Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_008300 Daucus carota HOM05D006197 ORTHO05D007718 7.5e-52 206.8 99 100.0
Nitab4.5_0006693g0020 Nicotiana tabacum HOM05D006197 ORTHO05D007718 8.3e-35 150.2 103 74.8
PGSC0003DMG400024214 Solanum tuberosum HOM05D006197 ORTHO05D007718 1.8e-34 149.1 103 71.8
Hma1.2p1_0311F.1_g121310 Hydrangea macrophylla HOM05D006197 ORTHO05D007718 3.1e-34 148.3 101 72.3
Sopen05g026900 Solanum pennellii HOM05D006197 ORTHO05D007718 3.1e-34 148.3 103 70.9
Sopen08g025860 Solanum pennellii HOM05D006197 ORTHO05D007718 3.1e-34 148.3 103 70.9
Nitab4.5_0002055g0120 Nicotiana tabacum HOM05D006197 ORTHO05D007718 5.4e-34 147.5 103 72.8
GSVIVG01013230001 Vitis vinifera HOM05D006197 ORTHO05D007718 1.2e-33 146.4 99 69.7
Solyc08g077280.1 Solanum lycopersicum HOM05D006197 ORTHO05D007718 1.6e-33 146.0 103 69.9
Dinv28915 Davidia involucrata HOM05D006197 ORTHO05D007718 4.5e-33 144.4 104 69.2
Peaxi162Scf00084g00099 Petunia axillaris HOM05D006197 ORTHO05D007718 2.5e-31 138.7 96 72.9
CSS0031892 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 9.5e-31 136.7 107 69.2
CSS0033989 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 9.5e-31 136.7 107 69.2
CSS0037645 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 9.5e-31 136.7 107 69.2
Lsat_1_v5_gn_6_66400 Lactuca sativa HOM05D006197 ORTHO05D007718 1.6e-30 136.0 111 64.9
FAN04G1051 Fragaria x ananassa HOM05D006197 ORTHO05D007718 3.6e-30 134.8 100 68.0
Sed0004723 Sechium edule HOM05D006197 ORTHO05D007718 3.6e-30 134.8 102 67.6
Haze_08298 Corylus avellana HOM05D006197 ORTHO05D007718 1.0e-29 133.3 100 68.0
Sed0016057 Sechium edule HOM05D006197 ORTHO05D007718 1.0e-29 133.3 99 67.7
MD16G1269400 Malus domestica HOM05D006197 ORTHO05D007718 1.4e-29 132.9 99 65.7
ECA240G0414 Erigeron canadensis HOM05D006197 ORTHO05D007718 1.8e-29 132.5 106 65.1
Rhsim11G0011100 Rhododendron simsii HOM05D006197 ORTHO05D007718 2.3e-29 132.1 103 68.0
Potri.001G146700 Populus trichocarpa HOM05D006197 ORTHO05D007718 3.0e-29 131.7 100 64.0
Cc08_g01810 Coffea canephora HOM05D006197 ORTHO05D007718 5.2e-29 131.0 103 68.0
FAN18G0540 Fragaria x ananassa HOM05D006197 ORTHO05D007718 5.2e-29 131.0 100 69.0
MBI11_g07528_MAGBIO Magnolia biondii HOM05D006197 ORTHO05D007718 5.2e-29 131.0 104 61.5
Cc00_g23310 Coffea canephora HOM05D006197 ORTHO05D007718 6.8e-29 130.6 103 67.0
HanXRQChr08g0234831 Helianthus annuus HOM05D006197 ORTHO05D007718 6.8e-29 130.6 107 63.6
FAN13G1034 Fragaria x ananassa HOM05D006197 ORTHO05D007718 8.9e-29 130.2 97 67.0
Cc00_g26570 Coffea canephora HOM05D006197 ORTHO05D007718 1.2e-28 129.8 103 65.0
COL.COLO4_17110 Corchorus olitorius HOM05D006197 ORTHO05D007718 1.2e-28 129.8 99 65.7
Prupe.5G046200 Prunus persica HOM05D006197 ORTHO05D007718 1.5e-28 129.4 100 69.0
