Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_008439 Daucus carota HOM05D005189 ORTHO05D006093 1.5e-277 958.7 452 100.0
DCAR_022674 Daucus carota HOM05D005189 ORTHO05D006093 4.9e-183 644.8 484 69.6
DCAR_005781 Daucus carota HOM05D005189 ORTHO05D006093 1.5e-120 437.2 439 53.1
DCAR_006919 Daucus carota HOM05D005189 ORTHO05D006093 4.5e-120 435.6 435 53.3
Dinv10045 Davidia involucrata HOM05D003197 ORTHO05D006093 2.7e-96 356.7 412 47.1
Dinv33081 Davidia involucrata HOM05D005189 ORTHO05D006093 1.7e-95 354.0 493 43.0
Actinidia25825 Actinidia chinensis HOM05D005189 ORTHO05D006093 7.2e-94 348.6 485 41.4
TAR365G0047 Trochodendron aralioides HOM05D005189 ORTHO05D006093 8.0e-93 345.1 447 44.3
TWI23G0603 Tripterygium wilfordii HOM05D005189 ORTHO05D006093 4.4e-91 339.3 441 42.0
CSS0031632 Camellia sinensis var. sinensis HOM05D005189 ORTHO05D006093 2.2e-90 337.0 447 43.4
ClCG03G014110 Citrullus lanatus HOM05D005189 ORTHO05D006093 2.8e-90 336.7 442 42.8
MELO3C015632.2 Cucumis melo HOM05D005189 ORTHO05D006093 2.8e-90 336.7 468 40.8
CSS0046497 Camellia sinensis var. sinensis HOM05D005189 ORTHO05D006093 1.8e-89 334.0 410 45.1
MBI19_g05150_MAGBIO Magnolia biondii HOM05D005189 ORTHO05D006093 5.4e-89 332.4 491 42.0
Sopen08g025020 Solanum pennellii HOM05D005189 ORTHO05D006093 5.4e-89 332.4 443 42.0
GSVIVG01028059001 Vitis vinifera HOM05D005189 ORTHO05D006093 5.4e-89 332.4 492 40.2
CsaV3_1G042140 Cucumis sativus L. HOM05D005189 ORTHO05D006093 9.2e-89 331.6 449 41.0
CiPaw.01G112900 Carya illinoinensis HOM05D005189 ORTHO05D006093 2.0e-88 330.5 421 43.9
Lalb_Chr01g0008881 Lupinus albus HOM05D005189 ORTHO05D006093 2.7e-88 330.1 464 39.9
Nitab4.5_0000809g0080 Nicotiana tabacum HOM05D005189 ORTHO05D006093 2.7e-88 330.1 440 41.8
Sed0013075 Sechium edule HOM05D005189 ORTHO05D006093 3.5e-88 329.7 458 41.7
Gohir.A11G162200 Gossypium hirsutum HOM05D005189 ORTHO05D006093 1.7e-87 327.4 448 41.5
PGSC0003DMG400014794 Solanum tuberosum HOM05D005189 ORTHO05D006093 2.3e-87 327.0 444 41.7
CAN.G1987.2 Capsicum annuum HOM05D005189 ORTHO05D006093 2.9e-87 326.6 444 41.9
Eucgr.D00103 Eucalyptus grandis HOM05D005189 ORTHO05D006093 2.9e-87 326.6 435 43.0
PGR044G0984 Punica granatum HOM05D005189 ORTHO05D006093 2.9e-87 326.6 446 41.7
PGR047G0002 Punica granatum HOM05D005189 ORTHO05D006093 2.9e-87 326.6 446 41.7
Duzib128G0399 Durio zibethinus HOM05D005189 ORTHO05D006093 3.8e-87 326.2 447 41.6
Cpa.g.sc151.36 Carica papaya HOM05D005189 ORTHO05D006093 6.6e-87 325.5 423 43.7
AUR62024701 Chenopodium quinoa HOM05D005189 ORTHO05D006093 1.1e-86 324.7 442 41.9
