Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_008224 Daucus carota HOM05D007538 ORTHO05D009464 3.7e-191 671.4 344 100.0
Dinv25258 Davidia involucrata HOM05D007538 ORTHO05D009464 8.1e-53 211.8 354 42.7
FvH4_5g23080 Fragaria vesca HOM05D007538 ORTHO05D009464 1.5e-43 181.0 359 37.3
CSS0038946 Camellia sinensis var. sinensis HOM05D007538 ORTHO05D009464 2.6e-43 180.3 356 39.9
QL12p001632 Quercus lobata HOM05D007538 ORTHO05D009464 3.4e-43 179.9 362 37.6
CSS0028782 Camellia sinensis var. sinensis HOM05D007538 ORTHO05D009464 9.9e-43 178.3 354 39.5
FAN13G1023 Fragaria x ananassa HOM05D007538 ORTHO05D009464 3.7e-42 176.4 358 37.4
FAN08G1825 Fragaria x ananassa HOM05D007538 ORTHO05D009464 6.4e-42 175.6 355 36.6
Hma1.2p1_1569F.1_g291220 Hydrangea macrophylla HOM05D007538 ORTHO05D009464 1.2e-40 171.4 354 40.1
Thecc.03G310000 Theobroma cacao HOM05D007538 ORTHO05D009464 1.6e-40 171.0 347 36.3
CiPaw.12G068100 Carya illinoinensis HOM05D007538 ORTHO05D009464 3.5e-40 169.9 358 36.9
Cfa012515 Carpinus fangiana HOM05D007538 ORTHO05D009464 1.3e-39 167.9 358 38.3
MD06G1026300 Malus domestica HOM05D007538 ORTHO05D009464 1.9e-38 164.1 349 37.0
Ciclev10001787m.g Citrus clementina HOM05D007538 ORTHO05D009464 2.5e-38 163.7 373 35.7
FAN18G3589 Fragaria x ananassa HOM05D007538 ORTHO05D009464 2.5e-38 163.7 348 35.6
Duzib205G0978 Durio zibethinus HOM05D007538 ORTHO05D009464 3.3e-38 163.3 349 35.2
RcHm_v2.0_Chr7g0211801 Rosa chinensis HOM05D007538 ORTHO05D009464 6.8e-36 155.6 355 33.8
Prupe.5G028100 Prunus persica HOM05D007538 ORTHO05D009464 1.2e-35 154.8 233 43.3
COL.COLO4_16943 Corchorus olitorius HOM05D007538 ORTHO05D009464 5.8e-35 152.5 346 36.7
Gorai.008G224100 Gossypium raimondii HOM05D007538 ORTHO05D009464 4.9e-34 149.4 351 34.8
TWI60G0985 Tripterygium wilfordii HOM05D007538 ORTHO05D009464 4.9e-34 149.4 359 35.1
Actinidia01319 Actinidia chinensis HOM05D007538 ORTHO05D009464 6.4e-34 149.1 242 44.2
Gohir.D12G208500 Gossypium hirsutum HOM05D007538 ORTHO05D009464 1.4e-33 147.9 351 34.5
Haze_08148 Corylus avellana HOM05D007538 ORTHO05D009464 5.4e-33 146.0 345 34.8
TAR629G0149 Trochodendron aralioides HOM05D007538 ORTHO05D009464 7.1e-33 145.6 378 35.4
Hund14370 Selenicereus undatus HOM05D007538 ORTHO05D009464 1.3e-31 141.4 369 33.6
FAN04G2865 Fragaria x ananassa HOM05D007538 ORTHO05D009464 1.7e-31 141.0 344 33.4
TWI15G0751 Tripterygium wilfordii HOM05D007538 ORTHO05D009464 2.3e-31 140.6 317 36.0
CANSAT21G1184 Cannabis sativa HOM05D007538 ORTHO05D009464 3.9e-31 139.8 351 34.2
PSO063G5413 Papaver somniferum HOM05D007538 ORTHO05D009464 5.1e-31 139.4 352 34.9
