Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_008111 Daucus carota HOM05D008179 ORTHO05D009362 1.1e-228 796.2 387 100.0
DCAR_008113 Daucus carota HOM05D008179 ORTHO05D009362 5.7e-148 528.1 356 76.7
DCAR_008110 Daucus carota HOM05D008179 ORTHO05D009362 2.0e-100 370.2 360 53.9
Lj1C1222G5 Lonicera japonica HOM05D008179 ORTHO05D009362 2.4e-69 266.9 354 44.4
Lj1C1222T5 Lonicera japonica HOM05D008179 ORTHO05D009362 1.3e-67 261.2 350 42.6
QL93p0073_1249 Quercus lobata HOM05D008179 ORTHO05D009362 2.9e-59 233.4 364 36.8
DCAR_008112 Daucus carota HOM05D008179 ORTHO05D009362 5.3e-53 212.6 224 54.5
Dinv18942 Davidia involucrata HOM05D008179 ORTHO05D009362 2.0e-52 210.7 276 44.2
Hma1.2p1_1682F.1_g297310 Hydrangea macrophylla HOM05D008179 ORTHO05D009362 6.1e-49 199.1 355 35.8
Dinv18943 Davidia involucrata HOM05D008179 ORTHO05D009362 1.8e-48 197.6 348 37.6
SGA_v2.0_scaffold7G03894 Striga asiatica HOM05D008179 ORTHO05D009362 5.3e-45 186.0 352 32.7
QL05p077156 Quercus lobata HOM05D008179 ORTHO05D009362 2.6e-44 183.7 362 32.3
SalBow8G3222 Salvia bowleyana HOM05D008179 ORTHO05D009362 2.9e-43 180.3 350 32.9
SGA_v2.0_scaffold114G32014 Striga asiatica HOM05D008179 ORTHO05D009362 8.5e-35 152.1 349 31.2
Prupe.4G130300 Prunus persica HOM05D008179 ORTHO05D009362 1.0e-32 145.2 365 31.5
Hma1.2p1_1682F.1_g297290 Hydrangea macrophylla HOM05D008179 ORTHO05D009362 6.8e-32 142.5 199 42.2
TAR624G0619 Trochodendron aralioides HOM05D008179 ORTHO05D009362 2.0e-31 141.0 368 31.0
Manes.11G148800 Manihot esculenta HOM05D008179 ORTHO05D009362 6.3e-30 136.0 345 31.9
Prupe.4G130000 Prunus persica HOM05D008179 ORTHO05D009362 5.3e-29 132.9 275 33.1
RcHm_v2.0_Chr5g0021181 Rosa chinensis HOM05D008179 ORTHO05D009362 9.1e-29 132.1 368 28.8
FAN15G0940 Fragaria x ananassa HOM05D008179 ORTHO05D009362 8.5e-27 125.6 379 30.3
Prupe.4G219800 Prunus persica HOM05D008179 ORTHO05D009362 8.5e-27 125.6 351 31.1
FAN14G5443 Fragaria x ananassa HOM05D008179 ORTHO05D009362 3.2e-26 123.6 266 29.7
Prupe.4G219900 Prunus persica HOM05D008179 ORTHO05D009362 5.5e-26 122.9 361 29.4
MD10G1311600 Malus domestica HOM05D008179 ORTHO05D009362 9.4e-26 122.1 366 29.0
MD05G1336000 Malus domestica HOM05D008179 ORTHO05D009362 2.3e-24 117.5 299 29.4
MD10G1212400 Malus domestica HOM05D008179 ORTHO05D009362 3.7e-22 110.2 287 28.2
RcHm_v2.0_Chr3g0478691 Rosa chinensis HOM05D008179 ORTHO05D009362 3.7e-22 110.2 376 28.7
FvH4_6g21740 Fragaria vesca HOM05D008179 ORTHO05D009362 1.1e-21 108.6 278 28.4
FAN14G0841 Fragaria x ananassa HOM05D008179 ORTHO05D009362 1.4e-21 108.2 278 28.8
RcHm_v2.0_Chr3g0479021 Rosa chinensis HOM05D008179 ORTHO05D009362 4.1e-21 106.7 281 29.9
SalBow6G4060 Salvia bowleyana HOM05D008179 ORTHO05D009362 2.7e-20 104.0 353 26.9
Manes.04G017200 Manihot esculenta HOM05D008179 ORTHO05D009362 5.9e-20 102.8 384 26.3
