Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_008373 Daucus carota HOM05D003247 ORTHO05D003974 6.6e-290 1000.0 496 100.0
Gohir.A03G018700 Gossypium hirsutum HOM05D003247 ORTHO05D003974 2.9e-245 851.7 494 82.4
Dinv37625 Davidia involucrata HOM05D003247 ORTHO05D003974 3.8e-245 851.3 494 82.8
Cpa.g.sc214.14 Carica papaya HOM05D003247 ORTHO05D003974 1.1e-244 849.7 494 82.8
Actinidia01994 Actinidia chinensis HOM05D003247 ORTHO05D003974 1.9e-244 849.0 494 83.2
HanXRQChr13g0416311 Helianthus annuus HOM05D003247 ORTHO05D003974 1.6e-243 845.9 494 82.6
Gohir.D03G150200 Gossypium hirsutum HOM05D003247 ORTHO05D003974 7.9e-243 843.6 494 81.8
TAR636G0433 Trochodendron aralioides HOM05D003247 ORTHO05D003974 7.9e-243 843.6 494 81.8
CiPaw.11G133400 Carya illinoinensis HOM05D003247 ORTHO05D003974 3.0e-242 841.6 494 81.2
Gorai.003G157400 Gossypium raimondii HOM05D003247 ORTHO05D003974 1.1e-241 839.7 495 81.6
SalBow1G5596 Salvia bowleyana HOM05D003247 ORTHO05D003974 1.9e-241 839.0 494 81.4
GSVIVG01019731001 Vitis vinifera HOM05D003247 ORTHO05D003974 7.4e-241 837.0 494 81.6
Dinv38927 Davidia involucrata HOM05D003247 ORTHO05D003974 1.3e-240 836.3 494 81.8
Thecc.03G281500 Theobroma cacao HOM05D003247 ORTHO05D003974 2.1e-240 835.5 494 81.2
Migut.A00742 Erythranthe guttata HOM05D003247 ORTHO05D003974 2.8e-240 835.1 494 81.0
MD14G1107600 Malus domestica HOM05D003247 ORTHO05D003974 2.8e-240 835.1 494 80.8
arahy.Tifrunner.gnm1.ann1.5U7DNF Arachis hypogaea HOM05D003247 ORTHO05D003974 4.8e-240 834.3 494 79.8
Sabra01G0077100 Salix brachista HOM05D003247 ORTHO05D003974 4.8e-240 834.3 494 81.6
CSS0019820 Camellia sinensis var. sinensis HOM05D003247 ORTHO05D003974 1.8e-239 832.4 494 81.4
CSS0047123 Camellia sinensis var. sinensis HOM05D003247 ORTHO05D003974 1.8e-239 832.4 494 81.4
MD06G1086400 Malus domestica HOM05D003247 ORTHO05D003974 2.4e-239 832.0 494 81.0
QL12p032548 Quercus lobata HOM05D003247 ORTHO05D003974 2.4e-239 832.0 494 81.2
arahy.Tifrunner.gnm1.ann1.1Z7M3S Arachis hypogaea HOM05D003247 ORTHO05D003974 3.1e-239 831.6 494 79.6
Duzib205G1189 Durio zibethinus HOM05D003247 ORTHO05D003974 4.0e-239 831.2 494 80.6
HanXRQChr03g0086871 Helianthus annuus HOM05D003247 ORTHO05D003974 4.0e-239 831.2 494 81.2
Eucgr.D01833 Eucalyptus grandis HOM05D003247 ORTHO05D003974 1.5e-238 829.3 494 79.6
Hund14825 Selenicereus undatus HOM05D003247 ORTHO05D003974 2.0e-238 828.9 494 80.4
TWI60G0271 Tripterygium wilfordii HOM05D003247 ORTHO05D003974 2.0e-238 828.9 494 81.4
