Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_008203 Daucus carota HOM05D006140 ORTHO05D007834 0.0e+00 1378.2 705 100.0
Dinv06909 Davidia involucrata HOM05D006140 ORTHO05D007834 5.5e-157 558.9 728 48.1
Actinidia14773 Actinidia chinensis HOM05D006140 ORTHO05D007834 5.9e-151 538.9 717 45.6
CSS0008724 Camellia sinensis var. sinensis HOM05D006140 ORTHO05D007834 2.5e-133 480.3 727 43.1
TAR629G0094 Trochodendron aralioides HOM05D006140 ORTHO05D007834 3.7e-121 439.9 734 40.1
vmacro14212 Vaccinium macrocarpon HOM05D006140 ORTHO05D007834 5.9e-119 432.6 902 36.5
CiPaw.11G100200 Carya illinoinensis HOM05D006140 ORTHO05D007834 1.0e-118 431.8 720 41.4
Rhsim07G0134400 Rhododendron simsii HOM05D006140 ORTHO05D007834 6.6e-118 429.1 656 41.9
Atru.chr6.1557 Acer truncatum HOM05D006140 ORTHO05D007834 1.1e-115 421.8 497 47.3
TWI60G0968 Tripterygium wilfordii HOM05D006140 ORTHO05D007834 1.3e-113 414.8 741 38.7
HanXRQChr15g0469721 Helianthus annuus HOM05D006140 ORTHO05D007834 7.8e-111 405.6 527 48.0
Gohir.A12G205000 Gossypium hirsutum HOM05D006140 ORTHO05D007834 1.7e-110 404.4 732 39.3
Manes.17G016001 Manihot esculenta HOM05D006140 ORTHO05D007834 1.7e-110 404.4 731 38.4
QL12p000198 Quercus lobata HOM05D006140 ORTHO05D007834 1.1e-109 401.7 769 38.2
Prupe.5G025700 Prunus persica HOM05D006140 ORTHO05D007834 7.3e-109 399.1 722 37.3
Potri.003G098700 Populus trichocarpa HOM05D006140 ORTHO05D007834 9.5e-109 398.7 733 38.7
Potri.001G134800 Populus trichocarpa HOM05D006140 ORTHO05D007834 8.9e-107 392.1 736 38.3
Sopen08g024830 Solanum pennellii HOM05D006140 ORTHO05D007834 1.5e-106 391.3 719 37.3
Duzib205G1045 Durio zibethinus HOM05D006140 ORTHO05D007834 1.7e-105 387.9 717 38.4
ECA233G4025 Erigeron canadensis HOM05D006140 ORTHO05D007834 4.9e-105 386.3 530 44.2
Gohir.D12G207400 Gossypium hirsutum HOM05D006140 ORTHO05D007834 6.4e-105 386.0 529 44.0
Gorai.008G222800 Gossypium raimondii HOM05D006140 ORTHO05D007834 8.3e-105 385.6 531 44.1
Cfa012537 Carpinus fangiana HOM05D006140 ORTHO05D007834 6.0e-103 379.4 714 38.9
Nn1g01908 Nelumbo nucifera HOM05D006140 ORTHO05D007834 1.0e-102 378.6 695 38.8
Migut.A00588 Erythranthe guttata HOM05D006140 ORTHO05D007834 1.3e-102 378.3 723 37.8
Aqoxy3G02157 Aquilegia oxysepala HOM05D006140 ORTHO05D007834 1.1e-99 368.6 521 42.6
Solyc08g076190.3 Solanum lycopersicum HOM05D006140 ORTHO05D007834 1.2e-98 365.2 727 35.4
Lsat_1_v5_gn_6_17700 Lactuca sativa HOM05D006140 ORTHO05D007834 2.0e-98 364.4 675 40.3
Sabra01G0104200 Salix brachista HOM05D006140 ORTHO05D007834 2.0e-98 364.4 570 41.4
VMungo1215G1486 Vigna mungo HOM05D006140 ORTHO05D007834 2.2e-97 360.9 737 35.1
Glyma.09G210300 Glycine max HOM05D006140 ORTHO05D007834 4.9e-97 359.8 524 42.2
Sc22g0001920 Simmondsia chinensis HOM05D006140 ORTHO05D007834 6.4e-97 359.4 736 34.8
RcHm_v2.0_Chr7g0212401 Rosa chinensis HOM05D006140 ORTHO05D007834 8.4e-97 359.0 732 35.9
CANSAT21G0745 Cannabis sativa HOM05D006140 ORTHO05D007834 4.1e-96 356.7 661 37.1
FAN18G2089 Fragaria x ananassa HOM05D006140 ORTHO05D007834 1.6e-95 354.8 699 35.6
Peaxi162Scf00879g00021 Petunia axillaris HOM05D006140 ORTHO05D007834 1.6e-95 354.8 727 35.9
Glyma.01G010800 Glycine max HOM05D006140 ORTHO05D007834 1.0e-94 352.1 710 35.9
