Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_008330 Daucus carota HOM05D006150 ORTHO05D007745 2.8e-171 605.1 294 100.0
TAR636G1440 Trochodendron aralioides HOM05D006150 ORTHO05D007745 1.2e-137 493.4 295 80.0
MSTRG.6640 Avicennia marina HOM05D006150 ORTHO05D007745 5.9e-137 491.1 294 77.6
Rhsim07G0136400 Rhododendron simsii HOM05D006150 ORTHO05D007745 5.9e-137 491.1 297 79.1
Lj8A277T42 Lonicera japonica HOM05D006150 ORTHO05D007745 1.0e-136 490.3 286 80.4
CANSAT21G0710 Cannabis sativa HOM05D006150 ORTHO05D007745 2.5e-135 485.7 296 77.7
CSS0019555 Camellia sinensis var. sinensis HOM05D006150 ORTHO05D007745 4.2e-135 485.0 298 76.8
Hma1.2p1_0570F.1_g180430 Hydrangea macrophylla HOM05D006150 ORTHO05D007745 4.2e-135 485.0 285 78.9
Ciclev10021365m.g Citrus clementina HOM05D006150 ORTHO05D007745 2.7e-134 482.3 297 77.1
COL.COLO4_07285 Corchorus olitorius HOM05D006150 ORTHO05D007745 3.6e-134 481.9 296 78.7
Gohir.A12G212700 Gossypium hirsutum HOM05D006150 ORTHO05D007745 3.6e-134 481.9 297 78.1
Thecc.03G240100 Theobroma cacao HOM05D006150 ORTHO05D007745 7.9e-134 480.7 296 78.7
Gorai.008G230800 Gossypium raimondii HOM05D006150 ORTHO05D007745 1.8e-133 479.6 297 77.4
RcHm_v2.0_Chr7g0205681 Rosa chinensis HOM05D006150 ORTHO05D007745 2.3e-133 479.2 297 78.1
Duzib084G0008 Durio zibethinus HOM05D006150 ORTHO05D007745 5.1e-133 478.0 300 77.0
Gohir.D12G215200 Gossypium hirsutum HOM05D006150 ORTHO05D007745 1.5e-132 476.5 297 76.8
MD04G1055500 Malus domestica HOM05D006150 ORTHO05D007745 2.0e-132 476.1 296 76.7
Manes.01G089000 Manihot esculenta HOM05D006150 ORTHO05D007745 3.3e-132 475.3 300 76.0
Nn6g33757 Nelumbo nucifera HOM05D006150 ORTHO05D007745 1.7e-131 473.0 290 77.9
Potri.003G083600 Populus trichocarpa HOM05D006150 ORTHO05D007745 3.7e-131 471.9 280 80.0
Cfa012327 Carpinus fangiana HOM05D006150 ORTHO05D007745 4.8e-131 471.5 298 76.5
Atru.chr9.1206 Acer truncatum HOM05D006150 ORTHO05D007745 8.2e-131 470.7 293 75.4
PSO675G6476 Papaver somniferum HOM05D006150 ORTHO05D007745 1.1e-130 470.3 296 77.4
HanXRQChr17g0534011 Helianthus annuus HOM05D006150 ORTHO05D007745 1.4e-130 469.9 298 74.5
PGSC0003DMG400026243 Solanum tuberosum HOM05D006150 ORTHO05D007745 1.4e-130 469.9 296 75.0
AL7G37660 Arabidopsis lyrata HOM05D006150 ORTHO05D007745 1.8e-130 469.5 293 76.1
SalBow7G3619 Salvia bowleyana HOM05D006150 ORTHO05D007745 1.8e-130 469.5 282 77.3
Solyc08g077840.3 Solanum lycopersicum HOM05D006150 ORTHO05D007745 2.4e-130 469.2 296 75.0
CiPaw.11G072300 Carya illinoinensis HOM05D006150 ORTHO05D007745 7.0e-130 467.6 294 74.1
ClCG10G005070 Citrullus lanatus HOM05D006150 ORTHO05D007745 7.0e-130 467.6 295 74.6
EL10Ac5g12270 Beta vulgaris HOM05D006150 ORTHO05D007745 9.1e-130 467.2 294 76.2
