e-13 79.3 119 44.5
A05p31920 Brassica napus HOM05D000247 ORTHO05D003114 3.2e-13 79.3 119 43.7
BraA05t22023Z Brassica rapa HOM05D000247 ORTHO05D003114 3.2e-13 79.3 119 43.7
Duzib068G0168 Durio zibethinus HOM05D000247 ORTHO05D003114 3.2e-13 79.3 97 50.5
Atru.chr9.1402 Acer truncatum HOM05D000247 ORTHO05D003114 4.2e-13 79.0 111 46.8
Eucgr.H00536 Eucalyptus grandis HOM05D000247 ORTHO05D003114 4.2e-13 79.0 107 44.9
Sp3g16000 Schrenkiella parvula HOM05D000247 ORTHO05D003114 4.2e-13 79.0 97 48.5
BcaC05g28741 Brassica carinata HOM05D000247 ORTHO05D003114 5.5e-13 78.6 119 43.7
A01p13910 Brassica napus HOM05D000247 ORTHO05D003114 5.5e-13 78.6 82 56.1
BolC5t33578H Brassica oleracea HOM05D000247 ORTHO05D003114 5.5e-13 78.6 119 43.7
BraA01t01337Z Brassica rapa HOM05D000247 ORTHO05D003114 5.5e-13 78.6 82 56.1
Haze_08595 Corylus avellana HOM05D000247 ORTHO05D003114 5.5e-13 78.6 104 48.1
CARHR093220 Cardamine hirsuta HOM05D000247 ORTHO05D003114 7.2e-13 78.2 92 54.3
vmacro17670 Vaccinium macrocarpon HOM05D000247 ORTHO05D003114 7.2e-13 78.2 84 53.6
BcaB06g25851 Brassica carinata HOM05D000247 ORTHO05D003114 9.3e-13 77.8 97 47.4
C05p48420 Brassica napus HOM05D000247 ORTHO05D003114 9.3e-13 77.8 119 43.7
AT3G17880 Arabidopsis thaliana HOM05D000247 ORTHO05D003114 1.2e-12 77.4 97 49.5
THA.LOC104820341 Tarenaya hassleriana HOM05D000247 ORTHO05D003114 1.2e-12 77.4 98 50.0
Thecc.03G059400 Theobroma cacao HOM05D000247 ORTHO05D003114 1.2e-12 77.4 97 49.5
MBI12_g14174_MAGBIO Magnolia biondii HOM05D000247 ORTHO05D003114 1.6e-12 77.0 93 51.6
Manes.02G034400 Manihot esculenta HOM05D000247 ORTHO05D003114 1.6e-12 77.0 97 49.5
Manes.06G004100 Manihot esculenta HOM05D000247 ORTHO05D003114 1.6e-12 77.0 84 53.6
QL10p031032 Quercus lobata HOM05D000247 ORTHO05D003114 1.6e-12 77.0 110 42.7
Eucgr.D02015 Eucalyptus grandis HOM05D000247 ORTHO05D003114 2.1e-12 76.6 84 56.0
Atru.chr9.1666 Acer truncatum HOM05D000247 ORTHO05D003114 2.7e-12 76.3 97 50.5
Migut.H01297 Erythranthe guttata HOM05D000247 ORTHO05D003114 2.7e-12 76.3 121 42.1
FAN18G2369 Fragaria x ananassa HOM05D000247 ORTHO05D003114 2.7e-12 76.3 180 34.4
Lj4g0002480 Lotus japonicus HOM05D000247 ORTHO05D003114 2.7e-12 76.3 120 42.5
PSO478G4749 Papaver somniferum HOM05D000247 ORTHO05D003114 2.7e-12 76.3 82 52.4
Lj5A160G55 Lonicera japonica HOM05D000247 ORTHO05D003114 3.5e-12 75.9 80 57.5
Peaxi162Scf00102g01235 Petunia axillaris HOM05D000247 ORTHO05D003114 4.6e-12 75.5 90 53.3