CiPaw.11G087500 Carya illinoinensis HOM05D006197 ORTHO05D007718 2.6e-28 128.6 103 65.0
Nn1g03717 Nelumbo nucifera HOM05D006197 ORTHO05D007718 2.6e-28 128.6 98 65.3
FAN08G0099 Fragaria x ananassa HOM05D006197 ORTHO05D007718 3.4e-28 128.3 99 65.7
Cfa012386 Carpinus fangiana HOM05D006197 ORTHO05D007718 4.4e-28 127.9 100 68.0
Cc00_g30230 Coffea canephora HOM05D006197 ORTHO05D007718 4.4e-28 127.9 103 67.0
CsaV3_3G049530 Cucumis sativus L. HOM05D006197 ORTHO05D007718 5.7e-28 127.5 102 59.8
MBI02_g29718_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D009071 7.5e-28 127.1 100 62.0
Manes.15G173000 Manihot esculenta HOM05D006197 ORTHO05D007718 7.5e-28 127.1 99 62.6
Duzib205G0278 Durio zibethinus HOM05D006197 ORTHO05D007718 1.7e-27 125.9 99 66.7
Gohir.D08G180000 Gossypium hirsutum HOM05D006197 ORTHO05D007718 1.7e-27 125.9 99 65.7
Gorai.004G188500 Gossypium raimondii HOM05D006197 ORTHO05D007718 1.7e-27 125.9 99 65.7
PGR042G3581 Punica granatum HOM05D006197 ORTHO05D007718 1.7e-27 125.9 100 63.0
arahy.Tifrunner.gnm1.ann1.M9L3KI Arachis hypogaea HOM05D006197 ORTHO05D007718 2.2e-27 125.6 106 62.3
arahy.Tifrunner.gnm1.ann1.PC0NS4 Arachis hypogaea HOM05D006197 ORTHO05D007718 2.2e-27 125.6 106 62.3
Duzib068G0126 Durio zibethinus HOM05D006197 ORTHO05D007718 2.9e-27 125.2 99 64.6
Gohir.A04G000300 Gossypium hirsutum HOM05D006197 ORTHO05D007718 2.9e-27 125.2 99 65.7
Ciclev10033154m.g Citrus clementina HOM05D006197 ORTHO05D007718 3.7e-27 124.8 105 64.8
AL5G41940 Arabidopsis lyrata HOM05D006197 ORTHO05D007718 4.9e-27 124.4 101 64.4
AT3G59840 Arabidopsis thaliana HOM05D006197 ORTHO05D007718 4.9e-27 124.4 101 64.4
Carub.0005s2656 Capsella rubella HOM05D006197 ORTHO05D007718 4.9e-27 124.4 101 64.4
Cpa.g.sc6.409 Carica papaya HOM05D006197 ORTHO05D007718 4.9e-27 124.4 99 63.6
Actinidia03393 Actinidia chinensis HOM05D004955 ORTHO05D005965 6.4e-27 124.0 90 67.8
Thecc.03G234100 Theobroma cacao HOM05D006197 ORTHO05D007718 6.4e-27 124.0 99 64.6
Aa31LG10G14080 Aethionema arabicum HOM05D006197 ORTHO05D007718 8.3e-27 123.6 101 61.4
Dinv25183 Davidia involucrata HOM05D002285 ORTHO05D009255 8.3e-27 123.6 106 60.4
QL12p007107 Quercus lobata HOM05D006197 ORTHO05D007718 8.3e-27 123.6 105 63.8
THA.LOC104819961 Tarenaya hassleriana HOM05D006197 ORTHO05D007718 8.3e-27 123.6 103 61.2
Ca_24632_v3 Cicer arietinum L. HOM05D006197 ORTHO05D007718 1.1e-26 123.2 103 61.2
VMungo1215G1228 Vigna mungo HOM05D006197 ORTHO05D007718 1.1e-26 123.2 105 61.9
Gohir.A08G159600 Gossypium hirsutum HOM05D006197 ORTHO05D007718 1.4e-26 122.9 99 64.6
SalBow1G7863 Salvia bowleyana HOM05D006197 ORTHO05D007718 1.4e-26 122.9 104 63.5
AUR62018769 Chenopodium quinoa HOM05D006197 ORTHO05D007718 1.8e-26 122.5 102 66.7
