Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_008312 Daucus carota HOM05D007758 ORTHO05D009788 1.3e-24 115.5 58 100.0
THA.LOC104814457 Tarenaya hassleriana HOM05D007758 ORTHO05D009788 4.1e-18 94.0 58 79.3
Lsat_1_v5_gn_6_90760 Lactuca sativa HOM05D007758 ORTHO05D009788 1.6e-17 92.0 60 80.0
Hma1.2p1_1673F.1_g296900 Hydrangea macrophylla HOM05D007758 ORTHO05D009788 2.0e-17 91.7 58 77.6
Migut.E00814 Erythranthe guttata HOM05D007758 ORTHO05D009788 2.7e-17 91.3 56 82.1
CSS0049692 Camellia sinensis var. sinensis HOM05D007758 ORTHO05D009788 1.0e-16 89.4 58 75.9
Oeu035101.1 Olea europaea HOM05D007758 ORTHO05D009788 1.7e-16 88.6 62 79.0
Hma1.2p1_0414F.1_g147490 Hydrangea macrophylla HOM05D007758 ORTHO05D009788 3.0e-16 87.8 52 82.7
Thecc.03G237200 Theobroma cacao HOM05D007758 ORTHO05D009788 3.0e-16 87.8 57 77.2
Nn1g00706 Nelumbo nucifera HOM05D007758 ORTHO05D009788 3.9e-16 87.4 54 79.6
CANSAT21G1691 Cannabis sativa HOM05D007758 ORTHO05D009788 6.6e-16 86.7 54 79.6
CiPaw.12G057000 Carya illinoinensis HOM05D007758 ORTHO05D009788 6.6e-16 86.7 60 76.7
Manes.15G171100 Manihot esculenta HOM05D007758 ORTHO05D009788 6.6e-16 86.7 58 75.9
C07p48590 Brassica napus HOM05D007758 ORTHO05D009788 1.9e-15 85.1 58 74.1
BolC7t45367H Brassica oleracea HOM05D007758 ORTHO05D009788 1.9e-15 85.1 58 74.1
Ca_28157_v3 Cicer arietinum L. HOM05D007758 ORTHO05D009788 1.9e-15 85.1 58 74.1
GSVIVG01013273001 Vitis vinifera HOM05D007758 ORTHO05D009788 1.9e-15 85.1 56 75.0
AL7G37620 Arabidopsis lyrata HOM05D007758 ORTHO05D009788 3.3e-15 84.3 58 74.1
Peaxi162Scf00715g00026 Petunia axillaris HOM05D007758 ORTHO05D009788 3.3e-15 84.3 60 75.0
ClCG09G012550 Citrullus lanatus HOM05D007758 ORTHO05D009788 5.6e-15 83.6 55 72.7
CSS0001994 Camellia sinensis var. sinensis HOM05D007758 ORTHO05D009788 7.3e-15 83.2 45 86.7
PGR042G0139 Punica granatum HOM05D007758 ORTHO05D009788 7.3e-15 83.2 59 72.9
Thhalv10026742m.g Eutrema salsugineum HOM05D007758 ORTHO05D009788 9.5e-15 82.8 58 72.4
Lalb_Chr09g0329711 Lupinus albus HOM05D007758 ORTHO05D009788 9.5e-15 82.8 57 70.2
BraA08t33271Z Brassica rapa HOM05D007758 ORTHO05D009788 1.2e-14 82.4 58 72.4
Prupe.5G051100 Prunus persica HOM05D007758 ORTHO05D009788 1.2e-14 82.4 54 77.8
Sed0000899 Sechium edule HOM05D007758 ORTHO05D009788 1.2e-14 82.4 53 71.7
A03p50300 Brassica napus HOM05D007758 ORTHO05D009788 1.6e-14 82.0 58 72.4