Glyma.08G055600 Glycine max HOM05D000247 ORTHO05D003114 6.1e-12 75.1 119 44.5
Phvul.002G331300 Phaseolus vulgaris HOM05D000247 ORTHO05D003114 1.0e-11 74.3 122 41.8
ATR0753G096 Amborella trichopoda HOM05D000247 ORTHO05D003114 1.3e-11 73.9 97 49.5
Lalb_Chr09g0330311 Lupinus albus HOM05D000247 ORTHO05D003114 1.3e-11 73.9 106 47.2
Medtr8g107460 Medicago truncatula HOM05D000247 ORTHO05D003114 1.3e-11 73.9 121 42.1
VMungo0251G2344 Vigna mungo HOM05D000247 ORTHO05D003114 1.3e-11 73.9 99 46.5
vmacro14053 Vaccinium macrocarpon HOM05D000247 ORTHO05D003114 1.8e-11 73.6 105 46.7
arahy.Tifrunner.gnm1.ann1.MKWV73 Arachis hypogaea HOM05D000247 ORTHO05D003114 2.3e-11 73.2 80 55.0
Dinv04600 Davidia involucrata HOM05D000247 ORTHO05D003114 2.3e-11 73.2 96 49.0
Potri.015G036000 Populus trichocarpa HOM05D000247 ORTHO05D003114 2.3e-11 73.2 109 45.0
SalBow5G4045 Salvia bowleyana HOM05D000247 ORTHO05D003114 2.3e-11 73.2 104 44.2
AL7G30920 Arabidopsis lyrata HOM05D000247 ORTHO05D003114 3.0e-11 72.8 166 36.7
Cc04_g06070 Coffea canephora HOM05D000247 ORTHO05D003114 3.0e-11 72.8 80 56.2
SGA_v2.0_scaffold90G27783 Striga asiatica HOM05D000247 ORTHO05D003114 3.0e-11 72.8 105 46.7
TAR375G0185 Trochodendron aralioides HOM05D000247 ORTHO05D003114 3.9e-11 72.4 120 43.3
AagrBONN_evm.TU.Sc2ySwM_344.2062 Anthoceros agrestis HOM05D000247 ORTHO05D003114 5.1e-11 72.0 93 47.3
Hund14625 Selenicereus undatus HOM05D000247 ORTHO05D003114 5.1e-11 72.0 83 53.0
TPR.G1443 Trifolium pratense HOM05D000247 ORTHO05D003114 5.1e-11 72.0 80 51.2
MD14G1238000 Malus domestica HOM05D000247 ORTHO05D003114 6.7e-11 71.6 83 50.6
Solyc03g118550.3 Solanum lycopersicum HOM05D000247 ORTHO05D003114 6.7e-11 71.6 82 52.4
AT4G22670 Arabidopsis thaliana HOM05D000247 ORTHO05D003114 8.7e-11 71.2 166 36.1
Prupe.2G018600 Prunus persica HOM05D000247 ORTHO05D003114 1.1e-10 70.9 84 50.0
Prupe.2G018700 Prunus persica HOM05D000247 ORTHO05D003114 1.1e-10 70.9 84 50.0
Prupe.5G235200 Prunus persica HOM05D000247 ORTHO05D003114 1.1e-10 70.9 99 46.5
GSVIVG01008455001 Vitis vinifera HOM05D000247 ORTHO05D003114 1.1e-10 70.9 97 48.5
Actinidia09071 Actinidia chinensis HOM05D000247 ORTHO05D003114 1.5e-10 70.5 115 41.7
Psat7g001040 Pisum sativum HOM05D000247 ORTHO05D003114 1.5e-10 70.5 106 43.4
Migut.E00882 Erythranthe guttata HOM05D000247 ORTHO05D003114 1.9e-10 70.1 105 45.7
unitig_26.g8809 Utricularia gibba HOM05D000247 ORTHO05D003114 1.9e-10 70.1 104 44.2
