Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_008183 Daucus carota HOM05D005964 ORTHO05D007242 1.3e-162 576.2 282 100.0
Dinv28013 Davidia involucrata HOM05D005964 ORTHO05D007242 4.0e-82 308.9 293 54.6
Lj8A334G75 Lonicera japonica HOM05D005964 ORTHO05D007242 5.2e-82 308.5 282 56.7
Actinidia18160 Actinidia chinensis HOM05D005964 ORTHO05D007242 2.7e-78 296.2 296 53.0
Actinidia14743 Actinidia chinensis HOM05D005964 ORTHO05D007242 3.5e-78 295.8 288 54.2
HanXRQChr13g0412031 Helianthus annuus HOM05D005964 ORTHO05D007242 7.7e-78 294.7 285 53.3
Prupe.5G020400 Prunus persica HOM05D005964 ORTHO05D007242 5.0e-77 292.0 296 54.4
ECA240G3292 Erigeron canadensis HOM05D005964 ORTHO05D007242 1.1e-76 290.8 293 52.9
Cfa012590 Carpinus fangiana HOM05D005964 ORTHO05D007242 2.5e-76 289.7 291 54.0
MD06G1015300 Malus domestica HOM05D005964 ORTHO05D007242 2.5e-76 289.7 293 53.2
Hma1.2p1_0544F.1_g175520 Hydrangea macrophylla HOM05D005964 ORTHO05D007242 7.2e-76 288.1 261 56.7
MD00G1001800 Malus domestica HOM05D005964 ORTHO05D007242 1.8e-74 283.5 290 53.4
RcHm_v2.0_Chr7g0213391 Rosa chinensis HOM05D005964 ORTHO05D007242 2.3e-74 283.1 295 50.2
FvH4_5g23960 Fragaria vesca HOM05D005964 ORTHO05D007242 4.0e-74 282.3 280 51.1
Potri.001G130900 Populus trichocarpa HOM05D005964 ORTHO05D007242 8.9e-74 281.2 294 51.7
TAR381G0569 Trochodendron aralioides HOM05D005964 ORTHO05D007242 1.2e-73 280.8 296 52.7
Nitab4.5_0000030g0090 Nicotiana tabacum HOM05D005964 ORTHO05D007242 2.6e-73 279.6 277 52.0
Manes.17G003600 Manihot esculenta HOM05D005964 ORTHO05D007242 4.4e-73 278.9 285 53.0
Potri.003G103000 Populus trichocarpa HOM05D005964 ORTHO05D007242 4.4e-73 278.9 294 51.0
Nitab4.5_0002930g0010 Nicotiana tabacum HOM05D005964 ORTHO05D007242 5.7e-73 278.5 269 53.5
FAN13G2421 Fragaria x ananassa HOM05D005964 ORTHO05D007242 7.5e-73 278.1 282 51.4
FAN18G2518 Fragaria x ananassa HOM05D005964 ORTHO05D007242 7.5e-73 278.1 280 50.7
Peaxi162Scf02295g00024 Petunia axillaris HOM05D005964 ORTHO05D007242 9.8e-73 277.7 271 53.9
CANSAT21G0049 Cannabis sativa HOM05D005964 ORTHO05D007242 1.3e-72 277.3 292 51.4
Gohir.A03G000012 Gossypium hirsutum HOM05D005964 ORTHO05D007242 2.9e-72 276.2 282 52.5
CiPaw.11G103200 Carya illinoinensis HOM05D005964 ORTHO05D007242 6.4e-72 275.0 298 51.3
Cc08_g05080 Coffea canephora HOM05D005964 ORTHO05D007242 1.4e-71 273.9 254 54.3
Lsat_1_v5_gn_5_58981 Lactuca sativa HOM05D005964 ORTHO05D007242 1.4e-71 273.9 297 49.8
MSTRG.1771 Avicennia marina HOM05D005964 ORTHO05D007242 2.4e-71 273.1 302 50.3
Solyc08g075770.3 Solanum lycopersicum HOM05D005964 ORTHO05D007242 4.1e-71 272.3 285 51.2
Atru.chr6.1471 Acer truncatum HOM05D005964 ORTHO05D007242 7.0e-71 271.6 290 51.4
