Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_008334 Daucus carota HOM05D006148 ORTHO05D007955 4.0e-67 258.1 140 100.0
DCAR_005581 Daucus carota HOM05D006148 ORTHO05D007955 3.4e-50 201.8 139 77.7
CSS0033428 Camellia sinensis var. sinensis HOM05D006148 ORTHO05D007955 4.7e-44 181.4 137 68.6
Eucgr.D02128 Eucalyptus grandis HOM05D006148 ORTHO05D007955 4.7e-44 181.4 138 65.2
Hma1.2p1_0840F.1_g226570 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 4.7e-44 181.4 138 68.1
SGA_v2.0_scaffold40G15681 Striga asiatica HOM05D006148 ORTHO05D007955 1.1e-43 180.3 136 69.1
SGA_v2.0_scaffold377G50308 Striga asiatica HOM05D006148 ORTHO05D007955 1.8e-43 179.5 136 69.1
Actinidia10861 Actinidia chinensis HOM05D006148 ORTHO05D007955 3.1e-43 178.7 139 66.9
MSTRG.9371 Avicennia marina HOM05D006148 ORTHO05D007955 3.1e-43 178.7 139 66.2
Ciclev10022620m.g Citrus clementina HOM05D006148 ORTHO05D007955 5.2e-43 177.9 138 67.4
Dinv21692 Davidia involucrata HOM05D006148 ORTHO05D007955 6.9e-43 177.6 137 68.6
Lj3A721T48 Lonicera japonica HOM05D006148 ORTHO05D007955 2.0e-42 176.0 128 72.7
Oeu040676.1 Olea europaea HOM05D006148 ORTHO05D007955 4.4e-42 174.9 135 65.9
PGR031G0321 Punica granatum HOM05D006148 ORTHO05D007955 7.6e-42 174.1 133 67.7
Migut.I00620 Erythranthe guttata HOM05D006148 ORTHO05D007955 1.7e-41 172.9 139 64.7
Cc02_g08620 Coffea canephora HOM05D006148 ORTHO05D007955 2.9e-41 172.2 137 65.0
Oeu017209.1 Olea europaea HOM05D006148 ORTHO05D007955 3.8e-41 171.8 137 65.7
TAR375G0576 Trochodendron aralioides HOM05D006148 ORTHO05D007955 3.8e-41 171.8 138 65.2
TWI15G0129 Tripterygium wilfordii HOM05D006148 ORTHO05D007955 4.9e-41 171.4 129 67.4
Nitab4.5_0000506g0080 Nicotiana tabacum HOM05D006148 ORTHO05D007955 6.4e-41 171.0 126 72.2
Nitab4.5_0003456g0030 Nicotiana tabacum HOM05D006148 ORTHO05D007955 6.4e-41 171.0 126 72.2
Prupe.5G058400 Prunus persica HOM05D006148 ORTHO05D007955 8.4e-41 170.6 126 69.8
Rhsim07G0118900 Rhododendron simsii HOM05D006148 ORTHO05D007955 8.4e-41 170.6 131 66.4
unitig_46.g17987 Utricularia gibba HOM05D006148 ORTHO05D007955 1.9e-40 169.5 129 69.0
vmacro14126 Vaccinium macrocarpon HOM05D006148 ORTHO05D007955 1.9e-40 169.5 133 64.7
Atru.chr9.1220 Acer truncatum HOM05D006148 ORTHO05D007955 2.4e-40 169.1 129 69.8
MD04G1051900 Malus domestica HOM05D006148 ORTHO05D007955 2.4e-40 169.1 138 64.5
MD06G1048200 Malus domestica HOM05D006148 ORTHO05D007955 3.2e-40 168.7 138 64.5
Peaxi162Scf00190g00088 Petunia axillaris HOM05D006148 ORTHO05D007955 3.2e-40 168.7 138 65.9
Aqoxy7G03487 Aquilegia oxysepala HOM05D006148 ORTHO05D007955 7.1e-40 167.5 126 69.8
CSS0030063 Camellia sinensis var. sinensis HOM05D006148 ORTHO05D007955 7.1e-40 167.5 131 67.2
