Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_008274 Daucus carota HOM05D004120 ORTHO05D004951 5.0e-210 734.2 372 100.0
Hma1.2p1_0585F.1_g183700 Hydrangea macrophylla HOM05D004120 ORTHO05D004951 2.1e-163 579.3 374 79.1
Dinv28953 Davidia involucrata HOM05D004120 ORTHO05D004951 3.0e-162 575.5 369 79.1
Sopen08g001030 Solanum pennellii HOM05D004120 ORTHO05D004951 3.4e-158 562.0 373 76.9
PGSC0003DMG402001159 Solanum tuberosum HOM05D004120 ORTHO05D004951 2.2e-157 559.3 373 76.9
CSS0046330 Camellia sinensis var. sinensis HOM05D004120 ORTHO05D004951 2.5e-156 555.8 367 77.9
GSVIVG01013166001 Vitis vinifera HOM05D004120 ORTHO05D004951 1.2e-155 553.5 369 77.0
MD00G1220600 Malus domestica HOM05D004120 ORTHO05D004951 1.1e-153 547.0 371 76.3
Dinv25212 Davidia involucrata HOM05D004120 ORTHO05D004951 1.3e-152 543.5 378 75.7
Lsat_1_v5_gn_6_79560 Lactuca sativa HOM05D004120 ORTHO05D004951 4.8e-152 541.6 381 73.8
TAR629G2715 Trochodendron aralioides HOM05D004120 ORTHO05D004951 6.3e-152 541.2 374 75.7
CAN.G1216.15 Capsicum annuum HOM05D004120 ORTHO05D004951 5.3e-151 538.1 377 74.3
Cc08_g02620 Coffea canephora HOM05D004120 ORTHO05D004951 2.6e-150 535.8 382 72.5
Rhsim11G0014500 Rhododendron simsii HOM05D004120 ORTHO05D004951 1.0e-149 533.9 376 73.4
Nn6g33597 Nelumbo nucifera HOM05D004120 ORTHO05D004951 1.3e-149 533.5 386 73.1
CiPaw.11G092700 Carya illinoinensis HOM05D004120 ORTHO05D004951 1.4e-148 530.0 364 75.3
arahy.Tifrunner.gnm1.ann1.482M5A Arachis hypogaea HOM05D004120 ORTHO05D004951 4.2e-148 528.5 372 74.5
arahy.Tifrunner.gnm1.ann1.G7H05W Arachis hypogaea HOM05D004120 ORTHO05D004951 4.2e-148 528.5 372 74.5
ECA240G4620 Erigeron canadensis HOM05D004120 ORTHO05D004951 1.2e-147 526.9 379 73.1
Cfa012429 Carpinus fangiana HOM05D004120 ORTHO05D004951 1.6e-147 526.6 372 73.1
HanXRQChr03g0084021 Helianthus annuus HOM05D004120 ORTHO05D004951 1.6e-147 526.6 384 71.4
AUR62018721 Chenopodium quinoa HOM05D004120 ORTHO05D004951 2.1e-147 526.2 375 72.8
Eucgr.D02191 Eucalyptus grandis HOM05D004120 ORTHO05D004951 2.7e-147 525.8 323 82.0
vmacro00332 Vaccinium macrocarpon HOM05D004120 ORTHO05D004951 2.7e-147 525.8 432 66.2
CANSAT21G2618 Cannabis sativa HOM05D004120 ORTHO05D004951 6.1e-147 524.6 366 74.3
Nn1g00518 Nelumbo nucifera HOM05D004120 ORTHO05D004951 1.8e-146 523.1 375 73.3
EL10Ac5g12129 Beta vulgaris HOM05D004120 ORTHO05D004951 2.3e-146 522.7 370 72.7
PGR031G2717 Punica granatum HOM05D004120 ORTHO05D004951 5.1e-146 521.5 341 79.2