Medtr8g098525 Medicago truncatula HOM05D003247 ORTHO05D003974 3.4e-238 828.2 494 80.6
Duzib084G1173 Durio zibethinus HOM05D003247 ORTHO05D003974 4.5e-238 827.8 494 81.0
Potri.003G129500 Populus trichocarpa HOM05D003247 ORTHO05D003974 4.5e-238 827.8 494 80.6
CANSAT35G0036 Cannabis sativa HOM05D003247 ORTHO05D003974 5.8e-238 827.4 494 80.4
Aqoxy5G04015 Aquilegia oxysepala HOM05D003247 ORTHO05D003974 2.2e-237 825.5 494 79.1
CDE05G0892 Ceratophyllum demersum HOM05D003247 ORTHO05D003974 2.2e-237 825.5 493 79.9
Ca_17516_v3 Cicer arietinum L. HOM05D003247 ORTHO05D003974 4.9e-237 824.3 494 79.8
FvH4_5g02730 Fragaria vesca HOM05D003247 ORTHO05D003974 1.1e-236 823.2 494 79.6
Ciclev10018808m.g Citrus clementina HOM05D003247 ORTHO05D003974 1.4e-236 822.8 494 80.2
PGR031G0275 Punica granatum HOM05D003247 ORTHO05D003974 1.9e-236 822.4 494 78.7
TPR.G12767 Trifolium pratense HOM05D003247 ORTHO05D003974 1.9e-236 822.4 494 79.1
Manes.02G020950 Manihot esculenta HOM05D003247 ORTHO05D003974 2.5e-236 822.0 494 80.6
Nn1g01570 Nelumbo nucifera HOM05D003247 ORTHO05D003974 3.2e-236 821.6 494 79.1
Nn6g33377 Nelumbo nucifera HOM05D003247 ORTHO05D003974 3.2e-236 821.6 494 79.8
FAN18G0212 Fragaria x ananassa HOM05D003247 ORTHO05D003974 4.2e-236 821.2 494 79.4
AUR62010702 Chenopodium quinoa HOM05D003247 ORTHO05D003974 5.5e-236 820.8 494 80.6
PSO832G0897 Papaver somniferum HOM05D003247 ORTHO05D003974 7.1e-236 820.5 494 78.9
MSTRG.1858 Avicennia marina HOM05D003247 ORTHO05D003974 9.3e-236 820.1 494 79.8
ECA240G1820 Erigeron canadensis HOM05D003247 ORTHO05D003974 1.2e-235 819.7 494 80.6
Rhsim02G0233100 Rhododendron simsii HOM05D003247 ORTHO05D003974 1.2e-235 819.7 494 80.2
RhsimUnG0160000 Rhododendron simsii HOM05D003247 ORTHO05D003974 1.2e-235 819.7 494 80.2
ATR0680G039 Amborella trichopoda HOM05D003247 ORTHO05D003974 2.1e-235 818.9 494 79.8
Lj8A219G33 Lonicera japonica HOM05D003247 ORTHO05D003974 2.7e-235 818.5 496 81.7
Glyma.08G015900 Glycine max HOM05D003247 ORTHO05D003974 7.9e-235 817.0 494 79.1
Psat7g031800 Pisum sativum HOM05D003247 ORTHO05D003974 7.9e-235 817.0 494 79.4
Cc08_g14910 Coffea canephora HOM05D003247 ORTHO05D003974 1.8e-234 815.8 494 80.0
Migut.E01080 Erythranthe guttata HOM05D003247 ORTHO05D003974 2.3e-234 815.5 494 79.4
HPP92_025967 Vanilla planifolia HOM05D003247 ORTHO05D003974 3.9e-234 814.7 494 79.8
Glyma.05G209200 Glycine max HOM05D003247 ORTHO05D003974 5.1e-234 814.3 494 78.7
