Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_008310 Daucus carota HOM05D006116 ORTHO05D007795 1.3e-225 786.2 443 100.0
vmacro00376 Vaccinium macrocarpon HOM05D006116 ORTHO05D007795 8.0e-162 574.3 461 65.7
Actinidia03408 Actinidia chinensis HOM05D006116 ORTHO05D007795 8.8e-161 570.9 457 64.6
Hma1.2p1_0414F.1_g147510 Hydrangea macrophylla HOM05D006116 ORTHO05D007795 4.4e-160 568.5 457 68.1
Nitab4.5_0001255g0040 Nicotiana tabacum HOM05D006116 ORTHO05D007795 5.7e-160 568.2 449 63.3
CSS0043999 Camellia sinensis var. sinensis HOM05D006116 ORTHO05D007795 1.3e-159 567.0 459 64.1
CSS0034154 Camellia sinensis var. sinensis HOM05D006116 ORTHO05D007795 2.8e-159 565.8 459 64.3
COL.COLO4_06703 Corchorus olitorius HOM05D006116 ORTHO05D007795 6.3e-159 564.7 457 63.7
Duzib205G0680 Durio zibethinus HOM05D006116 ORTHO05D007795 8.2e-159 564.3 453 69.3
PGSC0003DMG400001856 Solanum tuberosum HOM05D006116 ORTHO05D007795 2.4e-158 562.8 446 63.5
Rhsim11G0056500 Rhododendron simsii HOM05D006116 ORTHO05D007795 2.6e-157 559.3 459 63.0
CAN.G1445.8 Capsicum annuum HOM05D006116 ORTHO05D007795 4.5e-157 558.5 443 63.0
Nitab4.5_0006135g0020 Nicotiana tabacum HOM05D006116 ORTHO05D007795 4.5e-157 558.5 452 62.8
Sopen08g026090 Solanum pennellii HOM05D006116 ORTHO05D007795 1.7e-156 556.6 446 63.0
Ciclev10020221m.g Citrus clementina HOM05D006116 ORTHO05D007795 2.2e-156 556.2 457 61.5
Oeu020145.1 Olea europaea HOM05D006116 ORTHO05D007795 5.0e-156 555.1 456 63.4
GSVIVG01013271001 Vitis vinifera HOM05D006116 ORTHO05D007795 1.9e-155 553.1 462 67.1
Solyc08g077510.4 Solanum lycopersicum HOM05D006116 ORTHO05D007795 3.2e-155 552.4 446 62.8
FAN18G3779 Fragaria x ananassa HOM05D006116 ORTHO05D007795 1.4e-153 547.0 455 60.7
Thecc.03G237000 Theobroma cacao HOM05D006116 ORTHO05D007795 4.0e-153 545.4 458 67.2
Prupe.5G050800 Prunus persica HOM05D006116 ORTHO05D007795 6.8e-153 544.7 456 61.0
FvH4_5g20810 Fragaria vesca HOM05D006116 ORTHO05D007795 9.7e-152 540.8 457 60.2
Cc08_g01540 Coffea canephora HOM05D006116 ORTHO05D007795 2.8e-151 539.3 469 63.5
FAN08G3374 Fragaria x ananassa HOM05D006116 ORTHO05D007795 4.8e-151 538.5 453 60.3
CiPaw.11G085600 Carya illinoinensis HOM05D006116 ORTHO05D007795 8.3e-151 537.7 458 66.2
ClCG10G002040 Citrullus lanatus HOM05D006116 ORTHO05D007795 8.3e-151 537.7 454 65.2
QL12p007972 Quercus lobata HOM05D006116 ORTHO05D007795 2.4e-150 536.2 480 62.3
ECA240G2524 Erigeron canadensis HOM05D006116 ORTHO05D007795 3.1e-150 535.8 459 60.1
Gorai.008G230000 Gossypium raimondii HOM05D006116 ORTHO05D007795 9.1e-150 534.3 458 62.2
HanXRQChr03g0087311 Helianthus annuus HOM05D006116 ORTHO05D007795 9.1e-150 534.3 458 60.5
Gohir.A12G211900 Gossypium hirsutum HOM05D006116 ORTHO05D007795 1.2e-149 533.9 458 62.0
