Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_008226 Daucus carota HOM05D006137 ORTHO05D007697 4.5e-172 607.8 307 100.0
Dinv25255 Davidia involucrata HOM05D006137 ORTHO05D007697 3.7e-134 481.9 301 79.4
TAR629G2895 Trochodendron aralioides HOM05D006137 ORTHO05D007697 2.1e-129 466.1 301 75.4
CSS0021967 Camellia sinensis var. sinensis HOM05D006137 ORTHO05D007697 4.7e-129 464.9 305 74.4
CSS0050317 Camellia sinensis var. sinensis HOM05D006137 ORTHO05D007697 8.0e-129 464.2 304 74.7
Hma1.2p1_1027F.1_g249480 Hydrangea macrophylla HOM05D006137 ORTHO05D007697 6.8e-128 461.1 300 76.3
HanXRQChr04g0098961 Helianthus annuus HOM05D006137 ORTHO05D007697 2.9e-126 455.7 299 73.2
Nn3g19394 Nelumbo nucifera HOM05D006137 ORTHO05D007697 1.9e-125 453.0 301 74.1
Gohir.D12G208800 Gossypium hirsutum HOM05D006137 ORTHO05D007697 2.0e-124 449.5 306 73.5
Gorai.008G224300 Gossypium raimondii HOM05D006137 ORTHO05D007697 3.5e-124 448.7 306 73.9
RcHm_v2.0_Chr7g0211741 Rosa chinensis HOM05D006137 ORTHO05D007697 6.0e-124 448.0 301 73.4
TWI15G1160 Tripterygium wilfordii HOM05D006137 ORTHO05D007697 6.0e-124 448.0 298 74.5
FAN08G1929 Fragaria x ananassa HOM05D006137 ORTHO05D007697 3.9e-123 445.3 301 73.1
ECA233G6209 Erigeron canadensis HOM05D006137 ORTHO05D007697 6.6e-123 444.5 298 70.1
FAN18G2668 Fragaria x ananassa HOM05D006137 ORTHO05D007697 8.6e-123 444.1 302 72.5
Gohir.A12G206400 Gossypium hirsutum HOM05D006137 ORTHO05D007697 1.1e-122 443.7 303 73.3
FvH4_5g23010 Fragaria vesca HOM05D006137 ORTHO05D007697 2.5e-122 442.6 301 72.4
Duzib068G1414 Durio zibethinus HOM05D006137 ORTHO05D007697 3.3e-122 442.2 309 72.5
FAN04G0555 Fragaria x ananassa HOM05D006137 ORTHO05D007697 3.3e-122 442.2 301 72.4
CiPaw.11G098100 Carya illinoinensis HOM05D006137 ORTHO05D007697 7.3e-122 441.0 303 72.3
Ciclev10001458m.g Citrus clementina HOM05D006137 ORTHO05D007697 7.3e-122 441.0 299 71.6
FvH4_2g06760 Fragaria vesca HOM05D006137 ORTHO05D007697 1.6e-121 439.9 301 72.4
Atru.chr6.1520 Acer truncatum HOM05D006137 ORTHO05D007697 8.1e-121 437.6 302 71.9
MD06G1026400 Malus domestica HOM05D006137 ORTHO05D007697 8.1e-121 437.6 301 70.8
Thecc.03G309800 Theobroma cacao HOM05D006137 ORTHO05D007697 8.1e-121 437.6 298 73.8
GSVIVG01013108001 Vitis vinifera HOM05D006137 ORTHO05D007697 1.1e-120 437.2 304 70.4
FAN13G2862 Fragaria x ananassa HOM05D006137 ORTHO05D007697 3.1e-120 435.6 318 69.5
Medtr5g029550 Medicago truncatula HOM05D006137 ORTHO05D007697 1.2e-119 433.7 298 70.5
TPR.G19427 Trifolium pratense HOM05D006137 ORTHO05D007697 1.2e-119 433.7 297 69.7
COL.COLO4_16947 Corchorus olitorius HOM05D006137 ORTHO05D007697 1.5e-119 433.3 297 72.1
Lj3g0008594 Lotus japonicus HOM05D006137 ORTHO05D007697 1.5e-119 433.3 301 69.4