Ciclev10020359m.g Citrus clementina HOM05D005189 ORTHO05D006093 1.5e-86 324.3 441 41.7
Sabra02G0157700 Salix brachista HOM05D005189 ORTHO05D006093 1.9e-86 323.9 467 40.0
THA.LOC104801289 Tarenaya hassleriana HOM05D005189 ORTHO05D006093 1.9e-86 323.9 442 41.6
Atru.chr5.1082 Acer truncatum HOM05D005189 ORTHO05D006093 2.5e-86 323.6 444 41.9
Gohir.D11G168500 Gossypium hirsutum HOM05D005189 ORTHO05D006093 2.5e-86 323.6 448 41.1
Gorai.007G180000 Gossypium raimondii HOM05D005189 ORTHO05D006093 2.5e-86 323.6 448 41.3
Nn8g40249 Nelumbo nucifera HOM05D005189 ORTHO05D006093 4.3e-86 322.8 441 42.2
Phvul.011G074000 Phaseolus vulgaris HOM05D005189 ORTHO05D006093 4.3e-86 322.8 443 43.1
Os03g0300200 Oryza sativa ssp. japonica HOM05D005189 ORTHO05D006093 5.6e-86 322.4 445 41.8
Cfa010639 Carpinus fangiana HOM05D005189 ORTHO05D006093 7.3e-86 322.0 442 42.8
QL06p006883 Quercus lobata HOM05D005189 ORTHO05D006093 7.3e-86 322.0 442 41.0
Peaxi162Scf00170g00624 Petunia axillaris HOM05D005189 ORTHO05D006093 1.2e-85 321.2 409 42.5
EL10Ac2g03409 Beta vulgaris HOM05D005189 ORTHO05D006093 1.6e-85 320.9 470 40.4
Thecc.05G192400 Theobroma cacao HOM05D005189 ORTHO05D006093 2.1e-85 320.5 447 41.4
Glyma.09G081700 Glycine max HOM05D005189 ORTHO05D006093 3.6e-85 319.7 478 39.1
FAN21G1757 Fragaria x ananassa HOM05D005189 ORTHO05D006093 1.4e-84 317.8 420 42.4
VMungo0464G0625 Vigna mungo HOM05D005189 ORTHO05D006093 1.8e-84 317.4 476 40.1
Aqoxy2G02861 Aquilegia oxysepala HOM05D005189 ORTHO05D006093 2.3e-84 317.0 449 41.2
Oeu008336.1 Olea europaea HOM05D005189 ORTHO05D006093 3.1e-84 316.6 479 40.3
Potri.002G201200 Populus trichocarpa HOM05D005189 ORTHO05D006093 4.0e-84 316.2 438 40.9
FvH4_3g14570 Fragaria vesca HOM05D005189 ORTHO05D006093 6.8e-84 315.5 420 42.6
CDE02G1252 Ceratophyllum demersum HOM05D005189 ORTHO05D006093 2.0e-83 313.9 426 41.5
AUR62011856 Chenopodium quinoa HOM05D005189 ORTHO05D006093 2.0e-83 313.9 447 41.4
RcHm_v2.0_Chr5g0024021 Rosa chinensis HOM05D005189 ORTHO05D006093 2.6e-83 313.5 442 41.9
FAN16G0469 Fragaria x ananassa HOM05D005189 ORTHO05D006093 3.4e-83 313.2 420 42.4
arahy.Tifrunner.gnm1.ann1.3WZ8U6 Arachis hypogaea HOM05D005189 ORTHO05D006093 5.8e-83 312.4 441 41.3
Prupe.4G131100 Prunus persica HOM05D005189 ORTHO05D006093 5.8e-83 312.4 443 42.9
Ca_09036_v3 Cicer arietinum L. HOM05D006431 ORTHO05D007918 7.5e-83 312.0 465 39.4
arahy.Tifrunner.gnm1.ann1.U1QXXC Arachis hypogaea HOM05D005189 ORTHO05D006093 9.8e-83 311.6 441 41.0
MD10G1211200 Malus domestica HOM05D005189 ORTHO05D006093 1.7e-82 310.8 446 41.9
