Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_008048 Daucus carota HOM05D003782 ORTHO05D004361 0.0e+00 1791.2 957 100.0
Actinidia05612 Actinidia chinensis HOM05D003782 ORTHO05D004361 1.8e-259 899.8 972 55.7
Hma1.2p1_0881F.1_g231940 Hydrangea macrophylla HOM05D003782 ORTHO05D004361 5.6e-253 878.2 983 55.5
Dinv07533 Davidia involucrata HOM05D003782 ORTHO05D004361 6.4e-249 864.8 955 55.7
CSS0005863 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 1.3e-246 857.1 975 54.3
vmacro03847 Vaccinium macrocarpon HOM05D003782 ORTHO05D004361 1.1e-237 827.4 1050 51.1
Sopen02g023410 Solanum pennellii HOM05D003782 ORTHO05D004361 2.6e-234 816.2 986 53.5
CSS0007425 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 9.2e-232 807.7 952 53.0
Nitab4.5_0011233g0010 Nicotiana tabacum HOM05D003782 ORTHO05D004361 1.3e-230 803.9 981 52.8
RhsimUnG0044200 Rhododendron simsii HOM05D003782 ORTHO05D004361 1.5e-226 790.4 1154 47.5
GSVIVG01006449001 Vitis vinifera HOM05D003782 ORTHO05D004361 5.8e-226 788.5 988 50.0
Lj1C1208G1 Lonicera japonica HOM05D003782 ORTHO05D004361 9.9e-226 787.7 961 52.3
Cc02_g13030 Coffea canephora HOM05D003782 ORTHO05D004361 1.4e-224 783.9 808 57.7
Cfa000411 Carpinus fangiana HOM05D003782 ORTHO05D004361 7.1e-224 781.6 978 50.6
CAN.G1627.12 Capsicum annuum HOM05D003782 ORTHO05D004361 2.1e-223 780.0 976 52.6
Peaxi162Scf00379g00065 Petunia axillaris HOM05D003782 ORTHO05D004361 4.6e-223 778.9 954 54.0
Haze_06504 Corylus avellana HOM05D003782 ORTHO05D004361 1.7e-222 776.9 967 50.9
CiPaw.09G056900 Carya illinoinensis HOM05D003782 ORTHO05D004361 1.5e-221 773.9 805 56.8
Solyc02g078560.4 Solanum lycopersicum HOM05D003782 ORTHO05D004361 8.1e-220 768.1 812 57.9
Manes.17G043000 Manihot esculenta HOM05D003782 ORTHO05D004361 1.1e-219 767.7 985 51.1
Oeu014694.1 Olea europaea HOM05D003782 ORTHO05D004361 4.0e-219 765.8 1007 49.7
QL05p039400 Quercus lobata HOM05D003782 ORTHO05D004361 4.4e-218 762.3 791 57.1
Atru.chr10.1947 Acer truncatum HOM05D003782 ORTHO05D004361 2.4e-216 756.5 1003 49.2
Dinv40534 Davidia involucrata HOM05D003782 ORTHO05D004361 5.4e-216 755.4 739 59.7
Lsat_1_v5_gn_7_19080 Lactuca sativa HOM05D003782 ORTHO05D004361 6.6e-214 748.4 924 50.9
Potri.011G049300 Populus trichocarpa HOM05D003782 ORTHO05D004361 3.3e-213 746.1 795 55.5
HanXRQChr04g0124181 Helianthus annuus HOM05D003782 ORTHO05D004361 4.8e-212 742.3 793 55.6
ClCG03G005890 Citrullus lanatus HOM05D003782 ORTHO05D004361 1.4e-211 740.7 997 48.8
CsaV3_1G012120 Cucumis sativus L. HOM05D003782 ORTHO05D004361 1.3e-209 734.2 973 48.8