Peaxi162Scf00170g00615 Petunia axillaris HOM05D006137 ORTHO05D007697 2.0e-119 433.0 301 71.4
MELO3C013825.2 Cucumis melo HOM05D006137 ORTHO05D007697 2.6e-119 432.6 298 70.5
Aqoxy2G03876 Aquilegia oxysepala HOM05D006137 ORTHO05D007697 4.4e-119 431.8 302 69.2
CsaV3_3G001380 Cucumis sativus L. HOM05D006137 ORTHO05D007697 1.3e-118 430.3 298 69.8
Sabra03G0065200 Salix brachista HOM05D006137 ORTHO05D007697 1.7e-118 429.9 300 70.7
Potri.003G096600 Populus trichocarpa HOM05D006137 ORTHO05D007697 2.9e-118 429.1 298 71.5
Oeu017078.1 Olea europaea HOM05D006137 ORTHO05D007697 4.9e-118 428.3 303 70.0
PGR042G0393 Punica granatum HOM05D006137 ORTHO05D007697 6.4e-118 427.9 301 69.8
Cc08_g03270 Coffea canephora HOM05D006137 ORTHO05D007697 8.3e-118 427.6 301 69.1
Solyc08g076410.4 Solanum lycopersicum HOM05D006137 ORTHO05D007697 8.3e-118 427.6 301 70.8
Sopen08g024990 Solanum pennellii HOM05D006137 ORTHO05D007697 8.3e-118 427.6 301 70.8
PGSC0003DMG400014792 Solanum tuberosum HOM05D006137 ORTHO05D007697 1.9e-117 426.4 301 70.8
Nitab4.5_0002190g0020 Nicotiana tabacum HOM05D006137 ORTHO05D007697 2.4e-117 426.0 301 70.8
VMungo1215G0535 Vigna mungo HOM05D006137 ORTHO05D007697 3.2e-117 425.6 298 68.8
arahy.Tifrunner.gnm1.ann1.3JZK2J Arachis hypogaea HOM05D006137 ORTHO05D007697 4.1e-117 425.2 301 69.4
arahy.Tifrunner.gnm1.ann1.J91B8N Arachis hypogaea HOM05D006137 ORTHO05D007697 4.1e-117 425.2 301 69.4
FAN18G2637 Fragaria x ananassa HOM05D006137 ORTHO05D007697 5.4e-117 424.9 336 64.9
Lalb_Chr09g0325501 Lupinus albus HOM05D006137 ORTHO05D007697 1.2e-116 423.7 301 68.4
Rhsim11G0021000 Rhododendron simsii HOM05D006137 ORTHO05D007697 1.6e-116 423.3 317 68.1
CAN.G726.20 Capsicum annuum HOM05D006137 ORTHO05D007697 3.5e-116 422.2 305 68.9
EL10Ac2g03238 Beta vulgaris HOM05D006137 ORTHO05D007697 2.3e-115 419.5 307 68.7
Lsat_1_v5_gn_6_3681 Lactuca sativa HOM05D006137 ORTHO05D007697 2.3e-115 419.5 301 68.8
CANSAT21G0809 Cannabis sativa HOM05D006137 ORTHO05D007697 3.0e-115 419.1 302 67.5
Glyma.01G014900 Glycine max HOM05D006137 ORTHO05D007697 5.1e-115 418.3 298 68.5
Phvul.002G137400 Phaseolus vulgaris HOM05D006137 ORTHO05D007697 5.1e-115 418.3 298 66.8
Psat2g138120 Pisum sativum HOM05D006137 ORTHO05D007697 6.6e-115 417.9 299 68.2
CANSAT21G0548 Cannabis sativa HOM05D006137 ORTHO05D007697 8.6e-115 417.5 310 66.5
ClCG10G001310 Citrullus lanatus HOM05D006137 ORTHO05D007697 6.2e-113 411.4 361 59.3
PSO782G3150 Papaver somniferum HOM05D006137 ORTHO05D007697 4.0e-112 408.7 306 64.4
PSO063G4597 Papaver somniferum HOM05D006137 ORTHO05D007697 1.2e-111 407.1 305 64.9
Thhalv10016768m.g Eutrema salsugineum HOM05D006137 ORTHO05D007697 2.0e-111 406.4 298 67.8
AT2G35500 Arabidopsis thaliana HOM05D006137 ORTHO05D007697 5.8e-111 404.8 302 66.2
BcaB06g28845 Brassica carinata HOM05D006137 ORTHO05D007697 5.8e-111 404.8 298 67.1