Carub.0007s2437 Capsella rubella HOM05D006150 ORTHO05D007745 9.1e-130 467.2 295 75.3
CsaV3_3G004750 Cucumis sativus L. HOM05D006150 ORTHO05D007745 9.1e-130 467.2 295 74.9
Cc08_g11330 Coffea canephora HOM05D006150 ORTHO05D007745 1.2e-129 466.8 296 75.7
AT4G17050 Arabidopsis thaliana HOM05D006150 ORTHO05D007745 1.6e-129 466.5 299 75.6
BcaNung04656 Brassica carinata HOM05D006150 ORTHO05D007745 2.0e-129 466.1 296 74.7
CARHR223610 Cardamine hirsuta HOM05D006150 ORTHO05D007745 2.6e-129 465.7 299 74.2
Sopen08g026350 Solanum pennellii HOM05D006150 ORTHO05D007745 2.6e-129 465.7 296 74.7
Eucgr.D02133 Eucalyptus grandis HOM05D006150 ORTHO05D007745 3.5e-129 465.3 299 74.2
FvH4_5g20400 Fragaria vesca HOM05D006150 ORTHO05D007745 3.5e-129 465.3 287 77.7
Aqoxy5G02622 Aquilegia oxysepala HOM05D006150 ORTHO05D007745 4.5e-129 464.9 290 76.6
FAN04G1813 Fragaria x ananassa HOM05D006150 ORTHO05D007745 4.5e-129 464.9 299 75.6
PSO732G0290 Papaver somniferum HOM05D006150 ORTHO05D007745 4.5e-129 464.9 295 76.3
BraA03t14117Z Brassica rapa HOM05D006150 ORTHO05D007745 5.9e-129 464.5 296 74.7
BraA01t01953Z Brassica rapa HOM05D006150 ORTHO05D007745 1.3e-128 463.4 297 75.4
BolC1t02493H Brassica oleracea HOM05D006150 ORTHO05D007745 1.7e-128 463.0 292 75.0
MBI04_g13858_MAGBIO Magnolia biondii HOM05D006150 ORTHO05D007745 2.2e-128 462.6 293 75.1
Sed0022790 Sechium edule HOM05D006150 ORTHO05D007745 2.2e-128 462.6 292 74.3
TWI60G0542 Tripterygium wilfordii HOM05D006150 ORTHO05D007745 2.9e-128 462.2 276 77.5
A03p50280 Brassica napus HOM05D006150 ORTHO05D007745 5.0e-128 461.5 296 74.7
C07p48520 Brassica napus HOM05D006150 ORTHO05D007745 5.0e-128 461.5 303 73.3
BolC7t45360H Brassica oleracea HOM05D006150 ORTHO05D007745 5.0e-128 461.5 303 73.3
THA.LOC104807929 Tarenaya hassleriana HOM05D006150 ORTHO05D007745 5.0e-128 461.5 298 73.8
CAN.G572.11 Capsicum annuum HOM05D006150 ORTHO05D007745 6.5e-128 461.1 296 75.3
C07p48460 Brassica napus HOM05D006150 ORTHO05D007745 8.5e-128 460.7 301 74.1
ECA234G2169 Erigeron canadensis HOM05D006150 ORTHO05D007745 1.9e-127 459.5 295 74.2
Sp7g17140 Schrenkiella parvula HOM05D006150 ORTHO05D007745 2.5e-127 459.1 295 73.6
PSO732G0039 Papaver somniferum HOM05D006150 ORTHO05D007745 4.2e-127 458.4 262 80.9
Ah.12g053980 Amaranthus hybridus HOM05D006150 ORTHO05D007745 7.2e-127 457.6 298 73.5
FAN08G0760 Fragaria x ananassa HOM05D006150 ORTHO05D007745 7.2e-127 457.6 294 75.2
BcaC06g33538 Brassica carinata HOM05D006150 ORTHO05D007745 4.7e-126 454.9 304 72.4
Glyma.05G066500 Glycine max HOM05D006150 ORTHO05D007745 1.4e-125 453.4 295 72.9
BcaNung00130 Brassica carinata HOM05D006150 ORTHO05D007745 1.8e-125 453.0 298 73.2
Haze_08363 Corylus avellana HOM05D006150 ORTHO05D007745 1.8e-125 453.0 319 70.2