CiPaw.12G063200 Carya illinoinensis HOM05D004120 ORTHO05D004951 8.8e-146 520.8 348 77.9
Migut.E00930 Erythranthe guttata HOM05D004120 ORTHO05D004951 1.5e-145 520.0 365 73.4
MSTRG.13757 Avicennia marina HOM05D004120 ORTHO05D004951 2.0e-145 519.6 373 71.6
Oeu053047.1 Olea europaea HOM05D004120 ORTHO05D004951 2.0e-145 519.6 379 70.2
Manes.17G013200 Manihot esculenta HOM05D004120 ORTHO05D004951 2.6e-145 519.2 349 75.9
Sed0006792 Sechium edule HOM05D004120 ORTHO05D004951 3.3e-145 518.8 376 73.4
MELO3C013859.2 Cucumis melo HOM05D004120 ORTHO05D004951 4.4e-145 518.5 373 72.9
CsaV3_3G001840 Cucumis sativus L. HOM05D004120 ORTHO05D004951 5.7e-145 518.1 373 73.5
Phvul.002G007300 Phaseolus vulgaris HOM05D004120 ORTHO05D004951 5.7e-145 518.1 373 72.9
Oeu028027.1 Olea europaea HOM05D004120 ORTHO05D004951 1.3e-144 516.9 374 72.2
Prupe.5G038500 Prunus persica HOM05D004120 ORTHO05D004951 1.3e-144 516.9 371 73.3
VMungo1215G0016 Vigna mungo HOM05D004120 ORTHO05D004951 3.7e-144 515.4 373 72.9
ClCG10G001730 Citrullus lanatus HOM05D004120 ORTHO05D004951 1.1e-143 513.8 374 73.0
Ciclev10031866m.g Citrus clementina HOM05D004120 ORTHO05D004951 1.8e-143 513.1 310 82.9
Potri.001G143400 Populus trichocarpa HOM05D004120 ORTHO05D004951 2.4e-143 512.7 381 71.9
Cpa.g.sc239.7 Carica papaya HOM05D004120 ORTHO05D004951 4.1e-143 511.9 379 71.2
QL12p005624 Quercus lobata HOM05D004120 ORTHO05D004951 9.1e-143 510.8 331 79.5
Gohir.D08G177300 Gossypium hirsutum HOM05D004120 ORTHO05D004951 4.5e-142 508.4 374 71.9
Lalb_Chr16g0379111 Lupinus albus HOM05D004120 ORTHO05D004951 4.5e-142 508.4 374 71.1
Glyma.11G043400 Glycine max HOM05D004120 ORTHO05D004951 7.7e-142 507.7 365 73.7
FvH4_5g21880 Fragaria vesca HOM05D004120 ORTHO05D004951 1.0e-141 507.3 368 71.5
FAN04G1856 Fragaria x ananassa HOM05D004120 ORTHO05D004951 1.0e-141 507.3 368 71.7
TWI81G0459 Tripterygium wilfordii HOM05D004120 ORTHO05D004951 1.3e-141 506.9 378 70.9
FAN18G3415 Fragaria x ananassa HOM05D004120 ORTHO05D004951 1.7e-141 506.5 368 71.5
Ca_24652_v3 Cicer arietinum L. HOM05D004120 ORTHO05D004951 2.2e-141 506.1 330 78.5
COL.COLO4_17048 Corchorus olitorius HOM05D004120 ORTHO05D004951 5.0e-141 505.0 299 83.6
Lalb_Chr05g0213941 Lupinus albus HOM05D004120 ORTHO05D004951 2.5e-140 502.7 349 73.4
Duzib084G1060 Durio zibethinus HOM05D004120 ORTHO05D004951 3.2e-140 502.3 370 71.1
RcHm_v2.0_Chr7g0209431 Rosa chinensis HOM05D004120 ORTHO05D004951 4.2e-140 501.9 369 71.0