AL4G31550 Arabidopsis lyrata HOM05D006137 ORTHO05D007697 7.6e-111 404.4 298 67.1
Sed0022354 Sechium edule HOM05D006137 ORTHO05D007697 7.6e-111 404.4 298 67.1
BcaC02g07708 Brassica carinata HOM05D006137 ORTHO05D007697 9.9e-111 404.1 300 67.0
A04p26930 Brassica napus HOM05D006137 ORTHO05D007697 1.7e-110 403.3 298 66.8
C04p64320 Brassica napus HOM05D006137 ORTHO05D007697 1.7e-110 403.3 298 66.8
Carub.0004s1719 Capsella rubella HOM05D006137 ORTHO05D007697 1.7e-110 403.3 298 66.8
CARHR129650 Cardamine hirsuta HOM05D006137 ORTHO05D007697 1.7e-110 403.3 298 67.1
MSTRG.24846 Avicennia marina HOM05D006137 ORTHO05D007697 2.2e-110 402.9 301 66.8
BraA04t18192Z Brassica rapa HOM05D006137 ORTHO05D007697 2.9e-110 402.5 298 66.8
BolC4t27919H Brassica oleracea HOM05D006137 ORTHO05D007697 2.4e-109 399.4 298 66.4
Nitab4.5_0003416g0030 Nicotiana tabacum HOM05D006137 ORTHO05D007697 7.1e-109 397.9 301 68.1
Sp4g17720 Schrenkiella parvula HOM05D006137 ORTHO05D007697 1.2e-108 397.1 298 65.8
Sc24g0002950 Simmondsia chinensis HOM05D006137 ORTHO05D007697 6.0e-108 394.8 272 72.1
vmacro08163 Vaccinium macrocarpon HOM05D006137 ORTHO05D007697 1.3e-107 393.7 274 71.2
CDE06G2536 Ceratophyllum demersum HOM05D006137 ORTHO05D007697 8.6e-107 391.0 320 60.6
Ah.09g233490 Amaranthus hybridus HOM05D006137 ORTHO05D007697 2.1e-105 386.3 301 65.4
Migut.A01172 Erythranthe guttata HOM05D006137 ORTHO05D007697 5.2e-104 381.7 304 66.1
FAN24G0436 Fragaria x ananassa HOM05D006137 ORTHO05D007697 7.6e-103 377.9 272 70.6
Os10g0577700 Oryza sativa ssp. japonica HOM05D006137 ORTHO05D007697 7.6e-103 377.9 302 58.6
THA.LOC104814417 Tarenaya hassleriana HOM05D006137 ORTHO05D007697 2.2e-102 376.3 300 63.3
QL12p001513 Quercus lobata HOM05D006137 ORTHO05D007697 3.8e-102 375.6 271 68.3
Prupe.5G028300 Prunus persica HOM05D006137 ORTHO05D007697 2.4e-101 372.9 301 63.5
Aa31LG9G15490 Aethionema arabicum HOM05D006137 ORTHO05D007697 4.2e-101 372.1 264 69.7
Eucgr.E00233 Eucalyptus grandis HOM05D006137 ORTHO05D007697 5.4e-101 371.7 293 63.8
unitig_748.g7545 Utricularia gibba HOM05D006137 ORTHO05D007697 9.3e-101 370.9 303 62.7
Lj2A232T29 Lonicera japonica HOM05D006137 ORTHO05D007697 2.3e-99 366.3 329 62.3
HPP92_014848 Vanilla planifolia HOM05D006137 ORTHO05D007697 3.0e-99 365.9 301 58.1
Zm00001eb025030 Zea mays HOM05D006137 ORTHO05D007697 1.3e-94 350.5 302 54.6
ATR0829G218 Amborella trichopoda HOM05D006137 ORTHO05D007697 2.2e-94 349.7 271 63.1
Oeu019613.1 Olea europaea HOM05D006137 ORTHO05D007697 3.8e-94 349.0 271 65.3
Oeu002327.1 Olea europaea HOM05D006137 ORTHO05D007697 1.0e-91 340.9 225 74.2
SGA_v2.0_scaffold36G14297 Striga asiatica HOM05D006137 ORTHO05D007697 1.5e-90 337.0 265 63.0
SEGI_14560 Sequoiadendron giganteum HOM05D006137 ORTHO05D007697 1.3e-89 334.0 293 56.7