PGR031G0533 Punica granatum HOM05D006150 ORTHO05D007745 2.3e-125 452.6 259 80.7
C07p48390 Brassica napus HOM05D006150 ORTHO05D007745 8.8e-125 450.7 302 73.2
Glyma.17G148400 Glycine max HOM05D006150 ORTHO05D007745 1.1e-124 450.3 294 71.8
ATR0665G013 Amborella trichopoda HOM05D006150 ORTHO05D007745 2.6e-124 449.1 284 75.0
Lalb_Chr09g0329771 Lupinus albus HOM05D006150 ORTHO05D007745 3.3e-124 448.7 302 72.5
CDE12G0966 Ceratophyllum demersum HOM05D006150 ORTHO05D007745 6.3e-123 444.5 296 71.6
A01p20260 Brassica napus HOM05D006150 ORTHO05D007745 5.3e-122 441.4 283 75.3
Lj4g0002003 Lotus japonicus HOM05D006150 ORTHO05D007745 9.1e-122 440.7 298 70.8
TPR.G25747 Trifolium pratense HOM05D006150 ORTHO05D007745 9.1e-122 440.7 295 71.9
VMungo0251G1767 Vigna mungo HOM05D006150 ORTHO05D007745 1.6e-121 439.9 298 69.8
arahy.Tifrunner.gnm1.ann1.IPM3U6 Arachis hypogaea HOM05D006150 ORTHO05D007745 2.0e-121 439.5 295 71.5
Nitab4.5_0000500g0240 Nicotiana tabacum HOM05D006150 ORTHO05D007745 3.5e-121 438.7 298 72.5
Nitab4.5_0009451g0030 Nicotiana tabacum HOM05D006150 ORTHO05D007745 4.5e-121 438.3 302 71.5
Phvul.003G225600 Phaseolus vulgaris HOM05D006150 ORTHO05D007745 4.5e-121 438.3 294 69.7
QL12p008732 Quercus lobata HOM05D006150 ORTHO05D007745 2.2e-120 436.0 403 57.1
arahy.Tifrunner.gnm1.ann1.YY6LCE Arachis hypogaea HOM05D006150 ORTHO05D007745 5.0e-120 434.9 295 71.5
Os07g0495000 Oryza sativa ssp. japonica HOM05D006150 ORTHO05D007745 1.1e-119 433.7 280 72.1
Medtr4g099290 Medicago truncatula HOM05D006150 ORTHO05D007745 2.5e-119 432.6 299 69.6
Ca_22017_v3 Cicer arietinum L. HOM05D006150 ORTHO05D007745 2.1e-118 429.5 296 69.3
Thhalv10026866m.g Eutrema salsugineum HOM05D006150 ORTHO05D007745 2.7e-118 429.1 311 69.8
unitig_746.g26644 Utricularia gibba HOM05D006150 ORTHO05D007745 1.4e-117 426.8 290 68.3
HPP92_025744 Vanilla planifolia HOM05D006150 ORTHO05D007745 5.7e-116 421.4 288 70.5
Zm00001eb322060 Zea mays HOM05D006150 ORTHO05D007745 1.8e-114 416.4 276 71.7
Peaxi162Scf00301g00519 Petunia axillaris HOM05D006150 ORTHO05D007745 5.4e-114 414.8 281 71.2
Dinv28876 Davidia involucrata HOM05D006150 ORTHO05D007745 7.7e-113 411.0 246 79.3
vmacro00832 Vaccinium macrocarpon HOM05D006150 ORTHO05D007745 1.0e-112 410.6 296 68.2
SEGI_33649 Sequoiadendron giganteum HOM05D006150 ORTHO05D007745 1.3e-112 410.2 277 70.8
Actinidia02195 Actinidia chinensis HOM05D006150 ORTHO05D007745 6.5e-112 407.9 264 75.0
BcaC09g50439 Brassica carinata HOM05D006150 ORTHO05D007745 5.5e-111 404.8 293 68.6
C01p25410 Brassica napus HOM05D006150 ORTHO05D007745 5.5e-111 404.8 293 68.6
Psat4g076080 Pisum sativum HOM05D006150 ORTHO05D007745 4.9e-107 391.7 277 67.1
Aa31LG2G13130 Aethionema arabicum HOM05D006150 ORTHO05D007745 4.1e-106 388.7 323 61.0