BraA03t14119Z Brassica rapa HOM05D007758 ORTHO05D009788 1.6e-14 82.0 58 72.4
Ca_22029_v3 Cicer arietinum L. HOM05D007758 ORTHO05D009788 1.6e-14 82.0 58 74.1
MELO3C003346.2 Cucumis melo HOM05D007758 ORTHO05D009788 1.6e-14 82.0 57 70.2
CsaV3_3G049700 Cucumis sativus L. HOM05D007758 ORTHO05D009788 1.6e-14 82.0 61 73.8
TAR629G0116 Trochodendron aralioides HOM05D007758 ORTHO05D009788 1.6e-14 82.0 53 73.6
Carub.0007s2429 Capsella rubella HOM05D007758 ORTHO05D009788 2.8e-14 81.3 58 72.4
CiPaw.09G190000 Carya illinoinensis HOM05D007758 ORTHO05D009788 2.8e-14 81.3 60 73.3
Glyma.05G067900 Glycine max HOM05D007758 ORTHO05D009788 2.8e-14 81.3 60 70.0
Phvul.003G226800 Phaseolus vulgaris HOM05D007758 ORTHO05D009788 2.8e-14 81.3 60 70.0
TWI60G0956 Tripterygium wilfordii HOM05D007758 ORTHO05D009788 2.8e-14 81.3 55 69.1
Oeu017314.1 Olea europaea HOM05D007758 ORTHO05D009788 3.6e-14 80.9 62 79.0
Gohir.D09G192200 Gossypium hirsutum HOM05D007758 ORTHO05D009788 4.7e-14 80.5 61 70.5
Gorai.006G215000 Gossypium raimondii HOM05D007758 ORTHO05D009788 4.7e-14 80.5 61 70.5
TAR633G2270 Trochodendron aralioides HOM05D007758 ORTHO05D009788 4.7e-14 80.5 58 69.0
arahy.Tifrunner.gnm1.ann1.24R365 Arachis hypogaea HOM05D007758 ORTHO05D009788 6.2e-14 80.1 52 73.1
arahy.Tifrunner.gnm1.ann1.EY31BM Arachis hypogaea HOM05D007758 ORTHO05D009788 6.2e-14 80.1 52 73.1
COL.COLO4_06700 Corchorus olitorius HOM05D007758 ORTHO05D009788 6.2e-14 80.1 51 74.5
Gohir.A09G197600 Gossypium hirsutum HOM05D007758 ORTHO05D009788 6.2e-14 80.1 48 81.2
AT4G17085 Arabidopsis thaliana HOM05D007758 ORTHO05D009788 8.1e-14 79.7 58 70.7
Cc08_g01520 Coffea canephora HOM05D007758 ORTHO05D009788 8.1e-14 79.7 59 72.9
Lj4g0024059 Lotus japonicus HOM05D007758 ORTHO05D009788 8.1e-14 79.7 51 72.5
CARHR223670 Cardamine hirsuta HOM05D007758 ORTHO05D009788 1.1e-13 79.3 58 70.7
Glyma.17G150000 Glycine max HOM05D007758 ORTHO05D009788 1.1e-13 79.3 58 65.5
RcHm_v2.0_Chr6g0259711 Rosa chinensis HOM05D007758 ORTHO05D009788 1.4e-13 79.0 58 70.7
PGSC0003DMG400001836 Solanum tuberosum HOM05D007758 ORTHO05D009788 1.4e-13 79.0 59 69.5
BcaB04g18382 Brassica carinata HOM05D007758 ORTHO05D009788 1.8e-13 78.6 59 71.2
CAN.G1445.11 Capsicum annuum HOM05D007758 ORTHO05D009788 1.8e-13 78.6 54 74.1
MD04G1056100 Malus domestica HOM05D007758 ORTHO05D009788 1.8e-13 78.6 57 71.9
BcaC07g38037 Brassica carinata HOM05D007758 ORTHO05D009788 2.3e-13 78.2 54 72.2
