Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_008381 Daucus carota HOM05D002065 ORTHO05D002050 3.1e-136 488.4 241 100.0
DCAR_008384 Daucus carota HOM05D002065 ORTHO05D002050 7.8e-87 324.3 225 75.1
DCAR_008386 Daucus carota HOM05D002065 ORTHO05D002050 1.9e-85 319.7 236 72.5
DCAR_008380 Daucus carota HOM05D002065 ORTHO05D002050 2.0e-58 229.9 233 51.1
DCAR_008383 Daucus carota HOM05D002065 ORTHO05D002050 1.1e-56 224.2 199 58.8
DCAR_020516 Daucus carota HOM05D002065 ORTHO05D002050 3.1e-51 206.1 231 46.8
DCAR_019578 Daucus carota HOM05D002065 ORTHO05D035029 7.4e-37 158.3 226 39.4
DCAR_019582 Daucus carota HOM05D002065 ORTHO05D002050 7.2e-32 141.7 185 44.3
DCAR_019579 Daucus carota HOM05D002065 ORTHO05D002050 5.3e-27 125.6 208 40.4
DCAR_008382 Daucus carota HOM05D002065 ORTHO05D175199 8.2e-20 101.7 115 52.2
DCAR_008387 Daucus carota HOM05D059228 ORTHO05D002050 3.5e-18 96.3 225 32.9
MSTRG.14416 Avicennia marina HOM05D002065 ORTHO05D002050 1.3e-17 94.4 179 35.2
Lj8P166T75 Lonicera japonica HOM05D002065 ORTHO05D002050 1.3e-17 94.4 166 35.5
DCAR_022527 Daucus carota HOM05D002065 ORTHO05D002050 7.2e-16 88.6 215 35.8
RhsimUnG0253100 Rhododendron simsii HOM05D002065 ORTHO05D002050 4.7e-15 85.9 182 32.4
Cc05_g13270 Coffea canephora HOM05D002065 ORTHO05D002050 8.0e-15 85.1 172 34.9
DCAR_022525 Daucus carota HOM05D002065 ORTHO05D002050 1.4e-14 84.3 194 31.4
Hma1.2p1_1869F.1_g306050 Hydrangea macrophylla HOM05D002065 ORTHO05D002050 2.3e-14 83.6 165 35.8
Nitab4.5_0000092g0090 Nicotiana tabacum HOM05D002065 ORTHO05D002050 2.3e-14 83.6 134 35.8
Migut.M01810 Erythranthe guttata HOM05D002065 ORTHO05D002050 3.0e-14 83.2 207 30.9
Oeu007632.1 Olea europaea HOM05D002065 ORTHO05D002050 3.0e-14 83.2 171 32.7
Actinidia35318 Actinidia chinensis HOM05D000018 ORTHO05D001766 6.7e-14 82.0 182 35.7
Lsat_1_v5_gn_3_120800 Lactuca sativa HOM05D002065 ORTHO05D002050 6.7e-14 82.0 158 34.2
SGA_v2.0_scaffold27G11640 Striga asiatica HOM05D002065 ORTHO05D002050 6.7e-14 82.0 182 33.0
Oeu007631.2 Olea europaea HOM05D002065 ORTHO05D002050 8.8e-14 81.6 167 32.9
Haze_09617 Corylus avellana HOM05D002065 ORTHO05D002050 1.2e-13 81.3 167 36.5
Nn1g03652 Nelumbo nucifera HOM05D002065 ORTHO05D002050 1.5e-13 80.9 183 32.8
Hma1.2p1_1869F.1_g306060 Hydrangea macrophylla HOM05D002065 ORTHO05D002050 2.0e-13 80.5 150 36.0
DCAR_020515 Daucus carota HOM05D002065 ORTHO05D002050 2.6e-13 80.1 172 37.8
Cfa020411 Carpinus fangiana HOM05D002065 ORTHO05D002050 5.7e-13 79.0 168 35.7
Hma1.2p1_1564F.1_g290830 Hydrangea macrophylla HOM05D002065 ORTHO05D002050 5.7e-13 79.0 166 35.5
Sopen12g001210 Solanum pennellii HOM05D002065 ORTHO05D002050 5.7e-13 79.0 161 32.9
Lsat_1_v5_gn_5_5781 Lactuca sativa HOM05D002065 ORTHO05D002050 7.5e-13 78.6 190 32.6
Cpa.g.c26548.3 Carica papaya HOM05D002065 ORTHO05D002050 1.3e-12 77.8 186 34.4
Cfa020412 Carpinus fangiana HOM05D002065 ORTHO05D002050 1.3e-12 77.8 166 34.9
TAR629G2752 Trochodendron aralioides HOM05D002065 ORTHO05D002050 1.3e-12 77.8 187 31.0
