Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_008325 Daucus carota HOM05D005357 ORTHO05D006354 1.5e-158 562.8 273 100.0
DCAR_005589 Daucus carota HOM05D005357 ORTHO05D006354 1.4e-71 273.9 274 55.1
Cc06_g01760 Coffea canephora HOM05D005357 ORTHO05D006354 2.1e-56 223.4 248 48.0
Duzib093G0024 Durio zibethinus HOM05D005357 ORTHO05D006354 3.4e-54 216.1 241 47.7
Hma1.2p1_0703F.1_g206335 Hydrangea macrophylla HOM05D005357 ORTHO05D006354 3.4e-54 216.1 258 45.7
Dinv37091 Davidia involucrata HOM05D005357 ORTHO05D006354 1.7e-53 213.8 213 50.7
COL.COLO4_14619 Corchorus olitorius HOM05D005357 ORTHO05D006354 3.7e-53 212.6 241 46.1
Gohir.D09G158500 Gossypium hirsutum HOM05D005357 ORTHO05D006354 8.3e-53 211.5 231 47.6
Gorai.006G180200 Gossypium raimondii HOM05D005357 ORTHO05D006354 8.3e-53 211.5 231 47.6
Haze_20938 Corylus avellana HOM05D005357 ORTHO05D006354 1.1e-52 211.1 244 44.7
QL07p036221 Quercus lobata HOM05D005357 ORTHO05D006354 1.1e-52 211.1 244 43.9
TWI74G0304 Tripterygium wilfordii HOM05D005357 ORTHO05D006354 1.1e-52 211.1 239 45.2
Manes.08G086900 Manihot esculenta HOM05D005357 ORTHO05D006354 1.4e-52 210.7 238 45.8
CANSAT35G1827 Cannabis sativa HOM05D005357 ORTHO05D006354 2.4e-52 209.9 227 46.7
Cfa017262 Carpinus fangiana HOM05D005357 ORTHO05D006354 2.4e-52 209.9 244 44.3
CiPaw.09G205000 Carya illinoinensis HOM05D005357 ORTHO05D006354 2.4e-52 209.9 242 43.8
Gohir.A09G163000 Gossypium hirsutum HOM05D005357 ORTHO05D006354 3.2e-52 209.5 244 45.9
Nitab4.5_0006254g0010 Nicotiana tabacum HOM05D005357 ORTHO05D006354 3.2e-52 209.5 245 47.3
Thecc.05G023500 Theobroma cacao HOM05D005357 ORTHO05D006354 3.2e-52 209.5 240 46.2
Duzib128G1243 Durio zibethinus HOM05D005357 ORTHO05D006354 4.1e-52 209.1 236 47.9
SGA_v2.0_scaffold85G26772 Striga asiatica HOM05D005357 ORTHO05D006354 4.1e-52 209.1 256 45.7
THA.LOC104827038 Tarenaya hassleriana HOM05D005357 ORTHO05D006354 4.1e-52 209.1 216 48.1
TWI77G0073 Tripterygium wilfordii HOM05D005357 ORTHO05D006354 4.1e-52 209.1 244 45.5
Ciclev10011563m.g Citrus clementina HOM05D005357 ORTHO05D006354 7.1e-52 208.4 247 45.7
Lj2A78G31 Lonicera japonica HOM05D005357 ORTHO05D006354 9.2e-52 208.0 244 48.8
SGA_v2.0_scaffold75G24995 Striga asiatica HOM05D005357 ORTHO05D006354 1.2e-51 207.6 258 44.6
Peaxi162Scf00141g00133 Petunia axillaris HOM05D005357 ORTHO05D006354 1.6e-51 207.2 245 47.8
Duzib106G1773 Durio zibethinus HOM05D005357 ORTHO05D006354 2.1e-51 206.8 240 46.2
Cpa.g.sc312.3 Carica papaya HOM05D005357 ORTHO05D006354 4.6e-51 205.7 258 43.0
Potri.006G095600 Populus trichocarpa HOM05D005357 ORTHO05D006354 4.6e-51 205.7 225 47.1
RcHm_v2.0_Chr3g0463991 Rosa chinensis HOM05D005357 ORTHO05D006354 4.6e-51 205.7 232 47.0
Nitab4.5_0000008g0560 Nicotiana tabacum HOM05D005357 ORTHO05D006354 6.0e-51 205.3 243 48.6
SalBow3G4061 Salvia bowleyana HOM05D005357 ORTHO05D006354 6.0e-51 205.3 273 44.7