Migut.N01790 Erythranthe guttata HOM05D006197 ORTHO05D007718 1.8e-26 122.5 106 62.3
Sabra01G0115400 Salix brachista HOM05D006197 ORTHO05D007718 1.8e-26 122.5 100 61.0
TWI81G0993 Tripterygium wilfordii HOM05D006197 ORTHO05D007718 1.8e-26 122.5 102 62.7
TAR624G0346 Trochodendron aralioides HOM05D006197 ORTHO05D007718 1.8e-26 122.5 99 63.6
Atru.chr6.1773 Acer truncatum HOM05D006197 ORTHO05D007718 3.2e-26 121.7 100 62.0
Eucgr.E00313 Eucalyptus grandis HOM05D006197 ORTHO05D007718 4.1e-26 121.3 104 60.6
Oeu006551.1 Olea europaea HOM05D006197 ORTHO05D007718 4.1e-26 121.3 106 59.4
MELO3C003373.2 Cucumis melo HOM05D006197 ORTHO05D007718 7.0e-26 120.6 102 59.8
Glyma.11G041000 Glycine max HOM05D006197 ORTHO05D007718 7.0e-26 120.6 100 62.0
Ah.12g053650 Amaranthus hybridus HOM05D006197 ORTHO05D007718 1.2e-25 119.8 99 63.6
AUR62007231 Chenopodium quinoa HOM05D006197 ORTHO05D007718 1.2e-25 119.8 102 64.7
Aqoxy1G03814 Aquilegia oxysepala HOM05D006197 ORTHO05D007718 1.6e-25 119.4 103 59.2
BcaC08g45013 Brassica carinata HOM05D006197 ORTHO05D007718 1.6e-25 119.4 99 61.6
BolC6t37808H Brassica oleracea HOM05D006197 ORTHO05D007718 1.6e-25 119.4 99 61.6
RcHm_v2.0_Chr7g0208331 Rosa chinensis HOM05D006197 ORTHO05D007718 1.6e-25 119.4 99 61.6
Gorai.008G229000 Gossypium raimondii HOM05D006197 ORTHO05D007718 2.0e-25 119.0 99 61.6
Phvul.002G004500 Phaseolus vulgaris HOM05D006197 ORTHO05D007718 2.0e-25 119.0 103 60.2
Lj2g0021118 Lotus japonicus HOM05D006197 ORTHO05D007718 2.7e-25 118.6 102 61.8
BcaB02g07441 Brassica carinata HOM05D006197 ORTHO05D007718 3.5e-25 118.2 101 60.4
C06p26450 Brassica napus HOM05D006197 ORTHO05D007718 3.5e-25 118.2 99 60.6
Lalb_Chr09g0323941 Lupinus albus HOM05D006197 ORTHO05D007718 4.6e-25 117.9 118 55.1
VMungo1215G3393 Vigna mungo HOM05D006197 ORTHO05D007718 4.6e-25 117.9 106 62.3
Thhalv10006335m.g Eutrema salsugineum HOM05D006197 ORTHO05D007718 5.9e-25 117.5 101 61.4
Medtr5g013975 Medicago truncatula HOM05D006197 ORTHO05D007718 5.9e-25 117.5 107 60.7
Oeu014592.2 Olea europaea HOM05D006197 ORTHO05D007718 5.9e-25 117.5 103 57.3
CARHR170180 Cardamine hirsuta HOM05D006197 ORTHO05D007718 1.0e-24 116.7 99 60.6
A07p24860 Brassica napus HOM05D006197 ORTHO05D007718 1.3e-24 116.3 101 61.4
BraA07t30130Z Brassica rapa HOM05D006197 ORTHO05D007718 1.3e-24 116.3 101 61.4
EL10Ac5g12195 Beta vulgaris HOM05D006197 ORTHO05D007718 1.7e-24 115.9 99 61.6
CANSAT64G2368 Cannabis sativa HOM05D006197 ORTHO05D007718 1.7e-24 115.9 114 55.3
Gohir.D12G213400 Gossypium hirsutum HOM05D006197 ORTHO05D007718 1.7e-24 115.9 99 59.6
Glyma.01G201200 Glycine max HOM05D006197 ORTHO05D007718 2.3e-24 115.5 106 60.4
BcaC07g40556 Brassica carinata HOM05D006197 ORTHO05D007718 3.0e-24 115.2 99 60.6