PSO063G5587 Papaver somniferum HOM05D003247 ORTHO05D003974 5.1e-234 814.3 494 78.7
FAN08G0767 Fragaria x ananassa HOM05D003247 ORTHO05D003974 6.7e-234 813.9 494 78.5
Haze_08801 Corylus avellana HOM05D003247 ORTHO05D003974 8.7e-234 813.5 482 80.9
Lj4g0006056 Lotus japonicus HOM05D003247 ORTHO05D003974 1.5e-233 812.8 494 78.9
FAN13G0605 Fragaria x ananassa HOM05D003247 ORTHO05D003974 1.9e-233 812.4 494 78.3
FAN04G2168 Fragaria x ananassa HOM05D003247 ORTHO05D003974 4.3e-233 811.2 494 78.5
RcHm_v2.0_Chr7g0197201 Rosa chinensis HOM05D003247 ORTHO05D003974 7.4e-233 810.4 494 78.3
Lsat_1_v5_gn_6_86420 Lactuca sativa HOM05D003247 ORTHO05D003974 1.3e-232 809.7 494 79.8
Sc01g0005540 Simmondsia chinensis HOM05D003247 ORTHO05D003974 1.3e-232 809.7 494 78.7
Lalb_Chr05g0222801 Lupinus albus HOM05D003247 ORTHO05D003974 1.6e-232 809.3 494 78.3
vmacro11386 Vaccinium macrocarpon HOM05D003247 ORTHO05D003974 1.6e-232 809.3 503 78.3
MBI18_g02832_MAGBIO Magnolia biondii HOM05D003247 ORTHO05D003974 2.8e-232 808.5 496 78.0
Phvul.002G290904 Phaseolus vulgaris HOM05D003247 ORTHO05D003974 4.8e-232 807.7 494 77.9
VMungo0251G1424 Vigna mungo HOM05D003247 ORTHO05D003974 4.8e-232 807.7 494 78.7
Nitab4.5_0002975g0050 Nicotiana tabacum HOM05D003247 ORTHO05D003974 6.3e-232 807.4 494 80.6
THA.LOC104809378 Tarenaya hassleriana HOM05D003247 ORTHO05D003974 8.2e-232 807.0 494 80.2
AL2G11370 Arabidopsis lyrata HOM05D003247 ORTHO05D003974 1.1e-231 806.6 494 79.4
AT1G63770 Arabidopsis thaliana HOM05D003247 ORTHO05D003974 1.1e-231 806.6 494 79.1
Peaxi162Scf00119g00138 Petunia axillaris HOM05D003247 ORTHO05D003974 1.4e-231 806.2 494 80.0
Lalb_Chr09g0332971 Lupinus albus HOM05D003247 ORTHO05D003974 1.8e-231 805.8 494 78.5
CARHR047420 Cardamine hirsuta HOM05D003247 ORTHO05D003974 3.1e-231 805.1 494 79.1
BcaC02g10366 Brassica carinata HOM05D003247 ORTHO05D003974 5.3e-231 804.3 494 78.7
MBI17_g42619_MAGBIO Magnolia biondii HOM05D003247 ORTHO05D003974 1.2e-230 803.1 494 77.9
Carub.0002s0107 Capsella rubella HOM05D003247 ORTHO05D003974 1.5e-230 802.7 494 78.7
BcaB07g31551 Brassica carinata HOM05D003247 ORTHO05D003974 4.5e-230 801.2 494 78.3
Thhalv10023233m.g Eutrema salsugineum HOM05D003247 ORTHO05D003974 2.9e-229 798.5 494 78.1
PSO210G5648 Papaver somniferum HOM05D003247 ORTHO05D003974 2.9e-229 798.5 494 76.9
Actinidia14574 Actinidia chinensis HOM05D003247 ORTHO05D003974 1.4e-228 796.2 469 81.9
CAN.G774.61 Capsicum annuum HOM05D003247 ORTHO05D003974 2.5e-228 795.4 494 79.1