Hund14402 Selenicereus undatus HOM05D004120 ORTHO05D004951 5.5e-140 501.5 380 70.3
Gohir.A08G156900 Gossypium hirsutum HOM05D004120 ORTHO05D004951 2.7e-139 499.2 372 71.2
Lj2g0014948 Lotus japonicus HOM05D004120 ORTHO05D004951 4.7e-139 498.4 325 78.8
Sabra01G0111800 Salix brachista HOM05D004120 ORTHO05D004951 4.7e-139 498.4 404 66.1
Thecc.03G228600 Theobroma cacao HOM05D004120 ORTHO05D004951 4.7e-139 498.4 373 70.8
Aqoxy3G02384 Aquilegia oxysepala HOM05D004120 ORTHO05D004951 1.8e-138 496.5 378 68.0
Gorai.004G185700 Gossypium raimondii HOM05D004120 ORTHO05D004951 1.8e-138 496.5 391 68.3
Medtr5g014430 Medicago truncatula HOM05D004120 ORTHO05D004951 1.8e-138 496.5 334 78.1
Peaxi162Scf00045g00028 Petunia axillaris HOM05D004120 ORTHO05D004951 2.3e-138 496.1 379 69.1
CDE03G0015 Ceratophyllum demersum HOM05D004120 ORTHO05D004951 6.7e-138 494.6 369 69.4
TPR.G7833 Trifolium pratense HOM05D004120 ORTHO05D004951 1.1e-137 493.8 324 79.6
Sc01g0007480 Simmondsia chinensis HOM05D004120 ORTHO05D004951 3.3e-137 492.3 334 76.0
unitig_52.g17209 Utricularia gibba HOM05D004120 ORTHO05D004951 4.4e-137 491.9 302 81.1
unitig_699.g19781 Utricularia gibba HOM05D004120 ORTHO05D004951 2.8e-136 489.2 368 70.1
Ah.12g054990 Amaranthus hybridus HOM05D004120 ORTHO05D004951 3.7e-136 488.8 371 69.3
AL4G31300 Arabidopsis lyrata HOM05D004120 ORTHO05D004951 4.8e-136 488.4 372 68.0
Carub.0004s1696 Capsella rubella HOM05D004120 ORTHO05D004951 2.4e-135 486.1 389 64.8
CARHR129420 Cardamine hirsuta HOM05D004120 ORTHO05D004951 1.2e-134 483.8 374 67.6
Thhalv10016805m.g Eutrema salsugineum HOM05D004120 ORTHO05D004951 1.6e-134 483.4 384 65.6
AUR62007285 Chenopodium quinoa HOM05D004120 ORTHO05D004951 5.9e-134 481.5 369 68.8
Sp4g17480 Schrenkiella parvula HOM05D004120 ORTHO05D004951 2.2e-133 479.6 391 65.2
BcaC02g11630 Brassica carinata HOM05D004120 ORTHO05D004951 5.0e-133 478.4 378 66.7
C04p12920 Brassica napus HOM05D004120 ORTHO05D004951 5.0e-133 478.4 378 66.7
THA.LOC104807951 Tarenaya hassleriana HOM05D004120 ORTHO05D004951 5.0e-133 478.4 355 69.9
BolC4t22936H Brassica oleracea HOM05D004120 ORTHO05D004951 8.5e-133 477.6 375 65.9
PSO782G3668 Papaver somniferum HOM05D004120 ORTHO05D004951 8.5e-133 477.6 346 71.4
BraA03t11203Z Brassica rapa HOM05D004120 ORTHO05D004951 1.1e-132 477.2 375 66.4
ATR0049G040 Amborella trichopoda HOM05D004120 ORTHO05D004951 1.5e-132 476.9 378 65.6
Solyc08g005010.4 Solanum lycopersicum HOM05D004120 ORTHO05D004951 1.5e-132 476.9 329 75.4