A09p52120 Brassica napus HOM05D006197 ORTHO05D007718 3.0e-24 115.2 99 60.6
Cc00_g31810 Coffea canephora HOM05D006197 ORTHO05D007718 3.0e-24 115.2 91 65.9
Sp5g03300 Schrenkiella parvula HOM05D006197 ORTHO05D007718 5.0e-24 114.4 101 60.4
unitig_747.g21291 Utricularia gibba HOM05D006197 ORTHO05D007718 5.0e-24 114.4 103 57.3
BcaC07g40434 Brassica carinata HOM05D006197 ORTHO05D007718 1.1e-23 113.2 104 59.6
Psat2g174760 Pisum sativum HOM05D006197 ORTHO05D007718 9.5e-23 110.2 105 56.2
PSO210G4997 Papaver somniferum HOM05D006197 ORTHO05D007718 1.6e-22 109.4 101 60.4
PSO832G1675 Papaver somniferum HOM05D006197 ORTHO05D007718 1.6e-22 109.4 101 60.4
TWI15G0656 Tripterygium wilfordii HOM05D006197 ORTHO05D007718 2.8e-22 108.6 106 60.4
Sc01g0007760 Simmondsia chinensis HOM05D006197 ORTHO05D007718 6.2e-22 107.5 64 79.7
Cc08_g02050 Coffea canephora HOM05D006197 ORTHO05D007718 2.3e-21 105.5 85 65.9
Cc08_g01990 Coffea canephora HOM05D006197 ORTHO05D007718 3.1e-21 105.1 67 76.1
Phvul.002G003700 Phaseolus vulgaris HOM05D006197 ORTHO05D007718 1.5e-20 102.8 103 54.4
BolC8t51081H Brassica oleracea HOM05D000403 ORTHO05D004426 1.7e-19 99.4 65 72.3
TPR.G6747 Trifolium pratense HOM05D006197 ORTHO05D007718 2.9e-19 98.6 63 77.8
Cc08_g01910 Coffea canephora HOM05D006197 ORTHO05D007718 3.7e-19 98.2 100 54.0
Os05g0500450 Oryza sativa ssp. japonica HOM05D006197 ORTHO05D007718 2.4e-18 95.5 100 51.0
ATR1088G052 Amborella trichopoda HOM05D006197 ORTHO05D007718 4.1e-18 94.7 109 45.9
Duzib084G1370 Durio zibethinus HOM05D006197 ORTHO05D007718 4.1e-18 94.7 99 53.5
CAN.G799.18 Capsicum annuum HOM05D006197 ORTHO05D007718 9.5e-15 83.6 55 76.4
AagrBONN_evm.TU.Sc2ySwM_368.296 Anthoceros agrestis HOM05D006197 ORTHO05D007718 1.2e-14 83.2 80 51.2
CBR_g8168 Chara braunii HOM05D006197 ORTHO05D007718 2.1e-14 82.4 119 42.9
Mapoly0127s0016 Marchantia polymorpha HOM05D006197 ORTHO05D007718 2.1e-14 82.4 51 66.7
Nn1g08520 Nelumbo nucifera HOM05D006197 ORTHO05D007718 1.1e-13 80.1 94 48.9
Mapoly0046s0110 Marchantia polymorpha HOM05D006197 ORTHO05D007718 4.0e-13 78.2 70 57.1
Eucgr.C01972 Eucalyptus grandis HOM05D006197 ORTHO05D007718 6.8e-13 77.4 70 54.3
Pp3c14_9970 Physcomitrium patens HOM05D006197 ORTHO05D007718 6.8e-13 77.4 89 49.4
SMO119G0374 Selaginella moellendorffii HOM05D006197 ORTHO05D007718 3.2e-10 68.6 87 44.8
Migut.E01526 Erythranthe guttata HOM05D006197 ORTHO05D007718 1.0e-08 63.5 72 50.0
Migut.E01523 Erythranthe guttata HOM05D006197 ORTHO05D007718 2.3e-08 62.4 133 33.8
Cc08_g01940 Coffea canephora HOM05D000011 ORTHO05D000157 3.0e-08 62.0 32 78.1
CDE05G1960 Ceratophyllum demersum HOM05D006197 ORTHO05D007718 5.6e-07 57.8 66 50.0


User provided reference genes

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