FAN04G0705 Fragaria x ananassa HOM05D006116 ORTHO05D007795 2.0e-149 533.1 453 59.4
Peaxi162Scf00084g00117 Petunia axillaris HOM05D006116 ORTHO05D007795 2.7e-149 532.7 450 62.2
Aqoxy7G00869 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 5.9e-149 531.6 446 70.4
MD04G1057000 Malus domestica HOM05D006116 ORTHO05D007795 1.0e-148 530.8 461 59.9
CsaV3_3G002130 Cucumis sativus L. HOM05D006116 ORTHO05D007795 2.2e-148 529.6 457 64.3
PGR042G3339 Punica granatum HOM05D006116 ORTHO05D007795 1.9e-147 526.6 470 57.9
THA.LOC104813328 Tarenaya hassleriana HOM05D006116 ORTHO05D007795 5.5e-147 525.0 447 59.7
CANSAT21G1244 Cannabis sativa HOM05D006116 ORTHO05D007795 1.2e-146 523.9 460 63.7
MELO3C013885.2 Cucumis melo HOM05D006116 ORTHO05D007795 1.6e-146 523.5 457 63.2
Potri.003G085600 Populus trichocarpa HOM05D006116 ORTHO05D007795 2.1e-146 523.1 456 63.8
TWI60G0034 Tripterygium wilfordii HOM05D006116 ORTHO05D007795 2.1e-146 523.1 453 66.4
Lalb_Chr05g0220761 Lupinus albus HOM05D006116 ORTHO05D007795 4.7e-146 521.9 446 59.2
Medtr4g099100 Medicago truncatula HOM05D006116 ORTHO05D007795 1.8e-145 520.0 459 58.8
Lj4g0012718 Lotus japonicus HOM05D006116 ORTHO05D007795 3.0e-145 519.2 446 60.5
Ca_22031_v3 Cicer arietinum L. HOM05D006116 ORTHO05D007795 4.0e-145 518.8 447 62.9
Lj8A287G22 Lonicera japonica HOM05D006116 ORTHO05D007795 8.8e-145 517.7 307 79.8
arahy.Tifrunner.gnm1.ann1.F87Z6X Arachis hypogaea HOM05D006116 ORTHO05D007795 1.2e-144 517.3 476 58.0
RcHm_v2.0_Chr7g0207741 Rosa chinensis HOM05D006116 ORTHO05D007795 3.4e-144 515.8 461 61.8
Glyma.17G150200 Glycine max HOM05D006116 ORTHO05D007795 4.4e-144 515.4 445 60.2
Nn1g00701 Nelumbo nucifera HOM05D006116 ORTHO05D007795 5.7e-144 515.0 458 64.2
arahy.Tifrunner.gnm1.ann1.L13TYF Arachis hypogaea HOM05D006116 ORTHO05D007795 7.5e-144 514.6 459 59.3
Eucgr.E00329 Eucalyptus grandis HOM05D006116 ORTHO05D007795 7.5e-144 514.6 468 60.9
VMungo0251G0386 Vigna mungo HOM05D006116 ORTHO05D007795 1.3e-143 513.8 454 64.1
BolC7t45369H Brassica oleracea HOM05D006116 ORTHO05D007795 3.7e-143 512.3 458 58.5
Migut.E00901 Erythranthe guttata HOM05D006116 ORTHO05D007795 8.3e-143 511.1 302 79.5
A03p50320 Brassica napus HOM05D006116 ORTHO05D007795 1.1e-142 510.8 455 62.4
TPR.G11192 Trifolium pratense HOM05D006116 ORTHO05D007795 3.1e-142 509.2 449 63.5
C07p48610 Brassica napus HOM05D006116 ORTHO05D007795 5.4e-142 508.4 458 58.1
BraA03t14121Z Brassica rapa HOM05D006116 ORTHO05D007795 9.1e-142 507.7 453 62.3
Gohir.D12G214400 Gossypium hirsutum HOM05D006116 ORTHO05D007795 7.7e-141 504.6 301 79.1
MSTRG.1960 Avicennia marina HOM05D006116 ORTHO05D007795 2.3e-140 503.1 445 63.1
Lsat_1_v5_gn_6_88480 Lactuca sativa HOM05D006116 ORTHO05D007795 2.9e-140 502.7 464 58.4