Lj2g0003780 Lotus japonicus HOM05D007538 ORTHO05D009464 6.6e-31 139.0 344 34.3
GSVIVG01013092001 Vitis vinifera HOM05D007538 ORTHO05D009464 1.1e-30 138.3 354 34.2
Potri.001G137000 Populus trichocarpa HOM05D007538 ORTHO05D009464 2.1e-29 134.0 360 35.0
Gohir.A12G206200 Gossypium hirsutum HOM05D007538 ORTHO05D009464 4.8e-29 132.9 355 33.5
TPR.G19431 Trifolium pratense HOM05D007538 ORTHO05D009464 8.1e-29 132.1 351 33.3
Rhsim11G0021400 Rhododendron simsii HOM05D007538 ORTHO05D009464 1.1e-28 131.7 351 33.3
vmacro00280 Vaccinium macrocarpon HOM05D007538 ORTHO05D009464 1.4e-28 131.3 336 33.9
Eucgr.E00229 Eucalyptus grandis HOM05D007538 ORTHO05D009464 1.8e-28 131.0 360 32.5
Glyma.09G207600 Glycine max HOM05D007538 ORTHO05D009464 6.9e-28 129.0 351 33.0
Atru.chr6.1522 Acer truncatum HOM05D007538 ORTHO05D009464 9.0e-28 128.6 315 35.6
Sabra01G0106100 Salix brachista HOM05D007538 ORTHO05D009464 1.5e-27 127.9 343 36.2
Lalb_Chr05g0215781 Lupinus albus HOM05D007538 ORTHO05D009464 5.8e-27 125.9 350 32.6
Aqoxy3G02177 Aquilegia oxysepala HOM05D007538 ORTHO05D009464 2.9e-26 123.6 353 32.9
Medtr5g029310 Medicago truncatula HOM05D007538 ORTHO05D009464 8.4e-26 122.1 344 32.8
Cc08_g03440 Coffea canephora HOM05D007538 ORTHO05D009464 1.1e-25 121.7 343 35.3
VMungo1215G0128 Vigna mungo HOM05D007538 ORTHO05D009464 2.4e-25 120.6 351 32.2
CANSAT21G1947 Cannabis sativa HOM05D007538 ORTHO05D009464 3.2e-25 120.2 317 34.1
AUR62018643 Chenopodium quinoa HOM05D007538 ORTHO05D009464 3.2e-25 120.2 356 31.7
FAN18G1171 Fragaria x ananassa HOM05D007538 ORTHO05D009464 4.2e-25 119.8 344 31.4
AUR62007351 Chenopodium quinoa HOM05D007538 ORTHO05D009464 5.4e-25 119.4 357 32.5
PGR042G1771 Punica granatum HOM05D007538 ORTHO05D009464 5.4e-25 119.4 355 31.5
Manes.17G017000 Manihot esculenta HOM05D007538 ORTHO05D009464 9.3e-25 118.6 370 31.4
Lalb_Chr16g0381091 Lupinus albus HOM05D007538 ORTHO05D009464 1.2e-24 118.2 358 31.8
SalBow6G3044 Salvia bowleyana HOM05D007538 ORTHO05D009464 2.7e-24 117.1 370 31.6
Glyma.01G014500 Glycine max HOM05D007538 ORTHO05D009464 1.3e-23 114.8 299 34.4
Nn1g00207 Nelumbo nucifera HOM05D007538 ORTHO05D009464 2.3e-23 114.0 344 30.8
ECA240G2786 Erigeron canadensis HOM05D007538 ORTHO05D009464 3.0e-23 113.6 337 31.2
Oeu027088.1 Olea europaea HOM05D007538 ORTHO05D009464 1.1e-22 111.7 372 33.3
Peaxi162Scf00170g00623 Petunia axillaris HOM05D007538 ORTHO05D009464 1.1e-22 111.7 338 33.1
Haze_08149 Corylus avellana HOM05D007538 ORTHO05D009464 1.5e-22 111.3 231 35.9
Ca_25180_v3 Cicer arietinum L. HOM05D007538 ORTHO05D009464 1.9e-22 110.9 341 33.1
Ah.12g055490 Amaranthus hybridus HOM05D007538 ORTHO05D009464 5.6e-22 109.4 236 36.4