A08p12870 Brassica napus HOM05D007758 ORTHO05D009788 2.3e-13 78.2 54 72.2
BolC8t48433H Brassica oleracea HOM05D007758 ORTHO05D009788 2.3e-13 78.2 54 72.2
Cfa012357 Carpinus fangiana HOM05D007758 ORTHO05D009788 2.3e-13 78.2 57 66.7
Zm00001eb180740 Zea mays HOM05D007758 ORTHO05D009788 3.1e-13 77.8 50 70.0
TPR.G17254 Trifolium pratense HOM05D007758 ORTHO05D009788 4.0e-13 77.4 58 69.0
CiPaw.10G048600 Carya illinoinensis HOM05D007758 ORTHO05D009788 5.2e-13 77.0 60 70.0
FAN13G2273 Fragaria x ananassa HOM05D007758 ORTHO05D009788 6.8e-13 76.6 51 74.5
FAN18G3236 Fragaria x ananassa HOM05D007758 ORTHO05D009788 6.8e-13 76.6 51 74.5
BcaC06g33532 Brassica carinata HOM05D007758 ORTHO05D009788 8.9e-13 76.3 58 69.0
BcaNung04665 Brassica carinata HOM05D007758 ORTHO05D009788 8.9e-13 76.3 58 69.0
Ca_03905_v3 Cicer arietinum L. HOM05D000421 ORTHO05D009788 8.9e-13 76.3 46 80.4
Hund11300 Selenicereus undatus HOM05D007758 ORTHO05D009788 8.9e-13 76.3 52 71.2
CiPaw.14G095500 Carya illinoinensis HOM05D007758 ORTHO05D009788 1.2e-12 75.9 60 70.0
Medtr4g099120 Medicago truncatula HOM05D007758 ORTHO05D009788 1.2e-12 75.9 58 67.2
CiPaw.02G038300 Carya illinoinensis HOM05D007758 ORTHO05D009788 1.5e-12 75.5 60 70.0
Psat4g076760 Pisum sativum HOM05D007758 ORTHO05D009788 3.4e-12 74.3 46 76.1
Medtr3g053460 Medicago truncatula HOM05D007758 ORTHO05D009788 5.8e-12 73.6 58 65.5
Haze_08336 Corylus avellana HOM05D007758 ORTHO05D009788 7.5e-12 73.2 41 80.5
PSO782G2991 Papaver somniferum HOM05D007758 ORTHO05D009788 7.5e-12 73.2 48 70.8
CiPaw.14G095700 Carya illinoinensis HOM05D007758 ORTHO05D009788 1.3e-11 72.4 55 70.9
Potri.003G085400 Populus trichocarpa HOM05D007758 ORTHO05D009788 1.7e-11 72.0 75 54.7
Atru.chr9.1149 Acer truncatum HOM05D007758 ORTHO05D009788 1.9e-10 68.6 49 63.3
FAN08G1799 Fragaria x ananassa HOM05D007758 ORTHO05D009788 1.9e-10 68.6 51 72.5
Ciclev10023239m.g Citrus clementina HOM05D007758 ORTHO05D009788 3.2e-10 67.8 58 60.3
Nitab4.5_0010949g0010 Nicotiana tabacum HOM05D007758 ORTHO05D009788 1.2e-09 65.9 36 86.1
unitig_744.g24437 Utricularia gibba HOM05D007758 ORTHO05D009788 2.7e-09 64.7 87 48.3
RcHm_v2.0_Chr7g0205921 Rosa chinensis HOM05D007758 ORTHO05D009788 1.3e-08 62.4 61 59.0
BolC7t45365H Brassica oleracea HOM05D007758 ORTHO05D009788 5.1e-08 60.5 37 78.4
TWI81G0786 Tripterygium wilfordii HOM05D007758 ORTHO05D009788 3.6e-06 54.3 35 68.6


User provided reference genes

Program Settings