Manes.03G058600 Manihot esculenta HOM05D005189 ORTHO05D006093 2.2e-82 310.5 440 40.2
AL6G50910 Arabidopsis lyrata HOM05D005189 ORTHO05D006093 2.9e-82 310.1 446 39.2
Cc01_g21150 Coffea canephora HOM05D005189 ORTHO05D006093 2.9e-82 310.1 451 41.5
Zm00001eb396540 Zea mays HOM05D005189 ORTHO05D006093 2.9e-82 310.1 467 39.8
Thhalv10028689m.g Eutrema salsugineum HOM05D005189 ORTHO05D006093 4.9e-82 309.3 443 39.3
AT4G02220 Arabidopsis thaliana HOM05D005189 ORTHO05D006093 6.4e-82 308.9 445 39.3
MD05G1235200 Malus domestica HOM05D005189 ORTHO05D006093 6.4e-82 308.9 443 42.4
arahy.Tifrunner.gnm1.ann1.4RF6J7 Arachis hypogaea HOM05D005189 ORTHO05D006093 1.1e-81 308.1 474 39.9
Manes.05G000401 Manihot esculenta HOM05D005189 ORTHO05D006093 1.1e-81 308.1 438 40.2
PSO765G0055 Papaver somniferum HOM05D005189 ORTHO05D006093 1.1e-81 308.1 441 40.1
Zm00001eb013970 Zea mays HOM05D005189 ORTHO05D006093 1.4e-81 307.8 445 40.4
ECA236G2822 Erigeron canadensis HOM05D000141 ORTHO05D000780 1.9e-81 307.4 439 41.5
Psat3g030640 Pisum sativum HOM05D005189 ORTHO05D006093 1.9e-81 307.4 482 38.8
Migut.D00121 Erythranthe guttata HOM05D005189 ORTHO05D006093 2.4e-81 307.0 469 39.9
Sc05g0003490 Simmondsia chinensis HOM05D005189 ORTHO05D006093 4.1e-81 306.2 462 40.3
arahy.Tifrunner.gnm1.ann1.ZR0QLK Arachis hypogaea HOM05D005189 ORTHO05D006093 5.4e-81 305.8 455 40.9
Nitab4.5_0000529g0190 Nicotiana tabacum HOM05D005189 ORTHO05D006093 5.4e-81 305.8 473 38.1
Carub.0006s3494 Capsella rubella HOM05D005189 ORTHO05D006093 4.6e-80 302.8 447 38.5
Lj6g0027180 Lotus japonicus HOM05D005189 ORTHO05D006093 4.6e-80 302.8 424 40.1
MSTRG.13027 Avicennia marina HOM05D005189 ORTHO05D006093 6.0e-80 302.4 470 39.4
CARHR250440 Cardamine hirsuta HOM05D005189 ORTHO05D006093 6.0e-80 302.4 443 39.3
HPP92_013737 Vanilla planifolia HOM05D005189 ORTHO05D006093 7.8e-80 302.0 423 40.4
BcaC04g24048 Brassica carinata HOM05D005189 ORTHO05D006093 1.7e-79 300.8 442 39.8
Sp6g02120 Schrenkiella parvula HOM05D005189 ORTHO05D006093 1.7e-79 300.8 446 38.3
PSO782G1813 Papaver somniferum HOM05D005189 ORTHO05D006093 3.9e-79 299.7 440 39.8
Medtr7g105630 Medicago truncatula HOM05D005189 ORTHO05D006093 5.0e-79 299.3 440 38.4
TPR.G23365 Trifolium pratense HOM05D005189 ORTHO05D006093 5.0e-79 299.3 448 39.3
BcaB01g02068 Brassica carinata HOM05D005189 ORTHO05D006093 1.1e-78 298.1 420 39.5
unitig_22.g5230 Utricularia gibba HOM05D005189 ORTHO05D006093 5.6e-78 295.8 448 40.6
arahy.Tifrunner.gnm1.ann1.ALS4S9 Arachis hypogaea HOM05D005189 ORTHO05D006093 9.5e-78 295.0 458 40.4