Dinv40711 Davidia involucrata HOM05D002065 ORTHO05D001766 1.7e-12 77.4 218 32.6
QL08p013247 Quercus lobata HOM05D002065 ORTHO05D002050 1.7e-12 77.4 215 32.1
Solyc12g005230.3 Solanum lycopersicum HOM05D001540 ORTHO05D001520 1.7e-12 77.4 168 32.1
Haze_09616 Corylus avellana HOM05D002065 ORTHO05D002050 3.7e-12 76.3 166 33.7
Oeu042915.1 Olea europaea HOM05D002065 ORTHO05D002050 1.1e-11 74.7 136 37.5
Sp3g18640 Schrenkiella parvula HOM05D002065 ORTHO05D002050 1.1e-11 74.7 167 32.9
Aa31LG8G7400 Aethionema arabicum HOM05D002065 ORTHO05D002050 1.8e-11 73.9 181 32.6
MD03G1210900 Malus domestica HOM05D002065 ORTHO05D002050 1.8e-11 73.9 218 28.9
SalBow8G3023 Salvia bowleyana HOM05D002065 ORTHO05D002050 1.8e-11 73.9 190 30.0
ClCG05G014750 Citrullus lanatus HOM05D002065 ORTHO05D002050 3.1e-11 73.2 143 34.3
DCAR_008385 Daucus carota HOM05D059228 ORTHO05D002050 3.1e-11 73.2 128 34.4
MELO3C018104.2 Cucumis melo HOM05D002065 ORTHO05D002050 4.1e-11 72.8 180 30.6
Lj8C77T4 Lonicera japonica HOM05D002065 ORTHO05D002050 4.1e-11 72.8 189 29.6
CiPaw.11G184100 Carya illinoinensis HOM05D002065 ORTHO05D002050 5.3e-11 72.4 175 31.4
Dinv22303 Davidia involucrata HOM05D002065 ORTHO05D002050 5.3e-11 72.4 154 33.1
Oeu025490.1 Olea europaea HOM05D002065 ORTHO05D002050 5.3e-11 72.4 184 34.8
Oeu025507.1 Olea europaea HOM05D002065 ORTHO05D002050 5.3e-11 72.4 184 35.3
DCAR_022526 Daucus carota HOM05D002065 ORTHO05D002050 7.0e-11 72.0 195 29.2
Oeu062613.1 Olea europaea HOM05D002065 ORTHO05D002050 7.0e-11 72.0 169 33.1
Oeu025506.1 Olea europaea HOM05D002065 ORTHO05D002050 9.1e-11 71.6 184 34.8
BcaC05g28309 Brassica carinata HOM05D002065 ORTHO05D002050 1.2e-10 71.2 207 29.5
C05p43700 Brassica napus HOM05D002065 ORTHO05D002050 1.2e-10 71.2 207 29.5
CAN.G140.7 Capsicum annuum HOM05D002065 ORTHO05D002050 1.2e-10 71.2 159 31.4
Lj8C77T5 Lonicera japonica HOM05D002065 ORTHO05D002050 1.2e-10 71.2 183 29.0
Oeu025495.1 Olea europaea HOM05D002065 ORTHO05D002050 1.2e-10 71.2 184 34.8
Aqoxy4G02007 Aquilegia oxysepala HOM05D002065 ORTHO05D002050 1.6e-10 70.9 183 31.7
MD11G1225800 Malus domestica HOM05D002065 ORTHO05D002050 1.6e-10 70.9 214 29.4
Peaxi162Scf00192g00005 Petunia axillaris HOM05D002065 ORTHO05D002050 2.0e-10 70.5 116 33.6
Actinidia09932 Actinidia chinensis HOM05D002065 ORTHO05D002050 2.7e-10 70.1 177 34.5
A05p28250 Brassica napus HOM05D001038 ORTHO05D019929 3.5e-10 69.7 157 31.2
PGSC0003DMG400032231 Solanum tuberosum HOM05D002065 ORTHO05D002050 3.5e-10 69.7 142 32.4
BraA05t21707Z Brassica rapa HOM05D002065 ORTHO05D002050 4.5e-10 69.3 194 29.9
Ciclev10009510m.g Citrus clementina HOM05D002065 ORTHO05D002050 5.9e-10 68.9 181 30.9
MBI18_g44238_MAGBIO Magnolia biondii HOM05D002065 ORTHO05D002050 7.7e-10 68.6 169 33.1
MD03G1211100 Malus domestica HOM05D002065 ORTHO05D002050 1.3e-09 67.8 209 28.2
TWI38G0302 Tripterygium wilfordii HOM05D002065 ORTHO05D002050 1.3e-09 67.8 169 32.5
Solyc01g006320.4 Solanum lycopersicum HOM05D002065 ORTHO05D002050 1.7e-09 67.4 171 31.0