Potri.004G039900 Populus trichocarpa HOM05D003782 ORTHO05D004361 2.9e-209 733.0 814 55.4
Nitab4.5_0003668g0120 Nicotiana tabacum HOM05D003782 ORTHO05D004361 1.1e-208 731.1 988 49.6
Migut.H01508 Erythranthe guttata HOM05D003782 ORTHO05D004361 1.9e-208 730.3 1025 49.4
CiPaw.10G046700 Carya illinoinensis HOM05D003782 ORTHO05D004361 3.2e-208 729.6 786 55.7
Sabra11G0033700 Salix brachista HOM05D003782 ORTHO05D004361 1.3e-206 724.2 812 54.3
Glyma.07G194500 Glycine max HOM05D003782 ORTHO05D004361 1.1e-205 721.1 978 47.8
Glyma.13G181800 Glycine max HOM05D003782 ORTHO05D004361 3.3e-205 719.5 806 53.6
TAR624G0538 Trochodendron aralioides HOM05D003782 ORTHO05D003724 4.3e-205 719.2 804 54.6
Ciclev10014178m.g Citrus clementina HOM05D003782 ORTHO05D004361 2.1e-204 716.8 857 51.2
Thecc.06G191300 Theobroma cacao HOM05D003782 ORTHO05D004361 4.8e-204 715.7 987 47.3
MSTRG.14684 Avicennia marina HOM05D003782 ORTHO05D004361 4.0e-203 712.6 1050 46.9
Sed0005800 Sechium edule HOM05D003782 ORTHO05D004361 5.3e-203 712.2 1022 46.5
CANSAT35G1194 Cannabis sativa HOM05D003782 ORTHO05D004361 9.0e-203 711.4 785 54.0
MD05G1316600 Malus domestica HOM05D003782 ORTHO05D004361 2.6e-202 709.9 822 53.2
Manes.16G025200 Manihot esculenta HOM05D003782 ORTHO05D004361 4.5e-202 709.1 990 47.5
MD10G1297100 Malus domestica HOM05D003782 ORTHO05D004361 2.2e-201 706.8 821 53.0
arahy.Tifrunner.gnm1.ann1.2GZF7Z Arachis hypogaea HOM05D003782 ORTHO05D004361 4.9e-201 705.7 987 46.8
Phvul.002G226800 Phaseolus vulgaris HOM05D003782 ORTHO05D004361 6.5e-201 705.3 808 53.0
HanXRQChr08g0209481 Helianthus annuus HOM05D003782 ORTHO05D004361 1.1e-200 704.5 884 50.6
arahy.Tifrunner.gnm1.ann1.1A97AW Arachis hypogaea HOM05D003782 ORTHO05D004361 2.5e-200 703.4 981 46.7
Lj4g0027811 Lotus japonicus HOM05D003782 ORTHO05D004361 3.2e-200 703.0 850 50.2
Sc05g0007840 Simmondsia chinensis HOM05D003782 ORTHO05D004361 4.2e-200 702.6 1044 46.0
MBI17_g03751_MAGBIO Magnolia biondii HOM05D003782 ORTHO05D004361 1.2e-199 701.0 987 47.8
Prupe.4G043300 Prunus persica HOM05D003782 ORTHO05D004361 1.2e-199 701.0 840 53.0
Lalb_Chr05g0218361 Lupinus albus HOM05D003782 ORTHO05D004361 3.5e-199 699.5 797 52.2
RcHm_v2.0_Chr5g0007891 Rosa chinensis HOM05D003782 ORTHO05D004361 6.0e-199 698.7 815 53.1
Duzib160G0524 Durio zibethinus HOM05D003782 ORTHO05D004361 1.0e-198 698.0 982 47.6
FAN16G0824 Fragaria x ananassa HOM05D003782 ORTHO05D004361 2.3e-198 696.8 850 51.4
VMungo0251G3691 Vigna mungo HOM05D003782 ORTHO05D004361 2.5e-197 693.3 802 52.4
SalBow8G2382 Salvia bowleyana HOM05D003782 ORTHO05D004361 1.1e-195 688.0 1072 45.3