TAR633G0560 Trochodendron aralioides HOM05D005357 ORTHO05D006354 1.7e-50 203.8 262 43.5
CsaV3_3G034230 Cucumis sativus L. HOM05D005357 ORTHO05D006354 2.3e-50 203.4 184 53.3
Hund09607 Selenicereus undatus HOM05D005357 ORTHO05D006354 2.3e-50 203.4 234 46.6
MSTRG.5603 Avicennia marina HOM05D005357 ORTHO05D006354 3.0e-50 203.0 265 44.9
EL10As5g23477 Beta vulgaris HOM05D005357 ORTHO05D006354 3.0e-50 203.0 209 48.8
Nn1g02852 Nelumbo nucifera HOM05D005357 ORTHO05D006354 3.0e-50 203.0 254 45.7
Prupe.6G269500 Prunus persica HOM05D005357 ORTHO05D006354 3.0e-50 203.0 223 48.4
TAR636G3085 Trochodendron aralioides HOM05D005357 ORTHO05D006354 3.0e-50 203.0 251 43.8
AUR62024704 Chenopodium quinoa HOM05D005357 ORTHO05D006354 5.1e-50 202.2 262 44.7
Gorai.012G111100 Gossypium raimondii HOM05D005357 ORTHO05D006354 5.1e-50 202.2 240 45.8
FAN02G3235 Fragaria x ananassa HOM05D005357 ORTHO05D006354 1.1e-49 201.1 213 47.9
Actinidia13789 Actinidia chinensis HOM05D005357 ORTHO05D006354 1.5e-49 200.7 190 52.6
FvH4_6g12190 Fragaria vesca HOM05D005357 ORTHO05D006354 1.5e-49 200.7 213 47.9
FAN09G0023 Fragaria x ananassa HOM05D005357 ORTHO05D006354 1.5e-49 200.7 213 47.9
FAN14G1666 Fragaria x ananassa HOM05D005357 ORTHO05D006354 1.5e-49 200.7 213 47.9
FAN14G2781 Fragaria x ananassa HOM05D005357 ORTHO05D006354 1.5e-49 200.7 213 47.9
Gohir.A04G087700 Gossypium hirsutum HOM05D005357 ORTHO05D006354 1.5e-49 200.7 258 44.6
Sed0007832 Sechium edule HOM05D005357 ORTHO05D006354 1.5e-49 200.7 245 43.7
Hund02920 Selenicereus undatus HOM05D005357 ORTHO05D006354 1.5e-49 200.7 210 48.6
GSVIVG01034021001 Vitis vinifera HOM05D005357 ORTHO05D006354 1.9e-49 200.3 183 52.5
FAN05G3392 Fragaria x ananassa HOM05D005357 ORTHO05D006354 2.5e-49 199.9 213 47.9
Aqoxy1G00739 Aquilegia oxysepala HOM05D005357 ORTHO05D006354 3.3e-49 199.5 235 46.4
AUR62011861 Chenopodium quinoa HOM05D005357 ORTHO05D006354 3.3e-49 199.5 263 44.1
MELO3C009198.2 Cucumis melo HOM05D005357 ORTHO05D006354 4.3e-49 199.1 225 47.6
ClCG10G021740 Citrullus lanatus HOM05D005357 ORTHO05D006354 7.3e-49 198.4 184 51.6
Migut.J00234 Erythranthe guttata HOM05D005357 ORTHO05D006354 7.3e-49 198.4 265 42.3
Actinidia29139 Actinidia chinensis HOM05D005357 ORTHO05D006354 9.6e-49 198.0 250 45.2
Ah.11g049570 Amaranthus hybridus HOM05D005357 ORTHO05D006354 9.6e-49 198.0 262 42.7
PSO384G3148 Papaver somniferum HOM05D005357 ORTHO05D006354 2.1e-48 196.8 231 46.8
CAN.G284.13 Capsicum annuum HOM05D005357 ORTHO05D006354 3.6e-48 196.1 247 44.5
Glyma.07G144300 Glycine max HOM05D005357 ORTHO05D006354 6.2e-48 195.3 245 42.4
HanXRQChr13g0406371 Helianthus annuus HOM05D005357 ORTHO05D006354 8.1e-48 194.9 246 46.3
arahy.Tifrunner.gnm1.ann1.H8VZ0K Arachis hypogaea HOM05D005357 ORTHO05D006354 1.1e-47 194.5 240 43.8
MD12G1159000 Malus domestica HOM05D005357 ORTHO05D006354 1.1e-47 194.5 226 47.8