FvH4_5g23380 Fragaria vesca HOM05D006140 ORTHO05D007834 1.7e-94 351.3 696 35.6
Lalb_Chr09g0325351 Lupinus albus HOM05D006140 ORTHO05D007834 1.7e-94 351.3 680 36.9
FAN18G2328 Fragaria x ananassa HOM05D006140 ORTHO05D007834 1.1e-93 348.6 705 35.6
MD06G1024600 Malus domestica HOM05D006140 ORTHO05D007834 2.5e-93 347.4 535 41.5
ClCG09G011510 Citrullus lanatus HOM05D006140 ORTHO05D007834 3.3e-93 347.1 731 35.6
Phvul.002G133700 Phaseolus vulgaris HOM05D006140 ORTHO05D007834 4.3e-93 346.7 692 34.7
CsaV3_3G048750 Cucumis sativus L. HOM05D006140 ORTHO05D007834 5.6e-93 346.3 735 35.1
FAN08G2467 Fragaria x ananassa HOM05D006140 ORTHO05D007834 2.1e-92 344.4 704 35.8
Sed0012782 Sechium edule HOM05D006140 ORTHO05D007834 2.8e-92 344.0 727 35.6
CARHR176410 Cardamine hirsuta HOM05D006140 ORTHO05D007834 6.2e-92 342.8 490 41.4
Sp2g10500 Schrenkiella parvula HOM05D006140 ORTHO05D007834 2.4e-91 340.9 657 36.4
THA.LOC104798454 Tarenaya hassleriana HOM05D006140 ORTHO05D007834 5.2e-91 339.7 715 35.2
Aa31LG9G7440 Aethionema arabicum HOM05D006140 ORTHO05D007834 1.3e-89 335.1 648 35.6
SGA_v2.0_scaffold89G27431 Striga asiatica HOM05D006140 ORTHO05D007834 1.3e-89 335.1 726 34.3
Nitab4.5_0000543g0200 Nicotiana tabacum HOM05D006140 ORTHO05D007834 2.2e-89 334.3 769 33.2
BcaC06g34418 Brassica carinata HOM05D006140 ORTHO05D007834 3.8e-89 333.6 661 36.2
C07p28720 Brassica napus HOM05D006140 ORTHO05D007834 3.8e-89 333.6 661 36.2
BolC7t43410H Brassica oleracea HOM05D006140 ORTHO05D007834 3.8e-89 333.6 661 36.2
BraA06t27522Z Brassica rapa HOM05D006140 ORTHO05D007834 8.4e-89 332.4 662 36.9
A06p46490 Brassica napus HOM05D006140 ORTHO05D007834 1.9e-88 331.3 664 36.3
Psat2g140200 Pisum sativum HOM05D006140 ORTHO05D007834 3.2e-88 330.5 493 39.1
PGR042G2343 Punica granatum HOM05D006140 ORTHO05D007834 1.6e-87 328.2 656 36.3
Thecc.03G312700 Theobroma cacao HOM05D006140 ORTHO05D007834 1.6e-87 328.2 516 41.3
BcaC06g31534 Brassica carinata HOM05D006140 ORTHO05D007834 2.7e-87 327.4 718 34.7
EL10Ac5g11927 Beta vulgaris HOM05D006140 ORTHO05D007834 4.6e-87 326.6 525 42.1
GSVIVG01012994001 Vitis vinifera HOM05D006140 ORTHO05D007834 4.6e-87 326.6 338 54.4
AUR62027322 Chenopodium quinoa HOM05D006140 ORTHO05D007834 7.8e-87 325.9 667 35.5
AUR62007410 Chenopodium quinoa HOM05D006140 ORTHO05D007834 8.7e-86 322.4 522 39.3
TPR.G19464 Trifolium pratense HOM05D006140 ORTHO05D007834 1.9e-85 321.2 489 39.9
arahy.Tifrunner.gnm1.ann1.B53Y8P Arachis hypogaea HOM05D006140 ORTHO05D007834 4.3e-85 320.1 686 34.3
arahy.Tifrunner.gnm1.ann1.HKBA6R Arachis hypogaea HOM05D006140 ORTHO05D007834 4.3e-85 320.1 686 34.3
PSO063G5188 Papaver somniferum HOM05D006140 ORTHO05D007834 9.6e-85 318.9 517 39.3
SalBow1G1748 Salvia bowleyana HOM05D006140 ORTHO05D007834 6.2e-84 316.2 723 33.6
PSO782G1224 Papaver somniferum HOM05D006140 ORTHO05D007834 1.1e-83 315.5 517 38.7
Ca_25157_v3 Cicer arietinum L. HOM05D006140 ORTHO05D007834 4.5e-82 310.1 721 33.1
Thhalv10000816m.g Eutrema salsugineum HOM05D006140 ORTHO05D007834 9.9e-82 308.9 650 34.2
AL8G13070 Arabidopsis lyrata HOM05D006140 ORTHO05D007834 1.4e-80 305.1 669 34.4
Lj2g0005195 Lotus japonicus HOM05D006140 ORTHO05D007834 3.2e-80 303.9 727 31.4
Hund11103 Selenicereus undatus HOM05D006140 ORTHO05D007834 4.2e-80 303.5 685 36.5