MELO3C013795.2 Cucumis melo HOM05D005964 ORTHO05D007242 7.0e-71 271.6 290 49.3
CsaV3_3G001060 Cucumis sativus L. HOM05D005964 ORTHO05D007242 7.0e-71 271.6 290 49.3
Migut.E01349 Erythranthe guttata HOM05D005964 ORTHO05D007242 7.0e-71 271.6 272 53.7
Sopen08g024420 Solanum pennellii HOM05D005964 ORTHO05D007242 7.0e-71 271.6 285 51.2
Dinv22873 Davidia involucrata HOM05D005964 ORTHO05D007242 9.2e-71 271.2 274 54.7
Eucgr.E01239 Eucalyptus grandis HOM05D005964 ORTHO05D007242 9.2e-71 271.2 292 49.3
Eucgr.E01230 Eucalyptus grandis HOM05D005964 ORTHO05D007242 2.0e-70 270.0 292 49.0
Sed0000446 Sechium edule HOM05D005964 ORTHO05D007242 1.0e-69 267.7 279 50.5
Ciclev10002048m.g Citrus clementina HOM05D005964 ORTHO05D007242 1.7e-69 266.9 271 51.7
Duzib084G0482 Durio zibethinus HOM05D005964 ORTHO05D007242 1.7e-69 266.9 285 51.2
Gohir.D03G177900 Gossypium hirsutum HOM05D005964 ORTHO05D007242 3.9e-69 265.8 306 49.3
Gorai.003G187200 Gossypium raimondii HOM05D005964 ORTHO05D007242 3.9e-69 265.8 306 49.3
Hma1.2p1_0544F.1_g175510 Hydrangea macrophylla HOM05D005964 ORTHO05D007242 8.6e-69 264.6 193 66.3
EL10Ac5g11971 Beta vulgaris HOM05D005964 ORTHO05D007242 1.1e-68 264.2 292 52.1
Gorai.004G178600 Gossypium raimondii HOM05D005964 ORTHO05D007242 1.1e-68 264.2 287 50.5
Duzib205G1143 Durio zibethinus HOM05D005964 ORTHO05D007242 1.5e-68 263.8 290 50.3
Gohir.A08G150100 Gossypium hirsutum HOM05D005964 ORTHO05D007242 2.5e-68 263.1 296 48.6
SalBow8G2874 Salvia bowleyana HOM05D005964 ORTHO05D007242 2.5e-68 263.1 178 68.0
Thecc.03G317600 Theobroma cacao HOM05D005964 ORTHO05D007242 7.3e-68 261.5 289 50.2
SGA_v2.0_scaffold111G31365 Striga asiatica HOM05D005964 ORTHO05D007242 1.2e-67 260.8 299 47.2
Sc01g0007030 Simmondsia chinensis HOM05D005964 ORTHO05D007242 2.8e-67 259.6 258 53.1
Rhsim07G0138900 Rhododendron simsii HOM05D005964 ORTHO05D007242 3.6e-67 259.2 365 41.4
Lalb_Chr05g0215451 Lupinus albus HOM05D005964 ORTHO05D007242 4.7e-67 258.8 289 47.8
Glyma.09G213600 Glycine max HOM05D005964 ORTHO05D007242 4.0e-66 255.8 298 47.0
Oeu046805.1 Olea europaea HOM05D005964 ORTHO05D007242 5.2e-66 255.4 299 48.2
VMungo1215G0316 Vigna mungo HOM05D005964 ORTHO05D007242 5.2e-66 255.4 287 48.8
PGR042G2449 Punica granatum HOM05D005964 ORTHO05D007242 1.2e-65 254.2 273 50.2
GSVIVG01022785001 Vitis vinifera HOM05D005964 ORTHO05D007242 1.5e-65 253.8 192 61.5
MBI04_g27277_MAGBIO Magnolia biondii HOM05D005964 ORTHO05D007242 3.4e-65 252.7 291 48.1
CSS0036776 Camellia sinensis var. sinensis HOM05D005964 ORTHO05D007242 1.3e-64 250.8 218 56.4
Glyma.01G149400 Glycine max HOM05D005964 ORTHO05D007242 2.9e-64 249.6 288 46.9
Psat2g142160 Pisum sativum HOM05D005964 ORTHO05D007242 1.1e-63 247.7 292 45.5
unitig_899.g14736 Utricularia gibba HOM05D005964 ORTHO05D007242 1.1e-63 247.7 292 45.2