vmacro01296 Vaccinium macrocarpon HOM05D005357 ORTHO05D006354 1.1e-47 194.5 218 47.2
MBI06_g17209_MAGBIO Magnolia biondii HOM05D005357 ORTHO05D006354 1.4e-47 194.1 190 51.1
Sc05g0000650 Simmondsia chinensis HOM05D005357 ORTHO05D006354 1.4e-47 194.1 195 49.7
PGSC0003DMG402020324 Solanum tuberosum HOM05D005357 ORTHO05D006354 1.4e-47 194.1 189 53.4
Lsat_1_v5_gn_5_155380 Lactuca sativa HOM05D005357 ORTHO05D006354 1.8e-47 193.7 237 46.4
TPR.G1557 Trifolium pratense HOM05D005357 ORTHO05D006354 1.8e-47 193.7 208 47.6
Glyma.18G195500 Glycine max HOM05D005357 ORTHO05D006354 2.4e-47 193.4 192 50.0
PSO585G0030 Papaver somniferum HOM05D005357 ORTHO05D006354 2.4e-47 193.4 231 45.9
Lj3g0024478 Lotus japonicus HOM05D005357 ORTHO05D006354 4.0e-47 192.6 252 44.4
MD04G1145200 Malus domestica HOM05D005357 ORTHO05D006354 5.2e-47 192.2 234 45.3
Medtr7g056183 Medicago truncatula HOM05D005357 ORTHO05D006354 5.2e-47 192.2 196 49.5
Medtr7g066710 Medicago truncatula HOM05D005357 ORTHO05D006354 5.2e-47 192.2 185 51.4
Os10g0494500 Oryza sativa ssp. japonica HOM05D005357 ORTHO05D006354 1.2e-46 191.0 240 43.8
Ca_09168_v3 Cicer arietinum L. HOM05D005357 ORTHO05D006354 1.5e-46 190.7 239 41.8
ECA248G2096 Erigeron canadensis HOM05D005357 ORTHO05D006354 3.4e-46 189.5 190 51.1
Phvul.008G108800 Phaseolus vulgaris HOM05D005357 ORTHO05D006354 4.4e-46 189.1 245 42.4
CDE03G0086 Ceratophyllum demersum HOM05D005357 ORTHO05D006354 5.8e-46 188.7 216 46.3
PGR031G1436 Punica granatum HOM05D005357 ORTHO05D006354 5.8e-46 188.7 277 40.1
Sopen09g006960 Solanum pennellii HOM05D005357 ORTHO05D006354 7.6e-46 188.3 250 43.2
Zm00001eb221140 Zea mays HOM05D005357 ORTHO05D006354 1.3e-45 187.6 227 44.9
CDE04G3126 Ceratophyllum demersum HOM05D005357 ORTHO05D006354 3.8e-45 186.0 213 46.9
A10p33610 Brassica napus HOM05D005357 ORTHO05D006354 4.9e-45 185.7 232 44.8
Sp6g40520 Schrenkiella parvula HOM05D005357 ORTHO05D006354 4.9e-45 185.7 244 43.4
BcaB05g21942 Brassica carinata HOM05D005357 ORTHO05D006354 6.4e-45 185.3 269 42.0
Thhalv10014073m.g Eutrema salsugineum HOM05D005357 ORTHO05D006354 6.4e-45 185.3 242 43.4
Zm00001eb044800 Zea mays HOM05D005357 ORTHO05D006354 6.4e-45 185.3 227 44.9
BraA10t45393Z Brassica rapa HOM05D005357 ORTHO05D006354 1.9e-44 183.7 218 45.0
AT5G01160 Arabidopsis thaliana HOM05D005357 ORTHO05D006354 3.2e-44 183.0 239 43.9
arahy.Tifrunner.gnm1.ann1.5ZZ6F4 Arachis hypogaea HOM05D005357 ORTHO05D006354 3.2e-44 183.0 259 40.5
Carub.0006s0073 Capsella rubella HOM05D005357 ORTHO05D006354 4.2e-44 182.6 241 43.2
Lalb_Chr01g0022881 Lupinus albus HOM05D005357 ORTHO05D006354 4.2e-44 182.6 194 47.9
CARHR211480 Cardamine hirsuta HOM05D005357 ORTHO05D006354 5.4e-44 182.2 242 43.8
Oeu030537.4 Olea europaea HOM05D005357 ORTHO05D006354 5.4e-44 182.2 190 47.4
BcaNung02762 Brassica carinata HOM05D005357 ORTHO05D006354 7.1e-44 181.8 255 42.7