Manes.04G017300 Manihot esculenta HOM05D008179 ORTHO05D009362 7.7e-20 102.4 350 27.1
MD05G1336100 Malus domestica HOM05D008179 ORTHO05D009362 1.5e-18 98.2 363 26.4
Prupe.4G112200 Prunus persica HOM05D008179 ORTHO05D009362 1.9e-18 97.8 321 29.6
Oeu062972.1 Olea europaea HOM05D008179 ORTHO05D009362 7.2e-18 95.9 353 26.9
RcHm_v2.0_Chr5g0019881 Rosa chinensis HOM05D008179 ORTHO05D009362 2.8e-17 94.0 208 31.2
FAN05G4853 Fragaria x ananassa HOM05D008179 ORTHO05D009362 2.6e-15 87.4 188 31.4
RcHm_v2.0_Chr5g0004511 Rosa chinensis HOM05D008179 ORTHO05D009362 1.7e-14 84.7 358 29.9
FAN02G3878 Fragaria x ananassa HOM05D008179 ORTHO05D009362 1.1e-13 82.0 227 29.5
Dinv17850 Davidia involucrata HOM05D008179 ORTHO05D009362 1.2e-12 78.6 143 32.9
FAN05G1237 Fragaria x ananassa HOM05D008179 ORTHO05D009362 1.2e-12 78.6 195 28.7
FvH4_2g03910 Fragaria vesca HOM05D008179 ORTHO05D009362 2.0e-12 77.8 235 29.8
TAR371G0451 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.3e-11 75.1 298 27.2
Aqoxy3G03704 Aquilegia oxysepala HOM05D000007 ORTHO05D000676 1.1e-10 72.0 299 28.1
Rhsim08G0197100 Rhododendron simsii HOM05D000171 ORTHO05D000101 1.1e-10 72.0 307 24.4
TAR624G0498 Trochodendron aralioides HOM05D000007 ORTHO05D000017 3.3e-10 70.5 312 26.3
Dinv41199 Davidia involucrata HOM05D001519 ORTHO05D001403 9.5e-10 68.9 358 25.1
Nitab4.5_0009524g0010 Nicotiana tabacum HOM05D009034 ORTHO05D009362 9.5e-10 68.9 346 24.6
Thhalv10027439m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.6e-09 68.2 180 30.0
FAN07G2491 Fragaria x ananassa HOM05D000007 ORTHO05D009073 1.6e-09 68.2 175 30.9
Peaxi162Scf00016g00626 Petunia axillaris HOM05D009034 ORTHO05D009362 1.6e-09 68.2 215 27.9
Manes.18G107700 Manihot esculenta HOM05D007726 ORTHO05D008819 2.1e-09 67.8 229 25.3
TAR371G0533 Trochodendron aralioides HOM05D000007 ORTHO05D007252 2.1e-09 67.8 288 26.0
TAR629G0100 Trochodendron aralioides HOM05D008437 ORTHO05D008819 2.1e-09 67.8 279 25.8
Rhsim08G0210600 Rhododendron simsii HOM05D000171 ORTHO05D000101 3.6e-09 67.0 344 23.0
Nitab4.5_0003526g0010 Nicotiana tabacum HOM05D009034 ORTHO05D009362 4.7e-09 66.6 233 26.2
Dinv12850 Davidia involucrata HOM05D006664 ORTHO05D009007 8.0e-09 65.9 289 24.2
TAR371G0593 Trochodendron aralioides HOM05D000007 ORTHO05D007252 8.0e-09 65.9 310 24.2
Thhalv10026790m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.0e-08 65.5 318 24.8
SalBow4G3183 Salvia bowleyana HOM05D000007 ORTHO05D000017 1.0e-08 65.5 266 26.3
COL.COLO4_25856 Corchorus olitorius HOM05D000007 ORTHO05D000521 1.4e-08 65.1 325 23.7
Thecc.05G022700 Theobroma cacao HOM05D008437 ORTHO05D010577 1.4e-08 65.1 298 26.5
FAN27G1228 Fragaria x ananassa HOM05D008179 ORTHO05D009362 1.8e-08 64.7 167 31.7
Peaxi162Scf00263g00093 Petunia axillaris HOM05D009034 ORTHO05D009362 1.8e-08 64.7 183 26.2