PGSC0003DMG400026249 Solanum tuberosum HOM05D006148 ORTHO05D007955 7.1e-40 167.5 139 63.3
Gohir.A12G213600 Gossypium hirsutum HOM05D006148 ORTHO05D007955 9.3e-40 167.2 137 63.5
Manes.02G044300 Manihot esculenta HOM05D006148 ORTHO05D007955 9.3e-40 167.2 138 63.0
unitig_747.g21320 Utricularia gibba HOM05D006148 ORTHO05D007955 9.3e-40 167.2 129 66.7
ClCG09G012770 Citrullus lanatus HOM05D006148 ORTHO05D007955 1.2e-39 166.8 139 63.3
Gohir.D12G216200 Gossypium hirsutum HOM05D006148 ORTHO05D007955 2.1e-39 166.0 137 63.5
Gorai.008G231600 Gossypium raimondii HOM05D006148 ORTHO05D007955 2.1e-39 166.0 137 63.5
Sed0014825 Sechium edule HOM05D006148 ORTHO05D007955 2.7e-39 165.6 138 61.6
Solyc08g077970.2 Solanum lycopersicum HOM05D006148 ORTHO05D007955 2.7e-39 165.6 139 62.6
RcHm_v2.0_Chr7g0205301 Rosa chinensis HOM05D006148 ORTHO05D007955 3.5e-39 165.2 137 62.0
Solyc06g060920.3 Solanum lycopersicum HOM05D006148 ORTHO05D007955 3.5e-39 165.2 138 63.0
CiPaw.12G047200 Carya illinoinensis HOM05D006148 ORTHO05D007955 4.6e-39 164.9 138 60.9
Sopen06g021070 Solanum pennellii HOM05D006148 ORTHO05D007955 4.6e-39 164.9 126 69.0
PGSC0003DMG400026577 Solanum tuberosum HOM05D006148 ORTHO05D007955 4.6e-39 164.9 126 69.0
CAN.G761.17 Capsicum annuum HOM05D006148 ORTHO05D007955 6.0e-39 164.5 139 61.9
CANSAT21G1845 Cannabis sativa HOM05D006148 ORTHO05D007955 7.8e-39 164.1 130 65.4
Lj2A228G47 Lonicera japonica HOM05D006148 ORTHO05D007955 1.3e-38 163.3 112 75.9
Sopen08g026480 Solanum pennellii HOM05D006148 ORTHO05D007955 1.3e-38 163.3 139 61.9
Nitab4.5_0007628g0010 Nicotiana tabacum HOM05D006148 ORTHO05D007955 2.3e-38 162.5 139 61.2
Potri.012G038600 Populus trichocarpa HOM05D006148 ORTHO05D007955 2.3e-38 162.5 133 63.9
Duzib068G0643 Durio zibethinus HOM05D006148 ORTHO05D007955 3.9e-38 161.8 138 60.9
FAN13G2154 Fragaria x ananassa HOM05D006148 ORTHO05D007955 1.9e-37 159.5 137 59.9
FAN13G3051 Fragaria x ananassa HOM05D006148 ORTHO05D007955 1.9e-37 159.5 137 59.9
SalBow1G4160 Salvia bowleyana HOM05D006148 ORTHO05D007955 1.9e-37 159.5 123 69.1
FvH4_5g20230 Fragaria vesca HOM05D006148 ORTHO05D007955 2.5e-37 159.1 137 59.9
MBI15_g47175_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 2.5e-37 159.1 128 64.8
Thecc.03G242700 Theobroma cacao HOM05D006148 ORTHO05D007955 2.5e-37 159.1 123 66.7
Rhsim07G0118700 Rhododendron simsii HOM05D006148 ORTHO05D007955 4.3e-37 158.3 149 58.4
Psat5g091640 Pisum sativum HOM05D006148 ORTHO05D007955 1.3e-36 156.8 139 60.4
CsaV3_3G049830 Cucumis sativus L. HOM05D006148 ORTHO05D007955 1.6e-36 156.4 126 64.3
Ca_20510_v3 Cicer arietinum L. HOM05D006148 ORTHO05D007955 4.8e-36 154.8 130 60.0