A03p19500 Brassica napus HOM05D004120 ORTHO05D004951 2.5e-132 476.1 375 66.1
PSO063G1634 Papaver somniferum HOM05D004120 ORTHO05D004951 3.2e-132 475.7 372 68.5
BraA05t19989Z Brassica rapa HOM05D004120 ORTHO05D004951 1.2e-131 473.8 373 66.2
BcaB02g09465 Brassica carinata HOM05D004120 ORTHO05D004951 1.6e-131 473.4 377 65.5
AT2G35260 Arabidopsis thaliana HOM05D004120 ORTHO05D004951 2.1e-131 473.0 381 64.6
C03p22720 Brassica napus HOM05D004120 ORTHO05D004951 3.6e-131 472.2 377 65.8
A05p10510 Brassica napus HOM05D004120 ORTHO05D004951 8.0e-131 471.1 373 65.7
SGA_v2.0_scaffold54G19447 Striga asiatica HOM05D004120 ORTHO05D004951 2.3e-130 469.5 430 57.9
BcaC01g05734 Brassica carinata HOM05D004120 ORTHO05D004951 8.8e-130 467.6 377 65.3
HPP92_022140 Vanilla planifolia HOM05D004120 ORTHO05D004951 2.0e-129 466.5 297 76.8
Thhalv10025287m.g Eutrema salsugineum HOM05D004120 ORTHO05D004951 3.3e-129 465.7 404 61.4
BolC3t14671H Brassica oleracea HOM05D004120 ORTHO05D004951 4.4e-129 465.3 377 65.0
HPP92_022143 Vanilla planifolia HOM05D004120 ORTHO05D004951 6.3e-128 461.5 347 68.6
AL716U10010 Arabidopsis lyrata HOM05D004120 ORTHO05D004951 1.1e-127 460.7 372 65.9
Os03g0100030 Oryza sativa ssp. japonica HOM05D004120 ORTHO05D004951 1.1e-127 460.7 279 78.5
Zm00001eb426630 Zea mays HOM05D004120 ORTHO05D004951 1.1e-127 460.7 334 69.2
Aa31LG6G560 Aethionema arabicum HOM05D004120 ORTHO05D004951 4.1e-127 458.8 277 79.8
C07p49190 Brassica napus HOM05D004120 ORTHO05D004951 4.1e-127 458.8 367 65.7
THA.LOC104798329 Tarenaya hassleriana HOM05D004120 ORTHO05D004951 4.1e-127 458.8 367 66.5
Carub.0007s2352 Capsella rubella HOM05D004120 ORTHO05D004951 7.0e-127 458.0 393 60.6
ECA246G0968 Erigeron canadensis HOM05D004120 ORTHO05D004951 7.0e-127 458.0 316 74.1
AL7G36690 Arabidopsis lyrata HOM05D004120 ORTHO05D004951 1.2e-126 457.2 419 58.5
Psat2g173200 Pisum sativum HOM05D004120 ORTHO05D004951 1.3e-125 453.8 330 73.0
Sp7g16270 Schrenkiella parvula HOM05D004120 ORTHO05D004951 1.3e-125 453.8 387 61.5
A01p09890 Brassica napus HOM05D004120 ORTHO05D004951 2.9e-125 452.6 383 63.2
CARHR224560 Cardamine hirsuta HOM05D004120 ORTHO05D004951 3.8e-125 452.2 277 78.0
AT4G17840 Arabidopsis thaliana HOM05D004120 ORTHO05D004951 5.0e-125 451.8 417 58.3
BcaNung00052 Brassica carinata HOM05D004120 ORTHO05D004951 1.9e-124 449.9 276 78.3
BraA01t00933Z Brassica rapa HOM05D004120 ORTHO05D004951 2.5e-124 449.5 362 65.7
A03p50800 Brassica napus HOM05D004120 ORTHO05D004951 3.2e-124 449.1 278 77.7