Aa31sc52G30 Aethionema arabicum HOM05D000171 ORTHO05D000101 3.1e-08 63.9 323 21.4
BolC1t05729H Brassica oleracea HOM05D000171 ORTHO05D000101 3.1e-08 63.9 390 23.6
CiPaw.08G003800 Carya illinoinensis HOM05D007726 ORTHO05D008819 3.1e-08 63.9 225 25.3
Sopen01g051920 Solanum pennellii HOM05D009034 ORTHO05D009362 4.0e-08 63.5 318 24.2
Oeu000542.1 Olea europaea HOM05D007726 ORTHO05D008819 5.2e-08 63.2 260 24.2
Prupe.4G237500 Prunus persica HOM05D000007 ORTHO05D005026 5.2e-08 63.2 218 27.1
TAR575G0001 Trochodendron aralioides HOM05D008437 ORTHO05D008819 5.2e-08 63.2 307 24.4
TAR371G0448 Trochodendron aralioides HOM05D000007 ORTHO05D007252 8.9e-08 62.4 309 23.3
TAR627G1140 Trochodendron aralioides HOM05D000007 ORTHO05D000017 8.9e-08 62.4 221 24.9
Thhalv10003391m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.2e-07 62.0 281 23.1
Lj1A671T54 Lonicera japonica HOM05D000007 ORTHO05D000039 2.0e-07 61.2 244 25.4
Nitab4.5_0000308g0340 Nicotiana tabacum HOM05D009034 ORTHO05D009362 2.0e-07 61.2 182 26.9
Dinv17447 Davidia involucrata HOM05D000007 ORTHO05D000676 2.6e-07 60.8 241 27.0
THA.LOC104805854 Tarenaya hassleriana HOM05D000171 ORTHO05D000101 2.6e-07 60.8 303 24.1
TAR623G0051 Trochodendron aralioides HOM05D008437 ORTHO05D008819 2.6e-07 60.8 313 24.0
PSO210G7490 Papaver somniferum HOM05D000007 ORTHO05D000676 3.4e-07 60.5 250 28.4
Peaxi162Scf00001g04121 Petunia axillaris HOM05D000007 ORTHO05D013549 3.4e-07 60.5 261 27.2
TAR624G0935 Trochodendron aralioides HOM05D008179 ORTHO05D009362 3.4e-07 60.5 124 31.5
MD17G1124300 Malus domestica HOM05D000007 ORTHO05D000017 4.4e-07 60.1 234 26.5
Sabra11G0018900 Salix brachista HOM05D008179 ORTHO05D009362 4.4e-07 60.1 74 43.2
SalBow2G0242 Salvia bowleyana HOM05D003262 ORTHO05D003608 5.8e-07 59.7 251 25.5
PGSC0003DMG400042553 Solanum tuberosum HOM05D000007 ORTHO05D000017 5.8e-07 59.7 198 26.3
Actinidia26854 Actinidia chinensis HOM05D000007 ORTHO05D000017 7.5e-07 59.3 287 25.8
Nn1g09443 Nelumbo nucifera HOM05D007726 ORTHO05D008819 7.5e-07 59.3 283 25.1
TAR371G0292 Trochodendron aralioides HOM05D000007 ORTHO05D007252 7.5e-07 59.3 299 25.8
AL3G31620 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 9.8e-07 58.9 252 25.0
MSTRG.10148 Avicennia marina HOM05D000007 ORTHO05D000017 9.8e-07 58.9 244 25.4
C04p61810 Brassica napus HOM05D000171 ORTHO05D000101 9.8e-07 58.9 386 21.5
CSS0046565 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000017 9.8e-07 58.9 269 21.2
Medtr1g071010 Medicago truncatula HOM05D000007 ORTHO05D000017 9.8e-07 58.9 245 24.9
TAR381G1565 Trochodendron aralioides HOM05D007726 ORTHO05D008819 9.8e-07 58.9 259 25.9
FAN16G0437 Fragaria x ananassa HOM05D008179 ORTHO05D009362 1.3e-06 58.5 135 31.9
TAR371G0430 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.3e-06 58.5 299 25.4