Sopen08g029560 Solanum pennellii HOM05D003247 ORTHO05D003974 3.2e-228 795.0 494 79.1
A06p04610 Brassica napus HOM05D003247 ORTHO05D003974 4.2e-228 794.7 505 76.6
BraA06t23665Z Brassica rapa HOM05D003247 ORTHO05D003974 4.2e-228 794.7 505 76.6
C04p29680 Brassica napus HOM05D003247 ORTHO05D003974 5.5e-228 794.3 509 76.4
Prupe.5G103000 Prunus persica HOM05D003247 ORTHO05D003974 1.2e-227 793.1 472 79.4
Sed0003481 Sechium edule HOM05D003247 ORTHO05D003974 1.0e-226 790.0 494 77.5
EL10Ac5g12795 Beta vulgaris HOM05D003247 ORTHO05D003974 3.0e-226 788.5 523 74.0
BolC4t24494H Brassica oleracea HOM05D003247 ORTHO05D003974 3.0e-226 788.5 518 74.9
THA.LOC104815066 Tarenaya hassleriana HOM05D003247 ORTHO05D003974 3.0e-226 788.5 494 77.7
THA.LOC104817937 Tarenaya hassleriana HOM05D003247 ORTHO05D003974 1.1e-225 786.6 500 76.8
PSO210G5645 Papaver somniferum HOM05D003247 ORTHO05D003974 1.5e-225 786.2 494 75.7
Atru.chr9.2165 Acer truncatum HOM05D003247 ORTHO05D003974 2.5e-225 785.4 494 77.7
CsaV3_5G002690 Cucumis sativus L. HOM05D003247 ORTHO05D003974 7.4e-225 783.9 495 76.6
Sabra01G0077200 Salix brachista HOM05D003247 ORTHO05D003974 7.4e-225 783.9 494 78.3
Zm00001eb038870 Zea mays HOM05D003247 ORTHO05D003974 2.6e-222 775.4 494 74.9
unitig_0.g1141 Utricularia gibba HOM05D005096 ORTHO05D003974 3.4e-222 775.0 526 70.9
Nitab4.5_0001615g0030 Nicotiana tabacum HOM05D003247 ORTHO05D003974 1.9e-220 769.2 470 80.2
Sed0014492 Sechium edule HOM05D003247 ORTHO05D003974 1.9e-220 769.2 494 75.3
AUR62017183 Chenopodium quinoa HOM05D003247 ORTHO05D003974 6.1e-219 764.2 494 76.5
BraA06t25281Z Brassica rapa HOM05D003247 ORTHO05D003974 2.3e-218 762.3 494 75.7
TPR.G28250 Trifolium pratense HOM05D003247 ORTHO05D003974 4.8e-216 754.6 499 73.3
Ah.02g110410 Amaranthus hybridus HOM05D003247 ORTHO05D003974 5.9e-214 747.7 494 73.9
Oeu011040.2 Olea europaea HOM05D003247 ORTHO05D003974 1.1e-212 743.4 595 64.4
Lalb_Chr05g0224671 Lupinus albus HOM05D003247 ORTHO05D003974 3.6e-211 738.4 497 72.4
unitig_61.g26270 Utricularia gibba HOM05D003247 ORTHO05D003974 6.7e-210 734.2 469 73.8
TWI81G0748 Tripterygium wilfordii HOM05D003247 ORTHO05D003974 3.7e-208 728.4 494 74.3
EL10Ac9g20777 Beta vulgaris HOM05D003247 ORTHO05D003974 6.5e-205 717.6 494 71.3
CSS0029032 Camellia sinensis var. sinensis HOM05D003247 ORTHO05D003974 1.1e-204 716.8 419 81.6
SGA_v2.0_scaffold173G39167 Striga asiatica HOM05D003247 ORTHO05D003974 8.0e-203 710.7 452 76.1
MELO3C005688.2 Cucumis melo HOM05D003247 ORTHO05D003974 1.7e-200 703.0 510 69.6