Aa31LG5G1890 Aethionema arabicum HOM05D005189 ORTHO05D006093 1.6e-77 294.3 440 38.9
Lj1g0024820 Lotus japonicus HOM05D005189 ORTHO05D006093 2.8e-77 293.5 423 40.9
Eucgr.D00338 Eucalyptus grandis HOM05D005189 ORTHO05D006093 1.8e-76 290.8 435 39.8
SalBow6G1077 Salvia bowleyana HOM05D005189 ORTHO05D006093 2.3e-76 290.4 451 38.8
Lsat_1_v5_gn_8_164980 Lactuca sativa HOM05D005189 ORTHO05D006093 5.2e-76 289.3 464 38.1
ATR0665G541 Amborella trichopoda HOM05D005189 ORTHO05D006093 1.5e-75 287.7 451 38.1
HanXRQChr04g0111211 Helianthus annuus HOM05D005189 ORTHO05D006093 1.5e-75 287.7 470 37.9
HanXRQChr04g0114701 Helianthus annuus HOM05D005189 ORTHO05D006093 2.9e-74 283.5 448 40.4
Solyc08g076440.4 Solanum lycopersicum HOM05D005189 ORTHO05D006093 4.9e-74 282.7 465 38.5
Rhsim13G0007900 Rhododendron simsii HOM05D005189 ORTHO05D006093 3.2e-73 280.0 442 40.3
SGA_v2.0_scaffold334G49031 Striga asiatica HOM05D000141 ORTHO05D000780 6.0e-72 275.8 439 39.0
Glyma.12G070400 Glycine max HOM05D005189 ORTHO05D006093 7.8e-72 275.4 322 46.3
C09p01760 Brassica napus HOM05D005189 ORTHO05D006093 1.3e-71 274.6 321 46.1
A09p01690 Brassica napus HOM05D005189 ORTHO05D006093 3.0e-71 273.5 320 45.9
arahy.Tifrunner.gnm1.ann1.5FY99X Arachis hypogaea HOM05D005189 ORTHO05D006093 1.5e-67 261.2 450 37.8
EL10Ac9g21129 Beta vulgaris HOM05D005189 ORTHO05D006093 1.1e-65 255.0 450 35.8
FAN11G2688 Fragaria x ananassa HOM05D005189 ORTHO05D006093 6.0e-64 249.2 448 35.7
Oeu021746.1 Olea europaea HOM05D005189 ORTHO05D006093 3.9e-63 246.5 463 35.9
Pp3c25_650 Physcomitrium patens HOM05D005189 ORTHO05D006093 1.9e-62 244.2 482 32.0
Pp3c22_7380 Physcomitrium patens HOM05D005189 ORTHO05D006093 2.5e-62 243.8 494 34.0
Rhsim01G0287800 Rhododendron simsii HOM05D005189 ORTHO05D006093 4.3e-62 243.0 464 36.2
SEGI_10631 Sequoiadendron giganteum HOM05D005189 ORTHO05D006093 4.3e-62 243.0 453 34.4
SMO118G0558 Selaginella moellendorffii HOM05D005189 ORTHO05D006093 1.2e-59 235.0 443 34.3
Mapoly0037s0138 Marchantia polymorpha HOM05D005189 ORTHO05D006093 1.5e-59 234.6 458 33.0
Actinidia21022 Actinidia chinensis HOM05D005189 ORTHO05D006093 4.2e-57 226.5 339 39.5
AagrBONN_evm.TU.Sc2ySwM_117.3848 Anthoceros agrestis HOM05D005189 ORTHO05D006093 8.7e-55 218.8 331 38.7
Lj5C676G0 Lonicera japonica HOM05D005189 ORTHO05D006093 9.6e-54 215.3 429 34.5
BolC9t53111H Brassica oleracea HOM05D005189 ORTHO05D006093 2.1e-53 214.2 279 44.4
BraA09t35824Z Brassica rapa HOM05D005189 ORTHO05D006093 2.4e-52 210.7 279 44.1
CAN.G726.22 Capsicum annuum HOM05D005189 ORTHO05D006093 1.9e-49 201.1 347 37.2