BraA03t14169Z Brassica rapa HOM05D004120 ORTHO05D004951 3.2e-124 449.1 278 77.7
BcaC09g51598 Brassica carinata HOM05D004120 ORTHO05D004951 7.2e-124 448.0 384 63.3
BolC1t01127H Brassica oleracea HOM05D004120 ORTHO05D004951 7.2e-124 448.0 384 63.3
C01p11590 Brassica napus HOM05D004120 ORTHO05D004951 4.7e-123 445.3 362 65.2
Glyma.01G198500 Glycine max HOM05D004120 ORTHO05D004951 3.4e-121 439.1 331 71.3
Aa31LG9G15290 Aethionema arabicum HOM05D004120 ORTHO05D004951 2.0e-118 429.9 425 56.9
BolC7t45429H Brassica oleracea HOM05D004120 ORTHO05D004951 6.8e-114 414.8 336 66.1
SEGI_24472 Sequoiadendron giganteum HOM05D004120 ORTHO05D004951 2.0e-110 403.3 333 62.8
Atru.chr6.1717 Acer truncatum HOM05D004120 ORTHO05D004951 4.5e-110 402.1 310 70.6
MD06G1033000 Malus domestica HOM05D004120 ORTHO05D004951 1.5e-108 397.1 264 77.3
Nitab4.5_0000804g0170 Nicotiana tabacum HOM05D004120 ORTHO05D004951 4.1e-103 379.0 213 87.8
Haze_08240 Corylus avellana HOM05D004120 ORTHO05D004951 2.3e-101 373.2 335 62.7
Duzib205G1837 Durio zibethinus HOM05D004120 ORTHO05D004951 3.4e-97 359.4 295 66.4
Actinidia28172 Actinidia chinensis HOM05D004120 ORTHO05D004951 2.1e-91 340.1 190 90.5
Mapoly0008s0099 Marchantia polymorpha HOM05D004120 ORTHO05D004951 4.7e-91 339.0 338 50.9
FAN13G1981 Fragaria x ananassa HOM05D004120 ORTHO05D004951 5.2e-90 335.5 270 66.7
FAN08G2335 Fragaria x ananassa HOM05D004120 ORTHO05D004951 1.2e-89 334.3 270 66.7
unitig_744.g24311 Utricularia gibba HOM05D004120 ORTHO05D004951 4.1e-87 325.9 308 59.1
Pp3c10_10980 Physcomitrium patens HOM05D004120 ORTHO05D004951 1.2e-86 324.3 322 52.5
Pp3c14_25270 Physcomitrium patens HOM05D004120 ORTHO05D004951 3.5e-86 322.8 327 52.9
Nitab4.5_0002539g0020 Nicotiana tabacum HOM05D004120 ORTHO05D004951 6.0e-86 322.0 273 66.3
Actinidia25961 Actinidia chinensis HOM05D004120 ORTHO05D004951 5.1e-85 318.9 254 67.3
SMO356G0344 Selaginella moellendorffii HOM05D004120 ORTHO05D004951 1.1e-71 274.6 255 51.0
CDE06G0385 Ceratophyllum demersum HOM05D004120 ORTHO05D004951 3.5e-70 269.6 235 60.9
arahy.Tifrunner.gnm1.ann1.K2V32T Arachis hypogaea HOM05D004120 ORTHO05D004951 9.3e-63 245.0 179 70.9
arahy.Tifrunner.gnm1.ann1.7CR4HZ Arachis hypogaea HOM05D004120 ORTHO05D004951 3.5e-62 243.0 180 70.6
arahy.Tifrunner.gnm1.ann1.WRTU1C Arachis hypogaea HOM05D004120 ORTHO05D004951 8.7e-61 238.4 180 69.4
HanXRQChr05g0153901 Helianthus annuus HOM05D004120 ORTHO05D004951 3.3e-60 236.5 162 76.5
arahy.Tifrunner.gnm1.ann1.3C7WBJ Arachis hypogaea HOM05D004120 ORTHO05D004951 7.4e-60 235.3 135 86.7