Aa31LG2G950 Aethionema arabicum HOM05D003247 ORTHO05D003974 1.1e-199 700.3 523 68.8
Lsat_1_v5_gn_6_86400 Lactuca sativa HOM05D003247 ORTHO05D003974 4.8e-192 674.9 494 68.4
Sc01g0009690 Simmondsia chinensis HOM05D003247 ORTHO05D003974 9.5e-188 660.6 407 77.9
Mapoly0042s0035 Marchantia polymorpha HOM05D003247 ORTHO05D003974 6.8e-186 654.4 494 64.4
Pp3c26_1330 Physcomitrium patens HOM05D003247 ORTHO05D003974 9.2e-183 644.0 495 62.4
A06p21950 Brassica napus HOM05D003247 ORTHO05D003974 2.3e-181 639.4 406 75.9
Pp3c15_1150 Physcomitrium patens HOM05D003247 ORTHO05D003974 7.3e-180 634.4 495 62.8
AagrBONN_evm.TU.Sc2ySwM_228.2960 Anthoceros agrestis HOM05D003247 ORTHO05D003974 1.8e-178 629.8 494 62.3
Pp3c9_1240 Physcomitrium patens HOM05D003247 ORTHO05D003974 2.3e-178 629.4 495 62.4
Gohir.D08G202250 Gossypium hirsutum HOM05D003247 ORTHO05D003974 4.9e-176 621.7 432 71.3
Gohir.A08G183600 Gossypium hirsutum HOM05D003247 ORTHO05D003974 2.5e-172 609.4 494 63.6
SMO119G0190 Selaginella moellendorffii HOM05D003247 ORTHO05D003974 3.3e-172 609.0 497 61.2
SMO119G0357 Selaginella moellendorffii HOM05D003247 ORTHO05D003974 1.2e-171 607.1 497 60.8
BolC6t35397H Brassica oleracea HOM05D003247 ORTHO05D003974 2.1e-171 606.3 473 66.0
SMO119G0209 Selaginella moellendorffii HOM05D003247 ORTHO05D003974 3.6e-171 605.5 497 60.8
SMO351G0363 Selaginella moellendorffii HOM05D003247 ORTHO05D003974 1.8e-170 603.2 497 60.6
BcaC08g43016 Brassica carinata HOM05D003247 ORTHO05D003974 2.4e-167 592.8 499 61.7
C06p02710 Brassica napus HOM05D003247 ORTHO05D003974 2.4e-167 592.8 499 61.7
SHI07163 Sapria himalayana HOM05D003247 ORTHO05D003974 3.9e-165 585.5 406 70.2
Potri.001G101975 Populus trichocarpa HOM05D003247 ORTHO05D003974 3.7e-160 568.9 342 80.4
CBR_g951 Chara braunii HOM05D003247 ORTHO05D003974 6.4e-160 568.2 493 56.4
CBR_g30015 Chara braunii HOM05D003247 ORTHO05D003974 5.6e-156 555.1 541 51.0
MCO16G652 Micromonas commoda HOM05D003247 ORTHO05D003974 8.6e-149 531.2 499 54.7
HanXRQChr03g0086881 Helianthus annuus HOM05D003247 ORTHO05D003974 6.0e-142 508.4 310 79.4
Lalb_Chr16g0390071 Lupinus albus HOM05D003247 ORTHO05D003974 9.6e-140 501.1 306 78.1
Gorai.004G213400 Gossypium raimondii HOM05D003247 ORTHO05D003974 5.8e-137 491.9 494 55.5
Potri.001G102126 Populus trichocarpa HOM05D003247 ORTHO05D003974 2.2e-128 463.4 297 79.5
TAR629G1189 Trochodendron aralioides HOM05D003247 ORTHO05D003974 3.2e-127 459.5 464 53.9