Lalb_Chr03g0042941 Lupinus albus HOM05D005357 ORTHO05D006354 7.1e-44 181.8 161 53.4
AL6G11040 Arabidopsis lyrata HOM05D005357 ORTHO05D006354 1.2e-43 181.0 241 42.3
C09p74540 Brassica napus HOM05D005357 ORTHO05D006354 1.6e-43 180.6 234 44.9
BolC9t60186H Brassica oleracea HOM05D005357 ORTHO05D006354 1.6e-43 180.6 234 44.9
HanXRQChr13g0397571 Helianthus annuus HOM05D005357 ORTHO05D006354 1.6e-43 180.6 180 47.8
Gohir.D04G128100 Gossypium hirsutum HOM05D005357 ORTHO05D006354 2.1e-43 180.3 240 43.8
Aa31LG1G22800 Aethionema arabicum HOM05D005357 ORTHO05D006354 2.7e-43 179.9 233 43.3
HPP92_021066 Vanilla planifolia HOM05D005357 ORTHO05D006354 3.5e-43 179.5 204 46.6
Oeu044369.1 Olea europaea HOM05D005357 ORTHO05D006354 3.9e-42 176.0 289 38.8
HanXRQChr13g0397921 Helianthus annuus HOM05D005357 ORTHO05D006354 4.3e-41 172.6 214 43.0
BcaNung02766 Brassica carinata HOM05D005357 ORTHO05D006354 2.8e-40 169.9 233 42.9
SEGI_31043 Sequoiadendron giganteum HOM05D005357 ORTHO05D006354 3.6e-40 169.5 162 49.4
Eucgr.B02762 Eucalyptus grandis HOM05D005357 ORTHO05D006354 1.5e-38 164.1 253 41.9
unitig_22.g6590 Utricularia gibba HOM05D005357 ORTHO05D006354 2.4e-36 156.8 235 40.9
Pp3c20_10060 Physcomitrium patens HOM05D005357 ORTHO05D006354 4.3e-33 146.0 202 40.6
Pp3c23_4130 Physcomitrium patens HOM05D005357 ORTHO05D006354 2.8e-32 143.3 145 44.8
SHI12776 Sapria himalayana HOM05D005357 ORTHO05D006354 1.8e-31 140.6 149 49.7
Sabra06G0073400 Salix brachista HOM05D005357 ORTHO05D006354 2.2e-29 133.7 314 30.9
Mapoly0068s0057 Marchantia polymorpha HOM05D005357 ORTHO05D006354 5.4e-28 129.0 247 34.0
Pp3c8_18230 Physcomitrium patens HOM05D005357 ORTHO05D006354 6.0e-27 125.6 163 39.9
Dinv03649 Davidia involucrata HOM05D005357 ORTHO05D006354 6.7e-26 122.1 169 39.6
Psat3g131000 Pisum sativum HOM05D005357 ORTHO05D006354 1.1e-23 114.8 131 43.5
Atru.chr8.2134 Acer truncatum HOM05D005357 ORTHO05D006354 3.1e-23 113.2 86 58.1
CBR_g24154 Chara braunii HOM05D005357 ORTHO05D006354 5.3e-23 112.5 93 49.5
SEGI_08495 Sequoiadendron giganteum HOM05D054687 ORTHO05D006354 1.3e-21 107.8 83 54.2
Solyc09g013120.4 Solanum lycopersicum HOM05D005357 ORTHO05D006354 2.2e-13 80.5 158 36.1
CSS0020158 Camellia sinensis var. sinensis HOM05D005357 ORTHO05D006354 3.2e-12 76.6 137 36.5
ATR0605G041 Amborella trichopoda HOM05D005357 ORTHO05D006354 1.6e-11 74.3 152 31.6
PGSC0003DMG401020324 Solanum tuberosum HOM05D005357 ORTHO05D006354 1.6e-11 74.3 59 59.3
PGSC0003DMG400002411 Solanum tuberosum HOM05D005357 ORTHO05D006354 2.1e-11 73.9 134 34.3
Atru.chr8.2135 Acer truncatum HOM05D005357 ORTHO05D006354 2.7e-11 73.6 135 36.3
VMungo1383G1762 Vigna mungo HOM05D005357 ORTHO05D006354 2.5e-09 67.0 138 33.3
Hma1.2p1_0125F.1_g058510 Hydrangea macrophylla HOM05D005357 ORTHO05D006354 1.1e-07 61.6 135 32.6


User provided reference genes

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