CARHR223700 Cardamine hirsuta HOM05D006116 ORTHO05D007795 6.6e-140 501.5 461 61.0
Phvul.003G227000 Phaseolus vulgaris HOM05D006116 ORTHO05D007795 8.6e-140 501.1 460 57.0
SGA_v2.0_scaffold20G09247 Striga asiatica HOM05D006116 ORTHO05D007795 4.7e-138 495.4 494 55.3
ClCG00G004790 Citrullus lanatus HOM05D006116 ORTHO05D007795 5.7e-136 488.4 454 61.5
AL7G37600 Arabidopsis lyrata HOM05D006116 ORTHO05D007795 1.7e-135 486.9 458 60.0
PSO732G0356 Papaver somniferum HOM05D006116 ORTHO05D007795 1.7e-135 486.9 442 56.6
Sp7g17070 Schrenkiella parvula HOM05D006116 ORTHO05D007795 2.2e-135 486.5 442 66.1
Aa31LG2G13210 Aethionema arabicum HOM05D006116 ORTHO05D007795 6.3e-135 485.0 429 60.1
Sed0023369 Sechium edule HOM05D006116 ORTHO05D007795 1.4e-134 483.8 448 67.6
Thhalv10025290m.g Eutrema salsugineum HOM05D006116 ORTHO05D007795 4.1e-134 482.3 444 64.6
Os04g0542900 Oryza sativa ssp. japonica HOM05D006116 ORTHO05D007795 4.1e-134 482.3 487 60.0
PSO675G1792 Papaver somniferum HOM05D006116 ORTHO05D007795 9.2e-134 481.1 452 58.8
unitig_21.g20374 Utricularia gibba HOM05D006116 ORTHO05D007795 7.8e-133 478.0 447 56.4
Carub.0007s2428 Capsella rubella HOM05D006116 ORTHO05D007795 1.0e-132 477.6 300 73.7
Hund14464 Selenicereus undatus HOM05D006116 ORTHO05D007795 1.3e-132 477.2 467 54.0
Zm00001eb075030 Zea mays HOM05D006116 ORTHO05D007795 1.3e-132 477.2 494 55.3
Lalb_Chr09g0329681 Lupinus albus HOM05D006116 ORTHO05D007795 1.7e-132 476.9 305 72.8
Sc07g0009020 Simmondsia chinensis HOM05D006116 ORTHO05D007795 2.9e-132 476.1 464 55.6
Ah.12g053810 Amaranthus hybridus HOM05D006116 ORTHO05D007795 8.6e-132 474.6 455 53.8
ATR0829G115 Amborella trichopoda HOM05D006116 ORTHO05D007795 3.2e-126 456.1 451 55.2
AUR62018802 Chenopodium quinoa HOM05D006116 ORTHO05D007795 2.3e-124 449.9 419 57.5
Manes.17G019700 Manihot esculenta HOM05D006116 ORTHO05D007795 2.3e-124 449.9 443 53.7
AUR62007200 Chenopodium quinoa HOM05D006116 ORTHO05D007795 6.6e-124 448.4 300 67.3
EL10Ac5g12218 Beta vulgaris HOM05D006116 ORTHO05D007795 3.6e-122 442.6 518 48.6
TAR375G0725 Trochodendron aralioides HOM05D006116 ORTHO05D007795 2.9e-119 433.0 399 63.7
SEGI_40490 Sequoiadendron giganteum HOM05D006116 ORTHO05D007795 4.6e-117 425.6 295 67.8
HPP92_020688 Vanilla planifolia HOM05D006116 ORTHO05D007795 3.1e-113 412.9 464 51.3
TAR375G0708 Trochodendron aralioides HOM05D006116 ORTHO05D007795 9.9e-112 407.9 388 62.4
Mapoly0141s0023 Marchantia polymorpha HOM05D006116 ORTHO05D007795 3.5e-109 399.4 302 63.6
Pp3c14_16100 Physcomitrium patens HOM05D006116 ORTHO05D007795 8.6e-108 394.8 301 61.1
Pp3c14_16101 Physcomitrium patens HOM05D006116 ORTHO05D007795 8.6e-108 394.8 301 61.1