CBR_g22284 Chara braunii HOM05D005189 ORTHO05D006093 5.4e-49 199.5 468 29.5
FAN25G2462 Fragaria x ananassa HOM05D005189 ORTHO05D006093 6.0e-40 169.5 208 45.2
TPR.G32201 Trifolium pratense HOM05D005189 ORTHO05D006093 3.9e-39 166.8 139 56.1
Haze_03587 Corylus avellana HOM05D005189 ORTHO05D006093 1.7e-34 151.4 98 66.3
COL.COLO4_33288 Corchorus olitorius HOM05D005189 ORTHO05D006093 3.5e-32 143.7 97 64.9
Lj1A21G66 Lonicera japonica HOM05D005189 ORTHO05D006093 1.0e-31 142.1 333 30.9
Haze_03588 Corylus avellana HOM05D005189 ORTHO05D006093 5.1e-31 139.8 128 57.8
Zm00001eb306860 Zea mays HOM05D001670 ORTHO05D006093 1.3e-29 135.2 177 39.0
Aqoxy22s002 Aquilegia oxysepala HOM05D005189 ORTHO05D006093 1.6e-29 134.8 221 34.8
Haze_03584 Corylus avellana HOM05D002736 ORTHO05D003882 1.4e-28 131.7 87 65.5
Cre03.g149500 Chlamydomonas reinhardtii HOM05D005189 ORTHO05D006093 4.5e-27 126.7 484 25.6
Lj1A21T72 Lonicera japonica HOM05D005189 ORTHO05D006093 1.0e-26 125.6 78 69.2
Thecc.05G196300 Theobroma cacao HOM05D005189 ORTHO05D006093 2.9e-26 124.0 168 38.7
MCO15G205 Micromonas commoda HOM05D005189 ORTHO05D006093 4.2e-25 120.2 436 27.1
TPR.G32202 Trifolium pratense HOM05D005189 ORTHO05D006093 9.3e-25 119.0 190 34.7
Os01g0578200 Oryza sativa ssp. japonica HOM05D005189 ORTHO05D006093 1.0e-23 115.5 93 51.6
SMO143G0306 Selaginella moellendorffii HOM05D005189 ORTHO05D006093 9.0e-20 102.4 92 48.9
Zm00001eb092500 Zea mays HOM05D005189 ORTHO05D006093 2.6e-19 100.9 116 42.2
Zm00001eb129840 Zea mays HOM05D001670 ORTHO05D006093 1.7e-18 98.2 148 37.2
HanXRQChr04g0111201 Helianthus annuus HOM05D005189 ORTHO05D006093 3.2e-17 94.0 90 55.6
Zm00001eb265340 Zea mays HOM05D005189 ORTHO05D006093 3.2e-17 94.0 131 40.5
Zm00001eb312720 Zea mays HOM05D005189 ORTHO05D006093 2.1e-16 91.3 83 54.2
SMO143G0318 Selaginella moellendorffii HOM05D005189 ORTHO05D006093 1.1e-12 79.0 111 41.4
TAR633G0010 Trochodendron aralioides HOM05D000322 ORTHO05D000186 1.4e-12 78.6 53 64.2
Glyma.11G155468 Glycine max HOM05D005189 ORTHO05D006093 2.9e-10 70.9 88 40.9
PRCOL_00005294 Prasinoderma coloniale HOM05D005189 ORTHO05D006093 1.1e-09 68.9 100 39.0
Mapoly0014s0114 Marchantia polymorpha HOM05D006130 ORTHO05D007491 1.5e-06 58.5 71 36.6
Cc07_g16320 Coffea canephora HOM05D006130 ORTHO05D007491 2.0e-06 58.2 67 41.8
CARHR278840 Cardamine hirsuta HOM05D006130 ORTHO05D007491 3.3e-06 57.4 92 37.0
Pp3c16_16240 Physcomitrium patens HOM05D006130 ORTHO05D007491 9.7e-06 55.8 86 34.9


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