COL.COLO4_25855 Corchorus olitorius HOM05D000007 ORTHO05D000521 1.7e-06 58.2 168 26.2
TAR624G0469 Trochodendron aralioides HOM05D000007 ORTHO05D000521 1.7e-06 58.2 242 25.6
BolC4t27664H Brassica oleracea HOM05D000171 ORTHO05D000101 2.2e-06 57.8 385 21.3
Dinv16551 Davidia involucrata HOM05D000171 ORTHO05D000101 2.2e-06 57.8 282 22.3
Gohir.A07G189800 Gossypium hirsutum HOM05D000007 ORTHO05D000521 2.2e-06 57.8 248 26.6
Nitab4.5_0009524g0020 Nicotiana tabacum HOM05D009034 ORTHO05D009362 2.2e-06 57.8 252 25.8
Aqoxy5G01823 Aquilegia oxysepala HOM05D000007 ORTHO05D000017 2.9e-06 57.4 253 27.3
arahy.Tifrunner.gnm1.ann1.HR5IAZ Arachis hypogaea HOM05D000007 ORTHO05D000017 2.9e-06 57.4 200 26.0
arahy.Tifrunner.gnm1.ann1.40BVCW Arachis hypogaea HOM05D000007 ORTHO05D000017 3.7e-06 57.0 189 25.4
MD15G1404600 Malus domestica HOM05D007726 ORTHO05D008819 3.7e-06 57.0 165 27.9
PSO017G7233 Papaver somniferum HOM05D000007 ORTHO05D000676 3.7e-06 57.0 183 25.7
PSO339G4553 Papaver somniferum HOM05D000007 ORTHO05D000017 3.7e-06 57.0 311 27.3
SGA_v2.0_scaffold157G37347 Striga asiatica HOM05D007162 ORTHO05D007631 3.7e-06 57.0 313 23.0
TAR381G1454 Trochodendron aralioides HOM05D000007 ORTHO05D000521 3.7e-06 57.0 268 25.7
CSS0013132 Camellia sinensis var. sinensis HOM05D007726 ORTHO05D008819 4.9e-06 56.6 296 22.6
CAN.G1904.1 Capsicum annuum HOM05D000007 ORTHO05D005385 4.9e-06 56.6 189 27.5
AUR62016246 Chenopodium quinoa HOM05D007162 ORTHO05D007631 4.9e-06 56.6 319 20.7
Gohir.D11G157600 Gossypium hirsutum HOM05D000007 ORTHO05D000521 4.9e-06 56.6 155 27.7
Peaxi162Scf00001g04112 Petunia axillaris HOM05D000007 ORTHO05D013549 4.9e-06 56.6 265 25.3
QL04p019096 Quercus lobata HOM05D000007 ORTHO05D000039 4.9e-06 56.6 291 22.7
Atru.chr3.1786 Acer truncatum HOM05D000007 ORTHO05D000017 6.4e-06 56.2 183 25.7
Aqoxy3G03706 Aquilegia oxysepala HOM05D015266 ORTHO05D007631 6.4e-06 56.2 246 25.2
AUR62032769 Chenopodium quinoa HOM05D007162 ORTHO05D007631 6.4e-06 56.2 319 20.7
FAN22G0489 Fragaria x ananassa HOM05D008179 ORTHO05D009362 6.4e-06 56.2 200 26.0
Nitab4.5_0001737g0020 Nicotiana tabacum HOM05D007560 ORTHO05D005947 6.4e-06 56.2 299 21.4
Atru.chr1.119 Acer truncatum HOM05D000007 ORTHO05D000017 8.3e-06 55.8 236 24.2
AT1G46984 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 8.3e-06 55.8 382 23.6
Carub.0006s1026 Capsella rubella HOM05D000171 ORTHO05D000101 8.3e-06 55.8 318 23.6
CAN.G1607.2 Capsicum annuum HOM05D000002 ORTHO05D005385 8.3e-06 55.8 189 27.5
QL04p019070 Quercus lobata HOM05D000007 ORTHO05D000039 8.3e-06 55.8 245 22.0
Rhsim03G0071300 Rhododendron simsii HOM05D000171 ORTHO05D004496 8.3e-06 55.8 270 22.6
VMungo0540G1379 Vigna mungo HOM05D007162 ORTHO05D007631 8.3e-06 55.8 315 21.9


User provided reference genes

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