FAN11G2511 Fragaria x ananassa HOM05D003782 ORTHO05D004361 2.4e-195 686.8 867 49.7
FAN21G1192 Fragaria x ananassa HOM05D003782 ORTHO05D004361 5.3e-195 685.6 869 50.1
Gohir.D06G130600 Gossypium hirsutum HOM05D003782 ORTHO05D004361 6.9e-195 685.3 982 47.0
FvH4_3g04800 Fragaria vesca HOM05D003782 ORTHO05D004361 9.0e-195 684.9 868 49.7
PGR042G3934 Punica granatum HOM05D003782 ORTHO05D004361 4.5e-194 682.6 846 50.1
FAN25G2149 Fragaria x ananassa HOM05D003782 ORTHO05D004361 7.6e-194 681.8 851 50.4
TWI38G1173 Tripterygium wilfordii HOM05D003782 ORTHO05D004361 8.5e-193 678.3 809 53.2
Aqoxy4G01073 Aquilegia oxysepala HOM05D003782 ORTHO05D004361 1.4e-192 677.6 847 50.1
Gohir.A06G209800 Gossypium hirsutum HOM05D003782 ORTHO05D004361 2.1e-191 673.7 978 47.2
SGA_v2.0_scaffold49G18282 Striga asiatica HOM05D003782 ORTHO05D004361 1.3e-190 671.0 1011 45.4
Eucgr.E03352 Eucalyptus grandis HOM05D003782 ORTHO05D004361 6.7e-190 668.7 808 53.3
Gohir.A06G125300 Gossypium hirsutum HOM05D003782 ORTHO05D004361 2.5e-189 666.8 982 46.4
Lalb_Chr09g0327561 Lupinus albus HOM05D003782 ORTHO05D004361 2.5e-189 666.8 790 51.0
Gohir.D06G211200 Gossypium hirsutum HOM05D003782 ORTHO05D004361 5.7e-189 665.6 978 46.9
Gorai.010G255000 Gossypium raimondii HOM05D003782 ORTHO05D004361 1.1e-187 661.4 978 46.8
COL.COLO4_31507 Corchorus olitorius HOM05D003782 ORTHO05D004361 2.4e-187 660.2 1097 43.0
TPR.G12054 Trifolium pratense HOM05D003782 ORTHO05D004361 3.1e-187 659.8 1064 43.0
Medtr4g089015 Medicago truncatula HOM05D003782 ORTHO05D004361 9.0e-187 658.3 1070 43.1
MELO3C002586.2 Cucumis melo HOM05D003782 ORTHO05D004361 4.5e-186 656.0 1035 44.8
BcaC05g24980 Brassica carinata HOM05D003782 ORTHO05D004361 2.3e-182 643.7 794 49.4
C08p48360 Brassica napus HOM05D003782 ORTHO05D004361 9.1e-179 631.7 807 48.8
BolC8t52375H Brassica oleracea HOM05D003782 ORTHO05D004361 9.1e-179 631.7 807 48.8
Psat7g113440 Pisum sativum HOM05D003782 ORTHO05D004361 1.5e-178 630.9 1089 41.0
Gorai.010G152400 Gossypium raimondii HOM05D003782 ORTHO05D004361 2.0e-178 630.6 980 44.7
BraA06t23977Z Brassica rapa HOM05D003782 ORTHO05D004361 3.4e-178 629.8 800 48.2
EL10Ac8g20337 Beta vulgaris HOM05D003782 ORTHO05D004361 4.5e-178 629.4 803 50.1
A06p07760 Brassica napus HOM05D003782 ORTHO05D004361 7.7e-178 628.6 800 48.2
C05p09350 Brassica napus HOM05D003782 ORTHO05D004361 1.3e-177 627.9 795 48.7
CARHR011250 Cardamine hirsuta HOM05D003782 ORTHO05D004361 5.5e-176 622.5 788 48.1
Sp1g09750 Schrenkiella parvula HOM05D003782 ORTHO05D004361 2.7e-175 620.2 808 47.4
CDE02G2556 Ceratophyllum demersum HOM05D003782 ORTHO05D004361 4.7e-175 619.4 979 43.7