arahy.Tifrunner.gnm1.ann1.B3D4NA Arachis hypogaea HOM05D004120 ORTHO05D004951 4.8e-43 179.5 115 77.4
arahy.Tifrunner.gnm1.ann1.4R7L3N Arachis hypogaea HOM05D004120 ORTHO05D004951 1.1e-42 178.3 103 84.5
arahy.Tifrunner.gnm1.ann1.AE9Z3E Arachis hypogaea HOM05D004120 ORTHO05D004951 4.1e-42 176.4 119 73.9
AagrBONN_evm.TU.Sc2ySwM_117.2801 Anthoceros agrestis HOM05D010715 ORTHO05D004951 4.5e-41 172.9 157 56.1
arahy.Tifrunner.gnm1.ann1.RCE8PR Arachis hypogaea HOM05D004120 ORTHO05D004951 2.2e-35 154.1 132 65.2
arahy.Tifrunner.gnm1.ann1.E125G1 Arachis hypogaea HOM05D004120 ORTHO05D004951 5.0e-32 142.9 78 84.6
arahy.Tifrunner.gnm1.ann1.BQ9W36 Arachis hypogaea HOM05D004120 ORTHO05D004951 9.4e-31 138.7 77 83.1
arahy.Tifrunner.gnm1.ann1.U1DJ88 Arachis hypogaea HOM05D004120 ORTHO05D007788 7.9e-30 135.6 79 82.3
Aa31sc618G30 Aethionema arabicum HOM05D004120 ORTHO05D004951 1.8e-29 134.4 98 69.4
AagrBONN_evm.TU.Sc2ySwM_117.3803 Anthoceros agrestis HOM05D004120 ORTHO05D004951 2.8e-27 127.1 161 44.1
arahy.Tifrunner.gnm1.ann1.L0EJKI Arachis hypogaea HOM05D004120 ORTHO05D004951 1.1e-26 125.2 62 90.3
CBR_g56906 Chara braunii HOM05D004120 ORTHO05D004951 2.4e-26 124.0 114 48.2
arahy.Tifrunner.gnm1.ann1.H82JQN Arachis hypogaea HOM05D004120 ORTHO05D021518 1.7e-24 117.9 88 68.2
RcHm_v2.0_Chr6g0284251 Rosa chinensis HOM05D004120 ORTHO05D004951 1.1e-23 115.2 72 73.6
EL10Ac1g01819 Beta vulgaris HOM05D004120 ORTHO05D023811 3.9e-21 106.7 69 76.8
arahy.Tifrunner.gnm1.ann1.JI8VIY Arachis hypogaea HOM05D004120 ORTHO05D021518 7.4e-20 102.4 57 91.2
CBR_g19263 Chara braunii HOM05D004120 ORTHO05D004951 4.8e-19 99.8 141 40.4
arahy.Tifrunner.gnm1.ann1.NR0HVE Arachis hypogaea HOM05D004120 ORTHO05D021518 2.4e-18 97.4 57 89.5
AUR62039713 Chenopodium quinoa HOM05D004317 ORTHO05D005031 2.6e-17 94.0 55 80.0
CAN.G36.13 Capsicum annuum HOM05D004120 ORTHO05D004951 1.1e-15 88.6 53 75.5
CAN.G399.4 Capsicum annuum HOM05D004120 ORTHO05D004951 1.0e-13 82.0 55 76.4
Aa31sc185G30 Aethionema arabicum HOM05D004120 ORTHO05D004951 9.4e-07 58.9 169 31.4
A01p32880 Brassica napus HOM05D004120 ORTHO05D023811 1.6e-06 58.2 28 92.9
A06p35780 Brassica napus HOM05D004120 ORTHO05D023811 1.6e-06 58.2 28 92.9
BraA01t03409Z Brassica rapa HOM05D004120 ORTHO05D023811 1.6e-06 58.2 28 92.9
BraA06t26504Z Brassica rapa HOM05D004120 ORTHO05D033838 6.1e-06 56.2 29 86.2


User provided reference genes

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