Lsat_1_v5_gn_3_16181 Lactuca sativa HOM05D006148 ORTHO05D007955 4.8e-36 154.8 137 57.7
MELO3C003333.2 Cucumis melo HOM05D006148 ORTHO05D007955 1.1e-35 153.7 125 63.2
ECA248G1075 Erigeron canadensis HOM05D006148 ORTHO05D007955 1.1e-35 153.7 137 56.9
Glyma.16G092500 Glycine max HOM05D006148 ORTHO05D007955 1.1e-35 153.7 134 58.2
Phvul.010G018500 Phaseolus vulgaris HOM05D006148 ORTHO05D007955 1.8e-35 152.9 130 60.0
Sed0021147 Sechium edule HOM05D006148 ORTHO05D007955 1.8e-35 152.9 130 60.0
Medtr3g086600 Medicago truncatula HOM05D006148 ORTHO05D007955 3.1e-35 152.1 139 59.0
HanXRQChr17g0550021 Helianthus annuus HOM05D006148 ORTHO05D007955 5.3e-35 151.4 130 59.2
Lalb_Chr15g0078661 Lupinus albus HOM05D006148 ORTHO05D007955 6.9e-35 151.0 138 55.8
Sabra12G0027000 Salix brachista HOM05D006148 ORTHO05D007955 6.9e-35 151.0 144 57.6
COL.COLO4_07508 Corchorus olitorius HOM05D006148 ORTHO05D007955 1.5e-34 149.8 138 56.5
Sc22g0005540 Simmondsia chinensis HOM05D006148 ORTHO05D007955 2.6e-34 149.1 138 59.4
Lj3g0001636 Lotus japonicus HOM05D006148 ORTHO05D007955 3.4e-34 148.7 139 56.8
TPR.G30538 Trifolium pratense HOM05D006148 ORTHO05D007955 4.5e-34 148.3 139 57.6
VMungo0331G0425 Vigna mungo HOM05D006148 ORTHO05D007955 4.5e-34 148.3 121 62.8
Glyma.09G078400 Glycine max HOM05D006148 ORTHO05D007955 7.6e-34 147.5 113 66.4
Aa31LG2G13090 Aethionema arabicum HOM05D006148 ORTHO05D007955 1.3e-33 146.7 131 58.0
arahy.Tifrunner.gnm1.ann1.0GR2GF Arachis hypogaea HOM05D006148 ORTHO05D007955 1.3e-33 146.7 131 53.4
arahy.Tifrunner.gnm1.ann1.L2DS42 Arachis hypogaea HOM05D006148 ORTHO05D007955 1.3e-33 146.7 131 53.4
FAN04G0567 Fragaria x ananassa HOM05D006148 ORTHO05D007955 1.3e-33 146.7 159 51.6
Carub.0007s2441 Capsella rubella HOM05D006148 ORTHO05D007955 4.9e-33 144.8 131 55.0
Lalb_Chr18g0047251 Lupinus albus HOM05D006148 ORTHO05D007955 4.9e-33 144.8 133 58.6
THA.LOC104812735 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 4.9e-33 144.8 138 56.5
THA.LOC104814463 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 6.4e-33 144.4 131 55.7
THA.LOC104807925 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 8.4e-33 144.1 131 58.0
FAN08G3523 Fragaria x ananassa HOM05D006148 ORTHO05D007955 1.9e-32 142.9 168 48.8
PSO541G2943 Papaver somniferum HOM05D006148 ORTHO05D007955 2.4e-32 142.5 124 58.1
CDE04G1348 Ceratophyllum demersum HOM05D006148 ORTHO05D007955 3.2e-32 142.1 125 61.6
EL10Ac5g12797 Beta vulgaris HOM05D006148 ORTHO05D007955 9.3e-32 140.6 125 59.2
AUR62017180 Chenopodium quinoa HOM05D006148 ORTHO05D007955 2.7e-31 139.0 136 54.4
HPP92_005702 Vanilla planifolia HOM05D006148 ORTHO05D007955 4.6e-31 138.3 124 58.9