BolC5t29675H Brassica oleracea HOM05D003782 ORTHO05D004361 1.0e-174 618.2 823 47.5
Sed0026382 Sechium edule HOM05D003782 ORTHO05D004361 1.4e-174 617.8 807 48.5
SalBow7G0940 Salvia bowleyana HOM05D003782 ORTHO05D004361 5.2e-174 615.9 845 47.7
SalBow7G0271 Salvia bowleyana HOM05D003782 ORTHO05D004361 1.5e-173 614.4 845 47.6
BraA09t41812Z Brassica rapa HOM05D003782 ORTHO05D004361 5.7e-173 612.5 874 44.9
Carub.0001s1062 Capsella rubella HOM05D003782 ORTHO05D004361 1.3e-172 611.3 824 47.5
A09p64830 Brassica napus HOM05D003782 ORTHO05D004361 2.2e-172 610.5 873 45.2
Thhalv10006765m.g Eutrema salsugineum HOM05D003782 ORTHO05D004361 2.2e-172 610.5 816 47.1
AL1G22040 Arabidopsis lyrata HOM05D003782 ORTHO05D004361 4.8e-172 609.4 820 46.8
Sp2g03490 Schrenkiella parvula HOM05D003782 ORTHO05D004361 3.1e-171 606.7 789 47.7
PSO210G1870 Papaver somniferum HOM05D003782 ORTHO05D004361 4.1e-171 606.3 1075 41.8
Aa31LG1G3850 Aethionema arabicum HOM05D003782 ORTHO05D004361 9.1e-171 605.1 841 45.9
AT1G61030 Arabidopsis thaliana HOM05D003782 ORTHO05D004361 1.2e-170 604.7 791 46.9
AUR62016973 Chenopodium quinoa HOM05D003782 ORTHO05D004361 2.6e-170 603.6 796 48.9
AUR62014785 Chenopodium quinoa HOM05D003782 ORTHO05D004361 3.5e-170 603.2 858 47.1
AL2G15410 Arabidopsis lyrata HOM05D003782 ORTHO05D004361 2.9e-169 600.1 787 47.3
PSO832G0898 Papaver somniferum HOM05D003782 ORTHO05D004361 5.5e-168 595.9 1075 41.4
AT1G11060 Arabidopsis thaliana HOM05D003782 ORTHO05D004361 7.2e-168 595.5 820 46.2
arahy.Tifrunner.gnm1.ann1.HPML60 Arachis hypogaea HOM05D003782 ORTHO05D004361 7.2e-168 595.5 806 47.5
Ca_18527_v3 Cicer arietinum L. HOM05D003782 ORTHO05D004361 1.5e-165 587.8 967 43.5
BcaC07g41789 Brassica carinata HOM05D003782 ORTHO05D004361 2.6e-165 587.0 833 46.5
arahy.Tifrunner.gnm1.ann1.AS4EHM Arachis hypogaea HOM05D003782 ORTHO05D004361 3.3e-165 586.6 806 46.8
ATR0680G033 Amborella trichopoda HOM05D003782 ORTHO05D004361 2.8e-164 583.6 985 43.1
Ah.14g089260 Amaranthus hybridus HOM05D003782 ORTHO05D004361 6.3e-164 582.4 820 47.4
Carub.0002s0417 Capsella rubella HOM05D003782 ORTHO05D004361 3.5e-162 576.6 793 46.7
CARHR052160 Cardamine hirsuta HOM05D003782 ORTHO05D004361 1.7e-161 574.3 791 46.1
HPP92_014533 Vanilla planifolia HOM05D003782 ORTHO05D004361 1.5e-160 571.2 808 44.7
Hund23698 Selenicereus undatus HOM05D003782 ORTHO05D004361 3.2e-160 570.1 779 48.0
Lj6g0013812 Lotus japonicus HOM05D003782 ORTHO05D004361 4.2e-160 569.7 784 45.8
Aa31LG2G9560 Aethionema arabicum HOM05D003782 ORTHO05D004361 2.0e-154 550.8 801 44.8