Atru.chr2.3214 Acer truncatum HOM05D002065 ORTHO05D002050 2.2e-09 67.0 220 26.8
MBI18_g41997_MAGBIO Magnolia biondii HOM05D002065 ORTHO05D002050 2.2e-09 67.0 169 33.1
Medtr4g081200 Medicago truncatula HOM05D002065 ORTHO05D002050 2.2e-09 67.0 197 29.9
FAN16G0462 Fragaria x ananassa HOM05D002065 ORTHO05D002050 2.9e-09 66.6 183 30.6
BcaB06g26126 Brassica carinata HOM05D002065 ORTHO05D002050 3.8e-09 66.2 203 29.1
AT3G20590 Arabidopsis thaliana HOM05D002065 ORTHO05D002050 5.0e-09 65.9 195 30.3
MD03G1211000 Malus domestica HOM05D002065 ORTHO05D002050 5.0e-09 65.9 218 28.9
TWI39G0180 Tripterygium wilfordii HOM05D002065 ORTHO05D002050 5.0e-09 65.9 181 31.5
FAN21G3193 Fragaria x ananassa HOM05D002065 ORTHO05D002050 6.5e-09 65.5 183 30.1
Manes.03G123200 Manihot esculenta HOM05D002065 ORTHO05D002050 6.5e-09 65.5 166 29.5
PSO017G0621 Papaver somniferum HOM05D002065 ORTHO05D002050 6.5e-09 65.5 144 31.9
Sopen01g002320 Solanum pennellii HOM05D002065 ORTHO05D002050 6.5e-09 65.5 130 33.8
Sc01g0007380 Simmondsia chinensis HOM05D002065 ORTHO05D002050 8.5e-09 65.1 172 31.4
TAR626G1743 Trochodendron aralioides HOM05D002065 ORTHO05D002050 1.1e-08 64.7 176 30.7
AL3G34460 Arabidopsis lyrata HOM05D002065 ORTHO05D002050 1.5e-08 64.3 166 31.3
CARHR096380 Cardamine hirsuta HOM05D002065 ORTHO05D002050 1.5e-08 64.3 173 30.1
A01p34210 Brassica napus HOM05D002065 ORTHO05D002050 1.9e-08 63.9 162 29.0
BraA01t03521Z Brassica rapa HOM05D002065 ORTHO05D002050 1.9e-08 63.9 162 29.0
MBI18_g44237_MAGBIO Magnolia biondii HOM05D002065 ORTHO05D002050 1.9e-08 63.9 169 32.0
AT3G20610 Arabidopsis thaliana HOM05D002065 ORTHO05D002050 2.5e-08 63.5 156 31.4
CAN.G140.6 Capsicum annuum HOM05D002065 ORTHO05D002050 2.5e-08 63.5 123 32.5
PSO675G3505 Papaver somniferum HOM05D002065 ORTHO05D002050 2.5e-08 63.5 134 35.1
Sp3g18650 Schrenkiella parvula HOM05D002065 ORTHO05D002050 2.5e-08 63.5 148 31.1
BcaC09g49003 Brassica carinata HOM05D002065 ORTHO05D002050 4.2e-08 62.8 164 30.5
BolC1t04321H Brassica oleracea HOM05D002065 ORTHO05D002050 4.2e-08 62.8 164 30.5
AT3G20600 Arabidopsis thaliana HOM05D002065 ORTHO05D002050 5.5e-08 62.4 168 32.1
BcaB04g20643 Brassica carinata HOM05D002065 ORTHO05D002050 5.5e-08 62.4 172 30.8
Nn1g07007 Nelumbo nucifera HOM05D002065 ORTHO05D002050 5.5e-08 62.4 217 29.0
Potri.011G133900 Populus trichocarpa HOM05D002065 ORTHO05D002050 5.5e-08 62.4 209 31.6
A03p41840 Brassica napus HOM05D002065 ORTHO05D002050 7.2e-08 62.0 181 28.7
BraA03t13337Z Brassica rapa HOM05D002065 ORTHO05D002050 7.2e-08 62.0 181 28.7
CANSAT64G1415 Cannabis sativa HOM05D002065 ORTHO05D002050 7.2e-08 62.0 214 29.9
Eucgr.F00981 Eucalyptus grandis HOM05D002065 ORTHO05D002050 7.2e-08 62.0 169 33.7
FvH4_3g21890 Fragaria vesca HOM05D002065 ORTHO05D002050 9.4e-08 61.6 210 27.1
FAN11G3928 Fragaria x ananassa HOM05D002065 ORTHO05D002050 9.4e-08 61.6 210 27.1
RcHm_v2.0_Chr5g0037701 Rosa chinensis HOM05D002065 ORTHO05D002050 9.4e-08 61.6 180 28.9
BcaB04g19117 Brassica carinata HOM05D002065 ORTHO05D002050 1.2e-07 61.2 171 29.2