A01p20300 Brassica napus HOM05D006148 ORTHO05D007955 6.0e-31 137.9 136 53.7
Haze_05448 Corylus avellana HOM05D006148 ORTHO05D007955 6.0e-31 137.9 200 44.0
Os04g0431800 Oryza sativa ssp. japonica HOM05D006148 ORTHO05D007955 6.0e-31 137.9 128 57.8
Sp7g17180 Schrenkiella parvula HOM05D006148 ORTHO05D007955 6.0e-31 137.9 137 53.3
BcaC09g50434 Brassica carinata HOM05D006148 ORTHO05D007955 7.9e-31 137.5 136 52.9
BraA01t01958Z Brassica rapa HOM05D006148 ORTHO05D007955 7.9e-31 137.5 136 52.9
C01p25460 Brassica napus HOM05D006148 ORTHO05D007955 1.0e-30 137.1 136 52.2
BolC1t02497H Brassica oleracea HOM05D006148 ORTHO05D007955 1.3e-30 136.7 136 52.9
Os02g0494600 Oryza sativa ssp. japonica HOM05D006148 ORTHO05D007955 1.3e-30 136.7 128 57.8
BcaNung00135 Brassica carinata HOM05D006148 ORTHO05D007955 1.8e-30 136.3 137 52.6
Hund11457 Selenicereus undatus HOM05D006148 ORTHO05D007955 3.0e-30 135.6 125 60.0
CARHR223570 Cardamine hirsuta HOM05D006148 ORTHO05D007955 8.7e-30 134.0 139 50.4
AT4G17010 Arabidopsis thaliana HOM05D006148 ORTHO05D007955 4.3e-29 131.7 131 52.7
PSO675G9254 Papaver somniferum HOM05D006148 ORTHO05D007955 4.3e-29 131.7 124 56.5
ATR0767G234 Amborella trichopoda HOM05D006148 ORTHO05D007955 3.6e-28 128.6 118 55.9
AL7G37710 Arabidopsis lyrata HOM05D006148 ORTHO05D007955 2.0e-26 122.9 131 49.6
Thhalv10026445m.g Eutrema salsugineum HOM05D006148 ORTHO05D007955 2.0e-26 122.9 137 48.9
Nn1g00796 Nelumbo nucifera HOM05D006148 ORTHO05D007955 9.9e-26 120.6 108 59.3
Hma1.2p1_1008F.1_g247180 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 1.7e-25 119.8 113 58.4
Zm00001eb422600 Zea mays HOM05D006148 ORTHO05D007955 5.5e-24 114.8 107 57.0
QL12p009037 Quercus lobata HOM05D006148 ORTHO05D007955 3.0e-22 109.0 296 30.1
vmacro00048 Vaccinium macrocarpon HOM05D006148 ORTHO05D007955 2.5e-21 105.9 120 53.3
MBI06_g25325_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 3.3e-21 105.5 100 53.0
Lj2A721G5 Lonicera japonica HOM05D006148 ORTHO05D007955 2.1e-20 102.8 73 75.3
Cpa.g.sc1152.2 Carica papaya HOM05D006148 ORTHO05D007955 4.9e-17 91.7 73 60.3
SEGI_12345 Sequoiadendron giganteum HOM05D006148 ORTHO05D007955 1.9e-16 89.7 133 40.6
Ah.07g196390 Amaranthus hybridus HOM05D006148 ORTHO05D007955 2.1e-15 86.3 91 53.8
AUR62027260 Chenopodium quinoa HOM05D006148 ORTHO05D007955 2.1e-12 76.3 136 36.8
AUR62010708 Chenopodium quinoa HOM05D006148 ORTHO05D007955 1.1e-11 73.9 134 36.6
Nitab4.5_0000500g0150 Nicotiana tabacum HOM05D006148 ORTHO05D007955 1.1e-11 73.9 139 36.7
Oeu017208.1 Olea europaea HOM05D002196 ORTHO05D002565 6.5e-09 64.7 61 54.1


User provided reference genes

Program Settings