Lalb_Chr20g0122011 Lupinus albus HOM05D003782 ORTHO05D004361 1.8e-150 537.7 773 45.7
Zm00001eb220930 Zea mays HOM05D003782 ORTHO05D004361 4.0e-150 536.6 798 44.2
Sabra04G0024600 Salix brachista HOM05D003782 ORTHO05D004361 1.5e-149 534.6 690 51.0
Os10g0497000 Oryza sativa ssp. japonica HOM05D003782 ORTHO05D004361 6.3e-148 529.3 818 43.5
Ah.09g235740 Amaranthus hybridus HOM05D003782 ORTHO05D004361 1.5e-141 508.1 822 44.4
Duzib235G1248 Durio zibethinus HOM05D003782 ORTHO05D004361 1.9e-136 491.1 984 39.4
Duzib192G0241 Durio zibethinus HOM05D003782 ORTHO05D004361 2.5e-136 490.7 990 39.6
Migut.M01185 Erythranthe guttata HOM05D003782 ORTHO05D004361 3.2e-131 473.8 981 37.8
unitig_26.g9369 Utricularia gibba HOM05D003782 ORTHO05D004361 5.4e-131 473.0 997 39.2
ECA236G4595 Erigeron canadensis HOM05D003782 ORTHO05D004361 1.1e-118 432.2 542 51.3
Pp3c9_20340 Physcomitrium patens HOM05D003782 ORTHO05D004361 1.8e-110 404.8 798 36.2
Pp3c9_20349 Physcomitrium patens HOM05D003782 ORTHO05D004361 1.8e-110 404.8 798 36.2
Mapoly0014s0099 Marchantia polymorpha HOM05D003782 ORTHO05D004361 6.4e-108 396.4 889 35.8
Zm00001eb044640 Zea mays HOM05D003782 ORTHO05D004361 5.3e-102 376.7 662 41.2
SMO169G0190 Selaginella moellendorffii HOM05D003782 ORTHO05D004361 4.2e-99 367.1 770 36.1
Aqoxy6G00197 Aquilegia oxysepala HOM05D003782 ORTHO05D004361 4.2e-83 313.9 337 54.9
Cpa.g.sc27.74 Carica papaya HOM05D003782 ORTHO05D004361 6.7e-81 306.6 425 45.6
FAN07G0886 Fragaria x ananassa HOM05D003782 ORTHO05D004361 2.5e-75 288.1 288 55.9
CSS0036804 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 1.8e-73 282.0 374 48.9
Oeu043706.1 Olea europaea HOM05D003782 ORTHO05D004361 1.5e-72 278.9 379 50.1
Lj6g0001672 Lotus japonicus HOM05D003782 ORTHO05D004361 1.1e-70 272.7 368 48.4
CBR_g19729 Chara braunii HOM05D003782 ORTHO05D004361 7.9e-66 256.5 969 27.5
SEGI_34470 Sequoiadendron giganteum HOM05D003782 ORTHO05D004361 4.5e-61 240.7 251 55.0
SHI01818 Sapria himalayana HOM05D003782 ORTHO05D004361 3.2e-51 208.0 370 39.5
Lj6g0027699 Lotus japonicus HOM05D003782 ORTHO05D004361 1.0e-44 186.4 258 42.6
Sabra04G0024500 Salix brachista HOM05D003782 ORTHO05D004361 3.8e-44 184.5 137 73.0
ECA236G3594 Erigeron canadensis HOM05D003782 ORTHO05D004361 6.8e-33 147.1 103 75.7
TWI12G0412 Tripterygium wilfordii HOM05D003782 ORTHO05D004361 1.2e-29 136.3 199 46.2
Cpa.g.sc27.75 Carica papaya HOM05D003782 ORTHO05D004361 1.0e-28 133.3 471 31.0
SEGI_13110 Sequoiadendron giganteum HOM05D003782 ORTHO05D004361 1.3e-28 132.9 240 36.7
Zm00001eb006190 Zea mays HOM05D003782 ORTHO05D004361 1.9e-27 129.0 155 42.6