MSTRG.11523 Avicennia marina HOM05D000247 ORTHO05D003114 2.5e-10 69.7 107 43.0
Migut.O00229 Erythranthe guttata HOM05D000247 ORTHO05D003114 2.5e-10 69.7 120 41.7
Potri.012G045000 Populus trichocarpa HOM05D000247 ORTHO05D003114 2.5e-10 69.7 120 41.7
SEGI_23698 Sequoiadendron giganteum HOM05D000247 ORTHO05D003114 2.5e-10 69.7 119 41.2
Sabra15G0029600 Salix brachista HOM05D000247 ORTHO05D003114 3.3e-10 69.3 97 47.4
DCAR_003538 Daucus carota HOM05D000247 ORTHO05D003114 4.3e-10 68.9 92 47.8
Migut.E01692 Erythranthe guttata HOM05D000247 ORTHO05D003114 4.3e-10 68.9 105 44.8
FAN13G1410 Fragaria x ananassa HOM05D000247 ORTHO05D003114 4.3e-10 68.9 84 47.6
HanXRQChr13g0400971 Helianthus annuus HOM05D000247 ORTHO05D003114 4.3e-10 68.9 97 46.4
Mapoly0014s0097 Marchantia polymorpha HOM05D000247 ORTHO05D003114 4.3e-10 68.9 84 48.8
Carub.0007s1865 Capsella rubella HOM05D000247 ORTHO05D003114 7.4e-10 68.2 163 36.2
Lj4g0008092 Lotus japonicus HOM05D000247 ORTHO05D003114 7.4e-10 68.2 128 39.1
FAN04G0502 Fragaria x ananassa HOM05D000247 ORTHO05D003114 9.7e-10 67.8 97 44.3
Peaxi162Scf00314g00329 Petunia axillaris HOM05D000247 ORTHO05D003114 9.7e-10 67.8 78 55.1
Aa31LG6G4630 Aethionema arabicum HOM05D000247 ORTHO05D003114 1.3e-09 67.4 174 33.9
Lsat_1_v5_gn_6_23281 Lactuca sativa HOM05D000247 ORTHO05D003114 1.3e-09 67.4 78 55.1
Gohir.D11G020000 Gossypium hirsutum HOM05D000247 ORTHO05D003114 2.2e-09 66.6 128 39.8
SMO145G0198 Selaginella moellendorffii HOM05D000247 ORTHO05D003114 2.2e-09 66.6 97 42.3
Dinv39094 Davidia involucrata HOM05D000528 ORTHO05D001569 3.7e-09 65.9 169 34.9
FAN08G3662 Fragaria x ananassa HOM05D000247 ORTHO05D003114 3.7e-09 65.9 84 46.4
Dinv21584 Davidia involucrata HOM05D000247 ORTHO05D003114 6.3e-09 65.1 195 31.3
PSO478G2803 Papaver somniferum HOM05D000247 ORTHO05D003114 6.3e-09 65.1 92 46.7
PSO782G2490 Papaver somniferum HOM05D000247 ORTHO05D003114 6.3e-09 65.1 92 46.7
Sabra01G0091800 Salix brachista HOM05D000247 ORTHO05D003114 6.3e-09 65.1 92 45.7
Ca_20234_v3 Cicer arietinum L. HOM05D000247 ORTHO05D003114 8.2e-09 64.7 113 40.7
FvH4_5g17540 Fragaria vesca HOM05D000247 ORTHO05D003114 8.2e-09 64.7 97 43.3
FAN18G1699 Fragaria x ananassa HOM05D000247 ORTHO05D003114 8.2e-09 64.7 97 43.3
Pp3c20_8620 Physcomitrium patens HOM05D000247 ORTHO05D003114 8.2e-09 64.7 110 40.0
MSTRG.11524 Avicennia marina HOM05D000247 ORTHO05D003114 1.1e-08 64.3 106 41.5