FAN18G4345 Fragaria x ananassa HOM05D005964 ORTHO05D007242 1.9e-63 246.9 178 63.5
TPR.G17260 Trifolium pratense HOM05D005964 ORTHO05D007242 5.4e-63 245.4 288 46.5
Gohir.D08G171200 Gossypium hirsutum HOM05D005964 ORTHO05D007242 1.6e-62 243.8 195 62.6
Lj2g0015502 Lotus japonicus HOM05D005964 ORTHO05D007242 1.6e-62 243.8 287 46.3
Nn1g02066 Nelumbo nucifera HOM05D005964 ORTHO05D007242 1.6e-62 243.8 191 63.4
Sabra03G0070200 Salix brachista HOM05D005964 ORTHO05D007242 6.0e-62 241.9 226 56.2
QL12p001050 Quercus lobata HOM05D005964 ORTHO05D007242 1.0e-61 241.1 201 59.7
arahy.Tifrunner.gnm1.ann1.NL6YXC Arachis hypogaea HOM05D005964 ORTHO05D007242 6.6e-61 238.4 288 47.9
arahy.Tifrunner.gnm1.ann1.PBCI2P Arachis hypogaea HOM05D005964 ORTHO05D007242 6.6e-61 238.4 288 47.9
AUR62018605 Chenopodium quinoa HOM05D005964 ORTHO05D007242 6.6e-61 238.4 179 65.9
Medtr5g026860 Medicago truncatula HOM05D005964 ORTHO05D007242 1.1e-60 237.7 302 46.0
MSTRG.13905 Avicennia marina HOM05D005964 ORTHO05D007242 1.9e-60 236.9 172 63.4
TWI12G1028 Tripterygium wilfordii HOM05D005964 ORTHO05D007242 2.5e-60 236.5 251 49.8
HanXRQChr03g0081171 Helianthus annuus HOM05D005964 ORTHO05D007242 3.3e-60 236.1 289 46.4
Aqoxy7G00888 Aquilegia oxysepala HOM05D005964 ORTHO05D007242 7.3e-60 235.0 278 49.6
Sabra01G0101200 Salix brachista HOM05D005964 ORTHO05D007242 1.4e-58 230.7 224 52.2
THA.LOC104811073 Tarenaya hassleriana HOM05D005964 ORTHO05D007242 1.2e-57 227.6 293 45.4
BcaNung04009 Brassica carinata HOM05D005964 ORTHO05D007242 2.9e-56 223.0 290 42.1
Os04g0600400 Oryza sativa ssp. japonica HOM05D005964 ORTHO05D007242 8.3e-56 221.5 284 43.7
BcaNung03076 Brassica carinata HOM05D005964 ORTHO05D007242 1.4e-55 220.7 291 44.0
Hund11143 Selenicereus undatus HOM05D005964 ORTHO05D007242 2.4e-55 219.9 247 50.2
BcaC06g30611 Brassica carinata HOM05D005964 ORTHO05D007242 5.4e-55 218.8 283 43.8
Sp7g17840 Schrenkiella parvula HOM05D005964 ORTHO05D007242 9.2e-55 218.0 294 42.2
Zm00001eb071860 Zea mays HOM05D005964 ORTHO05D007242 9.2e-55 218.0 293 42.7
vmacro14234 Vaccinium macrocarpon HOM05D005964 ORTHO05D007242 1.2e-54 217.6 127 74.0
AL7G34950 Arabidopsis lyrata HOM05D005964 ORTHO05D007242 1.6e-54 217.2 282 43.6
CARHR226010 Cardamine hirsuta HOM05D005964 ORTHO05D007242 1.6e-54 217.2 286 43.0
AT4G19140 Arabidopsis thaliana HOM05D005964 ORTHO05D007242 6.0e-54 215.3 282 42.6
PSO675G7054 Papaver somniferum HOM05D005964 ORTHO05D007242 6.0e-54 215.3 275 45.1
Phvul.002G128700 Phaseolus vulgaris HOM05D005964 ORTHO05D007242 6.0e-54 215.3 190 57.9
BcaC09g51437 Brassica carinata HOM05D005964 ORTHO05D007242 7.8e-54 214.9 292 42.8
Carub.0007s2201 Capsella rubella HOM05D005964 ORTHO05D007242 3.0e-53 213.0 290 41.7