Oeu019614.1 Olea europaea HOM05D006137 ORTHO05D007697 1.8e-88 330.1 271 63.1
FAN20G1935 Fragaria x ananassa HOM05D006137 ORTHO05D007697 4.0e-88 328.9 300 60.0
Mapoly0006s0263 Marchantia polymorpha HOM05D006137 ORTHO05D007697 7.4e-82 308.1 305 51.8
Eucgr.E00231 Eucalyptus grandis HOM05D006137 ORTHO05D007697 1.0e-78 297.7 267 59.2
Haze_08142 Corylus avellana HOM05D006137 ORTHO05D007697 3.8e-78 295.8 447 42.1
SMO228G0118 Selaginella moellendorffii HOM05D006137 ORTHO05D007697 3.0e-75 286.2 305 47.9
Pp3c12_17740 Physcomitrium patens HOM05D006137 ORTHO05D007697 7.6e-71 271.6 305 42.6
AagrBONN_evm.TU.Sc2ySwM_344.1996 Anthoceros agrestis HOM05D006137 ORTHO05D007697 7.2e-69 265.0 299 46.2
Manes.15G185701 Manihot esculenta HOM05D006137 ORTHO05D007697 3.6e-60 236.1 171 69.0
Ca_25185_v3 Cicer arietinum L. HOM05D006137 ORTHO05D007697 4.6e-60 235.7 172 66.9
AUR62002644 Chenopodium quinoa HOM05D006137 ORTHO05D007697 3.3e-58 229.6 144 77.8
Hund09822 Selenicereus undatus HOM05D006137 ORTHO05D007697 9.7e-58 228.0 148 74.3
Oeu033557.2 Olea europaea HOM05D006137 ORTHO05D007697 2.6e-47 193.4 148 63.5
C03p78000 Brassica napus HOM05D006137 ORTHO05D007697 5.0e-46 189.1 149 63.8
AUR62040998 Chenopodium quinoa HOM05D006137 ORTHO05D007697 6.7e-43 178.7 163 60.1
AUR62002645 Chenopodium quinoa HOM05D006137 ORTHO05D007697 2.6e-42 176.8 127 70.1
Hund09821 Selenicereus undatus HOM05D006137 ORTHO05D000006 1.6e-39 167.5 129 64.3
BolC1t02019H Brassica oleracea HOM05D006137 ORTHO05D007697 2.0e-39 167.2 160 56.2
BolC3t20061H Brassica oleracea HOM05D006137 ORTHO05D007697 6.1e-36 155.6 165 50.3
C01p20920 Brassica napus HOM05D006137 ORTHO05D007697 1.0e-35 154.8 165 51.5
CBR_g18978 Chara braunii HOM05D006137 ORTHO05D007697 3.7e-33 146.4 179 44.7
Glyma.07G152633 Glycine max HOM05D006137 ORTHO05D007697 1.1e-32 144.8 112 62.5
MCO11G470 Micromonas commoda HOM05D006137 ORTHO05D007697 2.7e-31 140.2 205 37.6
AUR62040999 Chenopodium quinoa HOM05D006137 ORTHO05D007697 3.6e-28 129.8 86 74.4
Medtr1g009450 Medicago truncatula HOM05D006137 ORTHO05D007697 8.3e-25 118.6 123 55.3
PRCOL_00002339 Prasinoderma coloniale HOM05D006137 ORTHO05D007697 9.2e-24 115.2 200 34.5
C02p41610 Brassica napus HOM05D006137 ORTHO05D007697 2.6e-10 70.5 36 83.3
BolC2t10179H Brassica oleracea HOM05D006137 ORTHO05D007697 2.6e-10 70.5 36 83.3
Cre16.g659850 Chlamydomonas reinhardtii HOM05D006137 ORTHO05D007697 4.9e-09 66.2 215 24.7
BcaC09g50780 Brassica carinata HOM05D006137 ORTHO05D007697 2.4e-08 63.9 97 43.3
BolC2t11174H Brassica oleracea HOM05D006137 ORTHO05D007697 5.4e-08 62.8 31 80.6
MCO12G135 Micromonas commoda HOM05D002058 ORTHO05D003758 5.4e-08 62.8 196 26.5


User provided reference genes

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