EL10Ac5g12986 Beta vulgaris HOM05D000247 ORTHO05D003114 1.1e-08 64.3 35 82.9
Duzib205G0060 Durio zibethinus HOM05D000247 ORTHO05D003114 1.8e-08 63.5 92 45.7
Duzib205G1892 Durio zibethinus HOM05D000247 ORTHO05D003114 1.8e-08 63.5 92 45.7
Gorai.007G021300 Gossypium raimondii HOM05D000247 ORTHO05D003114 3.1e-08 62.8 128 39.1
Oeu040226.1 Olea europaea HOM05D000247 ORTHO05D003114 3.1e-08 62.8 181 34.3
SalBow5G0494 Salvia bowleyana HOM05D000247 ORTHO05D003114 3.1e-08 62.8 107 40.2
Gohir.A11G020300 Gossypium hirsutum HOM05D000247 ORTHO05D003114 6.9e-08 61.6 128 39.1
MD06G1228800 Malus domestica HOM05D000247 ORTHO05D003114 9.0e-08 61.2 136 35.3
ECA233G0840 Erigeron canadensis HOM05D000247 ORTHO05D003114 1.2e-07 60.8 86 46.5
CARHR229600 Cardamine hirsuta HOM05D000247 ORTHO05D003114 2.0e-07 60.1 174 32.8
Lalb_Chr05g0225481 Lupinus albus HOM05D000247 ORTHO05D003114 2.0e-07 60.1 92 43.5
Lj8C256G5 Lonicera japonica HOM05D000247 ORTHO05D003114 2.6e-07 59.7 80 51.2
Phvul.003G214200 Phaseolus vulgaris HOM05D000247 ORTHO05D003114 2.6e-07 59.7 92 43.5
PGR031G1880 Punica granatum HOM05D000247 ORTHO05D003114 2.6e-07 59.7 105 41.0
Psat4g068400 Pisum sativum HOM05D000247 ORTHO05D003114 5.9e-07 58.5 113 37.2
arahy.Tifrunner.gnm1.ann1.Y4ZXGE Arachis hypogaea HOM05D000247 ORTHO05D003114 7.7e-07 58.2 90 43.3
arahy.Tifrunner.gnm1.ann1.Z2YVAL Arachis hypogaea HOM05D000247 ORTHO05D003114 7.7e-07 58.2 90 43.3
Glyma.05G051600 Glycine max HOM05D000247 ORTHO05D003114 7.7e-07 58.2 92 43.5
Ah.12g056220 Amaranthus hybridus HOM05D000247 ORTHO05D003114 1.0e-06 57.8 90 43.3
TAR629G1732 Trochodendron aralioides HOM05D000247 ORTHO05D003114 1.0e-06 57.8 101 41.6
Oeu025919.1 Olea europaea HOM05D000247 ORTHO05D003114 1.7e-06 57.0 84 44.0
Aqoxy7G00684 Aquilegia oxysepala HOM05D000247 ORTHO05D003114 2.2e-06 56.6 90 43.3
RcHm_v2.0_Chr7g0178111 Rosa chinensis HOM05D000247 ORTHO05D003114 2.9e-06 56.2 84 41.7
Medtr4g102390 Medicago truncatula HOM05D000247 ORTHO05D003114 3.8e-06 55.8 113 37.2
unitig_26.g9683 Utricularia gibba HOM05D000247 ORTHO05D003114 5.0e-06 55.5 101 38.6
FvH4_5g00470 Fragaria vesca HOM05D000247 ORTHO05D003114 8.5e-06 54.7 168 30.4
Potri.001G118900 Populus trichocarpa HOM05D000247 ORTHO05D003114 8.5e-06 54.7 101 40.6
SGA_v2.0_scaffold196G40945 Striga asiatica HOM05D000247 ORTHO05D003114 8.5e-06 54.7 90 42.2


User provided reference genes

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