BolC7t45529H Brassica oleracea HOM05D005964 ORTHO05D007242 8.6e-53 211.5 304 42.1
Thhalv10025843m.g Eutrema salsugineum HOM05D005964 ORTHO05D007242 1.5e-52 210.7 273 41.4
A01p11100 Brassica napus HOM05D005964 ORTHO05D007242 2.5e-52 209.9 301 41.9
BraA01t01056Z Brassica rapa HOM05D005964 ORTHO05D007242 2.5e-52 209.9 301 41.9
C01p13130 Brassica napus HOM05D005964 ORTHO05D007242 3.6e-51 206.1 304 41.1
BolC1t01286H Brassica oleracea HOM05D005964 ORTHO05D007242 3.6e-51 206.1 304 41.1
Aa31LG6G1830 Aethionema arabicum HOM05D005964 ORTHO05D007242 1.4e-50 204.1 299 39.1
ATR0829G145 Amborella trichopoda HOM05D005964 ORTHO05D007242 6.8e-50 201.8 177 55.9
PSO717G0069 Papaver somniferum HOM05D005964 ORTHO05D007242 3.4e-49 199.5 171 56.7
AUR62007382 Chenopodium quinoa HOM05D005964 ORTHO05D007242 1.7e-48 197.2 214 52.3
THA.LOC104806194 Tarenaya hassleriana HOM05D005964 ORTHO05D007242 3.7e-48 196.1 194 50.5
CDE12G0810 Ceratophyllum demersum HOM05D005964 ORTHO05D007242 1.4e-47 194.1 200 49.5
ClCG10G001030 Citrullus lanatus HOM05D005964 ORTHO05D007242 9.2e-47 191.4 281 40.6
BraA03t14264Z Brassica rapa HOM05D005964 ORTHO05D007242 2.1e-46 190.3 307 38.1
arahy.Tifrunner.gnm1.ann1.MDU2JP Arachis hypogaea HOM05D005964 ORTHO05D007242 6.0e-46 188.7 228 45.6
C07p50270 Brassica napus HOM05D005964 ORTHO05D007242 1.4e-39 167.5 279 38.7
SEGI_32375 Sequoiadendron giganteum HOM05D005964 ORTHO05D007242 7.8e-38 161.8 170 46.5
A03p51750 Brassica napus HOM05D005964 ORTHO05D007242 1.4e-34 151.0 154 51.9
PGSC0003DMG400030871 Solanum tuberosum HOM05D005964 ORTHO05D007242 2.6e-33 146.7 178 46.1
PSO717G0022 Papaver somniferum HOM05D005964 ORTHO05D007242 3.4e-33 146.4 123 59.3
Cpa.g.sc90.42 Carica papaya HOM05D005964 ORTHO05D007242 1.1e-28 131.3 84 67.9
HPP92_021116 Vanilla planifolia HOM05D005964 ORTHO05D007242 4.8e-27 125.9 180 42.2
Ah.12g055850 Amaranthus hybridus HOM05D005964 ORTHO05D007242 6.2e-27 125.6 229 36.7
Mapoly0153s0025 Marchantia polymorpha HOM05D005964 ORTHO05D007242 7.1e-23 112.1 183 35.5
Pp3c6_11480 Physcomitrium patens HOM05D005964 ORTHO05D007242 3.7e-19 99.8 188 35.1
Haze_05991 Corylus avellana HOM05D005964 ORTHO05D007242 4.5e-17 92.8 152 40.8
Cpa.g.sc90.41 Carica papaya HOM05D005964 ORTHO05D007242 7.9e-14 82.0 59 62.7
AagrBONN_evm.TU.Sc2ySwM_344.1651 Anthoceros agrestis HOM05D005964 ORTHO05D007242 4.3e-12 76.3 91 45.1
Oeu042210.1 Olea europaea HOM05D005964 ORTHO05D007242 2.8e-11 73.6 47 63.8
Cpa.g.c47778 Carica papaya HOM05D005964 ORTHO05D007242 8.2e-11 72.0 42 66.7
CBR_g24057 Chara braunii HOM05D005964 ORTHO05D007242 1.7e-08 64.3 148 28.4
AL8G21390 Arabidopsis lyrata HOM05D005964 ORTHO05D007242 1.4e-07 61.2 41 56.1


User provided reference genes

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