MSTRG.13737 Avicennia marina HOM05D007538 ORTHO05D009464 9.6e-22 108.6 379 31.4
Phvul.002G136900 Phaseolus vulgaris HOM05D007538 ORTHO05D009464 1.6e-21 107.8 349 30.4
MELO3C013823.2 Cucumis melo HOM05D007538 ORTHO05D009464 2.8e-21 107.1 343 32.1
arahy.Tifrunner.gnm1.ann1.IVG2V7 Arachis hypogaea HOM05D007538 ORTHO05D009464 4.8e-21 106.3 367 30.2
arahy.Tifrunner.gnm1.ann1.UGGX0P Arachis hypogaea HOM05D007538 ORTHO05D009464 4.8e-21 106.3 367 30.2
Migut.E00746 Erythranthe guttata HOM05D007538 ORTHO05D009464 4.8e-21 106.3 354 32.2
HanXRQChr03g0083271 Helianthus annuus HOM05D007538 ORTHO05D009464 6.2e-21 105.9 337 31.2
Nitab4.5_0000529g0180 Nicotiana tabacum HOM05D007538 ORTHO05D009464 1.4e-20 104.8 335 31.3
Psat0s3175g0080 Pisum sativum HOM05D007538 ORTHO05D009464 1.8e-20 104.4 331 32.9
ClCG10G001280 Citrullus lanatus HOM05D007538 ORTHO05D009464 4.0e-20 103.2 343 29.7
PGSC0003DMG400014793 Solanum tuberosum HOM05D007538 ORTHO05D009464 9.0e-20 102.1 348 32.8
Nitab4.5_0000809g0070 Nicotiana tabacum HOM05D007538 ORTHO05D009464 1.2e-19 101.7 341 32.3
CsaV3_3G001350 Cucumis sativus L. HOM05D007538 ORTHO05D009464 2.0e-19 100.9 341 31.1
Os02g0697200 Oryza sativa ssp. japonica HOM05D007538 ORTHO05D009464 7.6e-19 99.0 380 27.6
Sc01g0007170 Simmondsia chinensis HOM05D007538 ORTHO05D009464 2.9e-18 97.1 258 36.0
EL10Ac5g12015 Beta vulgaris HOM05D007538 ORTHO05D009464 4.9e-18 96.3 348 30.7
Solyc08g076430.3 Solanum lycopersicum HOM05D007538 ORTHO05D009464 4.9e-18 96.3 338 31.7
Sopen08g025010 Solanum pennellii HOM05D007538 ORTHO05D009464 2.4e-17 94.0 338 30.2
Lsat_1_v5_gn_6_80020 Lactuca sativa HOM05D007538 ORTHO05D009464 3.5e-16 90.1 328 29.9
Zm00001eb187890 Zea mays HOM05D007538 ORTHO05D009464 3.5e-16 90.1 341 27.6
Sed0002033 Sechium edule HOM05D007538 ORTHO05D009464 1.1e-14 85.1 346 27.5
Cpa.g.sc208.8 Carica papaya HOM05D007538 ORTHO05D009464 4.3e-14 83.2 273 34.4
SEGI_18774 Sequoiadendron giganteum HOM05D007538 ORTHO05D009464 1.0e-10 72.0 371 25.3
SGA_v2.0_scaffold36G14297 Striga asiatica HOM05D006137 ORTHO05D007697 1.7e-10 71.2 336 27.7
MBI04_g44375_MAGBIO Magnolia biondii HOM05D007538 ORTHO05D009464 2.7e-08 63.9 158 35.4
unitig_22.g5510 Utricularia gibba HOM05D007538 ORTHO05D009464 4.6e-08 63.2 347 27.4
MBI04_g32200_MAGBIO Magnolia biondii HOM05D007538 ORTHO05D009464 8.7e-07 58.9 98 38.8
Psat0s1646g0240 Pisum sativum HOM05D007538 ORTHO05D009464 8.7e-07 58.9 157 33.8
HPP92_020896 Vanilla planifolia HOM05D007538 ORTHO05D009464 5.7e-06 56.2 352 26.7


User provided reference genes

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