Pp3c2_10960 Physcomitrium patens HOM05D006116 ORTHO05D007795 3.1e-105 386.3 301 62.1
CiPaw.12G058000 Carya illinoinensis HOM05D006116 ORTHO05D007795 6.8e-105 385.2 230 79.1
AagrBONN_evm.TU.Sc2ySwM_368.518 Anthoceros agrestis HOM05D006116 ORTHO05D007795 1.2e-104 384.4 453 46.1
Zm00001eb313880 Zea mays HOM05D006116 ORTHO05D007795 5.8e-104 382.1 269 66.2
Migut.E00812 Erythranthe guttata HOM05D006116 ORTHO05D007795 6.4e-103 378.6 219 80.8
SMO356G0030 Selaginella moellendorffii HOM05D006116 ORTHO05D007795 5.1e-100 369.0 303 58.1
Psat4g077320 Pisum sativum HOM05D006116 ORTHO05D007795 1.9e-99 367.1 370 54.9
Zm00001eb091650 Zea mays HOM05D006116 ORTHO05D007795 9.6e-99 364.8 309 57.3
BcaC06g33529 Brassica carinata HOM05D006116 ORTHO05D007795 2.4e-97 360.1 373 58.4
Haze_08334 Corylus avellana HOM05D006116 ORTHO05D007795 6.4e-95 352.1 360 58.9
FAN13G0371 Fragaria x ananassa HOM05D006116 ORTHO05D007795 1.4e-94 350.9 352 53.1
Zm00001eb319310 Zea mays HOM05D006116 ORTHO05D007795 1.6e-85 320.9 203 74.9
Zm00001eb129530 Zea mays HOM05D006116 ORTHO05D007795 1.5e-72 277.7 208 62.5
Zm00001eb391960 Zea mays HOM05D006116 ORTHO05D007795 1.5e-72 277.7 208 62.5
CBR_g27781 Chara braunii HOM05D006116 ORTHO05D007795 1.9e-70 270.8 267 49.4
Cre14.g631900 Chlamydomonas reinhardtii HOM05D006116 ORTHO05D007795 2.8e-66 256.9 278 43.2
Dinv28896 Davidia involucrata HOM05D006116 ORTHO05D007795 2.2e-63 247.3 191 64.4
Atru.chr9.1147 Acer truncatum HOM05D006116 ORTHO05D007795 1.9e-54 217.6 120 80.8
Zm00001eb268110 Zea mays HOM05D006116 ORTHO05D007795 6.3e-50 202.6 193 51.3
PSO732G0385 Papaver somniferum HOM05D006116 ORTHO05D007795 1.1e-41 175.3 275 42.5
Zm00001eb276710 Zea mays HOM05D006116 ORTHO05D007795 2.2e-39 167.5 134 57.5
Ca_20974_v3 Cicer arietinum L. HOM05D006116 ORTHO05D007795 3.1e-33 147.1 121 59.5
TAR375G0859 Trochodendron aralioides HOM05D006116 ORTHO05D007795 6.1e-29 132.9 70 87.1
EL10Ac5g12217 Beta vulgaris HOM05D006116 ORTHO05D007795 6.8e-28 129.4 76 71.1
Lsat_1_v5_gn_7_9401 Lactuca sativa HOM05D006116 ORTHO05D000290 8.8e-28 129.0 101 58.4
DCAR_005654 Daucus carota HOM05D006116 ORTHO05D007795 7.0e-25 119.4 68 82.4
CAN.G507.3 Capsicum annuum HOM05D006116 ORTHO05D007795 6.8e-20 102.8 74 62.2
CDE11G0087 Ceratophyllum demersum HOM05D006116 ORTHO05D007795 2.4e-17 94.4 53 79.2
TAR375G0706 Trochodendron aralioides HOM05D006116 ORTHO05D009946 4.3e-14 83.6 58 62.1
Aqoxy6G01690 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 1.4e-09 68.6 120 29.2
Aqoxy7G03532 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 1.1e-06 58.9 59 42.4
BolC8t48435H Brassica oleracea HOM05D006116 ORTHO05D007795 3.3e-06 57.4 41 58.5


User provided reference genes

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