Nitab4.5_0003023g0010 Nicotiana tabacum HOM05D006140 ORTHO05D007834 2.3e-78 297.7 770 30.8
AT5G45610 Arabidopsis thaliana HOM05D006140 ORTHO05D007834 1.5e-77 295.0 668 32.9
Carub.0008s0241 Capsella rubella HOM05D006140 ORTHO05D007834 8.1e-76 289.3 648 34.7
Ciclev10003207m.g Citrus clementina HOM05D006140 ORTHO05D007834 1.1e-75 288.9 351 48.4
FAN04G1734 Fragaria x ananassa HOM05D006140 ORTHO05D007834 3.4e-74 283.9 399 42.4
Medtr5g027920 Medicago truncatula HOM05D006140 ORTHO05D007834 3.4e-74 283.9 522 34.9
ATR0829G104 Amborella trichopoda HOM05D006140 ORTHO05D007834 3.0e-70 270.8 524 34.9
MELO3C030376.2 Cucumis melo HOM05D006140 ORTHO05D007834 4.0e-67 260.4 812 31.2
Cc00_g09430 Coffea canephora HOM05D006140 ORTHO05D007834 4.9e-65 253.4 277 47.7
PGSC0003DMG401009319 Solanum tuberosum HOM05D006140 ORTHO05D007834 5.5e-64 250.0 277 47.3
HPP92_020808 Vanilla planifolia HOM05D006140 ORTHO05D007834 8.7e-62 242.7 522 33.3
Zm00001eb208860 Zea mays HOM05D006140 ORTHO05D007834 3.6e-55 220.7 526 31.4
Ah.12g055990 Amaranthus hybridus HOM05D006140 ORTHO05D007834 2.2e-52 211.5 663 31.7
Lj3g0005794 Lotus japonicus HOM05D006140 ORTHO05D007834 1.2e-50 205.7 228 47.8
Haze_08125 Corylus avellana HOM05D006140 ORTHO05D007834 3.8e-41 174.1 152 63.8
unitig_32.g10971 Utricularia gibba HOM05D006140 ORTHO05D007834 3.8e-41 174.1 524 30.2
Eucgr.E01307 Eucalyptus grandis HOM05D006140 ORTHO05D007834 1.6e-39 168.7 325 35.1
Hma1.2p1_1460F.1_g284980 Hydrangea macrophylla HOM05D006140 ORTHO05D007834 3.7e-36 157.5 123 68.3
SEGI_17370 Sequoiadendron giganteum HOM05D006140 ORTHO05D007834 1.1e-35 156.0 547 26.1
Actinidia24581 Actinidia chinensis HOM05D006140 ORTHO05D007834 1.2e-34 152.5 244 39.3
Lj6g0014120 Lotus japonicus HOM05D006140 ORTHO05D007834 5.2e-30 137.1 148 50.7
MBI04_g36019_MAGBIO Magnolia biondii HOM05D006140 ORTHO05D007834 1.7e-28 132.1 421 30.6
CDE02G1222 Ceratophyllum demersum HOM05D006140 ORTHO05D007834 9.1e-27 126.3 148 52.7
MBI04_g20983_MAGBIO Magnolia biondii HOM05D006140 ORTHO05D007834 2.2e-25 121.7 132 51.5
PGSC0003DMG402009319 Solanum tuberosum HOM05D006140 ORTHO05D007834 6.5e-25 120.2 335 31.6
COL.COLO4_16905 Corchorus olitorius HOM05D006140 ORTHO05D007834 7.2e-24 116.7 286 32.2
Cc00_g09420 Coffea canephora HOM05D006140 ORTHO05D007834 1.2e-23 115.9 389 30.3
SHI20257 Sapria himalayana HOM05D006140 ORTHO05D007834 4.5e-18 97.4 158 39.9
Hma1.2p1_1819F.1_g304030 Hydrangea macrophylla HOM05D006140 ORTHO05D007834 3.8e-17 94.4 90 51.1
Pp3c4_25200 Physcomitrium patens HOM05D006140 ORTHO05D007834 4.2e-16 90.9 570 20.5
Cpa.g.sc16.12 Carica papaya HOM05D006140 ORTHO05D007834 8.0e-15 86.7 169 34.3
SHI20259 Sapria himalayana HOM05D006140 ORTHO05D007834 4.0e-14 84.3 295 27.8
SMO367G0412 Selaginella moellendorffii HOM05D006140 ORTHO05D007834 3.7e-12 77.8 483 22.2
Mapoly0016s0037 Marchantia polymorpha HOM05D006140 ORTHO05D007834 6.3e-12 77.0 489 20.0
Ciclev10003621m.g Citrus clementina HOM05D006140 ORTHO05D007834 3.8e-09 67.8 116 36.2
Oeu063929.1 Olea europaea HOM05D006140 ORTHO05D007834 8.6e-09 66.6 50 62.0
CBR_g24386 Chara braunii HOM05D006140 ORTHO05D007834 8.9e-06 56.6 166 30.1


User provided reference genes

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