SMO169G0195 Selaginella moellendorffii HOM05D003247 ORTHO05D003974 2.7e-126 456.4 448 50.2
Ah.12g051740 Amaranthus hybridus HOM05D003247 ORTHO05D003974 3.9e-125 452.6 281 76.5
Cre17.g736650 Chlamydomonas reinhardtii HOM05D003247 ORTHO05D003974 1.2e-121 441.0 531 45.2
CDE08G1495 Ceratophyllum demersum HOM05D003247 ORTHO05D003974 2.6e-121 439.9 271 76.0
PRCOL_00005594 Prasinoderma coloniale HOM05D003247 ORTHO05D003974 4.5e-105 386.0 512 43.0
Ah.12g051750 Amaranthus hybridus HOM05D003247 ORTHO05D003974 2.0e-92 344.0 215 76.7
Medtr8g098545 Medicago truncatula HOM05D003247 ORTHO05D003974 1.2e-86 324.7 279 62.7
MCO13G113 Micromonas commoda HOM05D003247 ORTHO05D003974 2.0e-81 307.4 534 38.2
Zm00001eb326750 Zea mays HOM05D003247 ORTHO05D003974 1.8e-66 257.7 161 72.7
Zm00001eb070300 Zea mays HOM05D003247 ORTHO05D003974 9.5e-63 245.4 147 76.9
Medtr8g098535 Medicago truncatula HOM05D003247 ORTHO05D003974 4.1e-58 229.9 135 77.0
Lalb_Chr16g0390081 Lupinus albus HOM05D003247 ORTHO05D003974 4.6e-57 226.5 145 73.8
Cre04.g213250 Chlamydomonas reinhardtii HOM05D003247 ORTHO05D003974 7.3e-55 219.2 404 36.4
Potri.001G102051 Populus trichocarpa HOM05D003247 ORTHO05D003974 6.6e-48 196.1 108 84.3
HanXRQChr07g0190431 Helianthus annuus HOM05D003247 ORTHO05D003974 3.1e-45 187.2 112 78.6
C07p00320 Brassica napus HOM05D003247 ORTHO05D032812 5.2e-45 186.4 156 59.6
CDE08G0631 Ceratophyllum demersum HOM05D003247 ORTHO05D003974 5.4e-42 176.4 108 77.8
COL.COLO4_00113 Corchorus olitorius HOM05D003247 ORTHO05D003974 8.9e-37 159.1 88 85.2
SalBow1G0073 Salvia bowleyana HOM05D003247 ORTHO05D003974 3.9e-32 143.7 79 84.8
BcaC06g36754 Brassica carinata HOM05D003247 ORTHO05D032812 8.7e-32 142.5 95 65.3
BolC7t40481H Brassica oleracea HOM05D003247 ORTHO05D032812 1.2e-25 122.1 78 67.9
PSO149G0001 Papaver somniferum HOM05D003247 ORTHO05D003974 2.7e-25 120.9 63 84.1
ClCG01G002580 Citrullus lanatus HOM05D003247 ORTHO05D003974 1.8e-21 108.2 51 92.2
C07p00300 Brassica napus HOM05D003247 ORTHO05D042289 2.4e-13 81.3 68 64.7
CBR_g30016 Chara braunii HOM05D003247 ORTHO05D003974 1.5e-12 78.6 92 45.7
Lsat_1_v5_gn_2_26081 Lactuca sativa HOM05D003247 ORTHO05D002149 5.8e-12 76.6 38 86.8
BolC7t40479H Brassica oleracea HOM05D003247 ORTHO05D042289 9.9e-12 75.9 68 60.3
Lsat_1_v5_gn_5_94840 Lactuca sativa HOM05D002109 ORTHO05D002149 1.3e-11 75.5 38 86.8
ECA240G2658 Erigeron canadensis HOM05D000167 ORTHO05D000994 1.6e-06 58.5 31 77.4


User provided reference genes

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