Nn1g07008 Nelumbo nucifera HOM05D002065 ORTHO05D002050 1.2e-07 61.2 168 28.6
Sed0007986 Sechium edule HOM05D002065 ORTHO05D002050 1.2e-07 61.2 167 29.9
TPR.G25922 Trifolium pratense HOM05D002065 ORTHO05D002050 1.2e-07 61.2 204 27.5
Sp3g18630 Schrenkiella parvula HOM05D002065 ORTHO05D002050 2.1e-07 60.5 126 34.1
Aa31LG8G7410 Aethionema arabicum HOM05D002065 ORTHO05D002050 3.6e-07 59.7 154 31.2
COL.COLO4_31720 Corchorus olitorius HOM05D004864 ORTHO05D005393 3.6e-07 59.7 126 31.0
PSO541G3516 Papaver somniferum HOM05D002065 ORTHO05D002050 3.6e-07 59.7 197 28.4
Prupe.4G204400 Prunus persica HOM05D002065 ORTHO05D002050 3.6e-07 59.7 214 28.5
BcaC01g03546 Brassica carinata HOM05D002065 ORTHO05D002050 4.7e-07 59.3 201 28.4
C03p51220 Brassica napus HOM05D002065 ORTHO05D002050 4.7e-07 59.3 201 28.4
BolC3t17412H Brassica oleracea HOM05D002065 ORTHO05D002050 4.7e-07 59.3 201 28.4
ECA246G0552 Erigeron canadensis HOM05D059448 ORTHO05D035029 4.7e-07 59.3 167 32.3
Lalb_Chr14g0366161 Lupinus albus HOM05D002065 ORTHO05D002050 6.1e-07 58.9 173 28.3
PSO675G5185 Papaver somniferum HOM05D002065 ORTHO05D002050 6.1e-07 58.9 160 30.6
VMungo1080G1659 Vigna mungo HOM05D002065 ORTHO05D002050 6.1e-07 58.9 175 25.7
Migut.M00312 Erythranthe guttata HOM05D002065 ORTHO05D002050 8.0e-07 58.5 148 33.1
PSO732G0449 Papaver somniferum HOM05D002065 ORTHO05D002050 8.0e-07 58.5 160 31.2
Migut.M00291 Erythranthe guttata HOM05D002065 ORTHO05D002050 1.0e-06 58.2 170 32.9
PSO675G1570 Papaver somniferum HOM05D002065 ORTHO05D002050 1.0e-06 58.2 143 28.7
Potri.001G418000 Populus trichocarpa HOM05D002065 ORTHO05D002050 1.0e-06 58.2 202 27.2
Sabra16G0283800 Salix brachista HOM05D002065 ORTHO05D002050 1.0e-06 58.2 162 30.2
Sed0026241 Sechium edule HOM05D002065 ORTHO05D002050 1.4e-06 57.8 148 30.4
Manes.15G076400 Manihot esculenta HOM05D002065 ORTHO05D002050 2.3e-06 57.0 165 27.3
Nitab4.5_0005041g0020 Nicotiana tabacum HOM05D002065 ORTHO05D002050 2.3e-06 57.0 138 28.3
AL3G34450 Arabidopsis lyrata HOM05D002065 ORTHO05D002050 3.0e-06 56.6 133 30.8
EL10Ac4g07955 Beta vulgaris HOM05D002065 ORTHO05D002050 3.0e-06 56.6 193 29.5
AUR62020551 Chenopodium quinoa HOM05D002065 ORTHO05D002050 3.0e-06 56.6 115 37.4
PSO500G0109 Papaver somniferum HOM05D002065 ORTHO05D002050 3.0e-06 56.6 140 32.1
PSO541G3356 Papaver somniferum HOM05D002065 ORTHO05D002050 3.0e-06 56.6 143 28.0
PGR083G2635 Punica granatum HOM05D002065 ORTHO05D002050 4.0e-06 56.2 182 30.2
Sp3g18610 Schrenkiella parvula HOM05D002065 ORTHO05D002050 4.0e-06 56.2 175 28.6
BcaC05g28307 Brassica carinata HOM05D002065 ORTHO05D002050 5.2e-06 55.8 115 32.2
PSO017G7112 Papaver somniferum HOM05D002065 ORTHO05D002050 6.8e-06 55.5 150 30.0
AUR62015649 Chenopodium quinoa HOM05D002065 ORTHO05D002050 8.8e-06 55.1 143 31.5
Eucgr.F00979 Eucalyptus grandis HOM05D002065 ORTHO05D002050 8.8e-06 55.1 130 34.6
Medtr2g082990 Medicago truncatula HOM05D002065 ORTHO05D002050 8.8e-06 55.1 167 26.9


User provided reference genes

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