TWI12G0828 Tripterygium wilfordii HOM05D003782 ORTHO05D004361 2.5e-27 128.6 162 50.6
FAN28G2813 Fragaria x ananassa HOM05D003782 ORTHO05D004361 3.3e-27 128.3 92 73.9
BcaC05g24978 Brassica carinata HOM05D003782 ORTHO05D004361 1.6e-26 125.9 96 67.7
arahy.Tifrunner.gnm1.ann1.M5G8HU Arachis hypogaea HOM05D003782 ORTHO05D004361 1.0e-25 123.2 86 74.4
arahy.Tifrunner.gnm1.ann1.04J95Q Arachis hypogaea HOM05D003782 ORTHO05D004361 3.0e-25 121.7 113 57.5
arahy.Tifrunner.gnm1.ann1.S76ADD Arachis hypogaea HOM05D001687 ORTHO05D001608 3.2e-22 111.7 79 74.7
MD09G1213100 Malus domestica HOM05D003782 ORTHO05D004361 6.6e-20 104.0 71 69.0
arahy.Tifrunner.gnm1.ann1.IMK82Y Arachis hypogaea HOM05D003782 ORTHO05D004361 4.3e-19 101.3 71 73.2
Zm00001eb335960 Zea mays HOM05D003782 ORTHO05D004361 5.6e-19 100.9 122 42.6
Zm00001eb432110 Zea mays HOM05D003782 ORTHO05D004361 1.1e-17 96.7 89 56.2
Zm00001eb179180 Zea mays HOM05D003782 ORTHO05D004361 4.4e-16 91.3 89 53.9
arahy.Tifrunner.gnm1.ann1.R5EEB5 Arachis hypogaea HOM05D003782 ORTHO05D004361 5.8e-16 90.9 107 45.8
Nn1g04009 Nelumbo nucifera HOM05D003782 ORTHO05D004361 2.1e-13 82.4 75 64.0
QL05p013418 Quercus lobata HOM05D003782 ORTHO05D004361 2.7e-13 82.0 69 68.1
CSS0006007 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 3.5e-13 81.6 60 73.3
VMungo0251G1485 Vigna mungo HOM05D003782 ORTHO05D004361 4.6e-13 81.3 68 63.2
VMungo0331G2027 Vigna mungo HOM05D003782 ORTHO05D004361 1.3e-12 79.7 65 66.2
ATR0561G103 Amborella trichopoda HOM05D003782 ORTHO05D004361 5.0e-12 77.8 125 47.2
SHI01816 Sapria himalayana HOM05D005377 ORTHO05D003034 6.6e-12 77.4 88 51.1
TAR626G0244 Trochodendron aralioides HOM05D003782 ORTHO05D004361 6.6e-12 77.4 68 54.4
TAR624G1003 Trochodendron aralioides HOM05D003782 ORTHO05D004361 1.6e-10 72.8 102 47.1
Zm00001eb208870 Zea mays HOM05D000229 ORTHO05D004361 6.2e-10 70.9 126 38.1
CARHR034020 Cardamine hirsuta HOM05D003782 ORTHO05D004361 5.2e-09 67.8 78 47.4
Zm00001eb174580 Zea mays HOM05D003782 ORTHO05D004361 5.2e-09 67.8 64 50.0
CSS0040150 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 6.8e-09 67.4 45 80.0
arahy.Tifrunner.gnm1.ann1.IG0W9M Arachis hypogaea HOM05D003782 ORTHO05D004361 4.4e-08 64.7 100 40.0
CSS0046083 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 3.7e-07 61.6 204 32.4
Zm00001eb032810 Zea mays HOM05D003782 ORTHO05D004361 8.3e-07 60.5 64 46.9
Glyma.04G160500 Glycine max HOM05D003782 ORTHO05D004361 7.1e-06 57.4 86 34.9
QL11p045598 Quercus lobata HOM05D005703 ORTHO05D006643 7.1e-06 57.4 57 64.9


User provided reference genes

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