Sc01g0007980 Simmondsia chinensis HOM05D006150 ORTHO05D007745 6.6e-104 381.3 242 74.0
Pp3c9_12580 Physcomitrium patens HOM05D006150 ORTHO05D007745 1.1e-103 380.6 294 63.3
AagrBONN_evm.TU.Sc2ySwM_228.2274 Anthoceros agrestis HOM05D006150 ORTHO05D007745 3.6e-102 375.6 251 70.1
Prupe.5G055300 Prunus persica HOM05D006150 ORTHO05D007745 1.8e-101 373.2 211 82.5
Mapoly0072s0097 Marchantia polymorpha HOM05D006150 ORTHO05D007745 3.0e-101 372.5 261 65.9
GSVIVG01003685001 Vitis vinifera HOM05D006150 ORTHO05D007745 2.3e-96 356.3 285 63.9
Oeu012348.1 Olea europaea HOM05D006150 ORTHO05D007745 3.0e-96 355.9 211 78.7
Lsat_1_v5_gn_3_15361 Lactuca sativa HOM05D006150 ORTHO05D007745 2.0e-92 343.2 251 67.7
SGA_v2.0_scaffold181G39680 Striga asiatica HOM05D006150 ORTHO05D007745 2.9e-91 339.3 243 69.5
AUR62007167 Chenopodium quinoa HOM05D006150 ORTHO05D007745 1.1e-90 337.4 202 78.7
AUR62018839 Chenopodium quinoa HOM05D006150 ORTHO05D007745 2.4e-90 336.3 202 77.2
Actinidia25909 Actinidia chinensis HOM05D006150 ORTHO05D007745 7.6e-76 288.1 297 53.9
Cre06.g290000 Chlamydomonas reinhardtii HOM05D006150 ORTHO05D007745 1.2e-68 264.2 258 51.6
MCO07G379 Micromonas commoda HOM05D006150 ORTHO05D007745 9.9e-68 261.2 269 48.3
Potri.001G150800 Populus trichocarpa HOM05D006150 ORTHO05D007745 8.7e-64 248.1 197 62.9
MD06G1047100 Malus domestica HOM05D006150 ORTHO05D007745 2.6e-60 236.5 265 50.2
MCO04G282 Micromonas commoda HOM05D006150 ORTHO05D007745 7.9e-57 224.9 262 46.9
MELO3C014174.2 Cucumis melo HOM05D006150 ORTHO05D007745 1.3e-51 207.6 288 45.8
Hma1.2p1_0570F.1_g180440 Hydrangea macrophylla HOM05D006150 ORTHO05D007745 1.2e-49 201.1 128 74.2
Sabra01G0120800 Salix brachista HOM05D006150 ORTHO05D007745 1.9e-47 193.7 154 62.3
FAN18G0603 Fragaria x ananassa HOM05D006150 ORTHO05D007745 1.6e-46 190.7 144 67.4
CSS0048254 Camellia sinensis var. sinensis HOM05D006150 ORTHO05D007745 1.0e-40 171.4 97 82.5
Sabra01G0120600 Salix brachista HOM05D006150 ORTHO05D007745 7.4e-39 165.2 164 55.5
PSO717G0125 Papaver somniferum HOM05D006150 ORTHO05D007745 5.5e-34 149.1 108 68.5
Cpa.g.sc98.38 Carica papaya HOM05D006150 ORTHO05D007745 1.9e-31 140.6 81 76.5
CBR_g38093 Chara braunii HOM05D006150 ORTHO05D007745 1.8e-29 134.0 66 86.4
BcaC01g03436 Brassica carinata HOM05D006150 ORTHO05D007745 2.5e-26 123.6 104 58.7
GSVIVG01021810001 Vitis vinifera HOM05D006150 ORTHO05D007745 5.2e-16 89.4 67 62.7
Cpa.g.sc98.35 Carica papaya HOM05D006150 ORTHO05D007745 3.7e-14 83.2 56 67.9
Oeu040463.1 Olea europaea HOM05D001574 ORTHO05D000708 7.2e-10 68.9 57 59.6
Lsat_1_v5_gn_6_74120 Lactuca sativa HOM05D006150 ORTHO05D233887 1.5e-07 61.2 33 75.8
MELO3C000773.2 Cucumis melo HOM05D006150 ORTHO05D007745 1.3e-06 58.2 39 69.2


User provided reference genes

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