Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_008032 Daucus carota HOM05D007285 ORTHO05D009224 3.5e-50 201.4 110 100.0
Rhsim02G0132100 Rhododendron simsii HOM05D007285 ORTHO05D009224 1.7e-33 146.0 102 77.5
Actinidia07587 Actinidia chinensis HOM05D007285 ORTHO05D009224 2.3e-33 145.6 102 78.4
Hma1.2p1_0208F.1_g088230 Hydrangea macrophylla HOM05D007285 ORTHO05D009224 1.5e-32 142.9 108 71.3
CSS0032734 Camellia sinensis var. sinensis HOM05D007285 ORTHO05D009224 4.3e-32 141.4 102 75.5
Dinv40575 Davidia involucrata HOM05D007285 ORTHO05D009224 2.3e-30 135.6 102 71.6
MSTRG.7339 Avicennia marina HOM05D007285 ORTHO05D009224 4.0e-30 134.8 109 67.0
Lsat_1_v5_gn_4_52261 Lactuca sativa HOM05D007285 ORTHO05D009224 4.0e-30 134.8 108 70.4
Migut.M01131 Erythranthe guttata HOM05D007285 ORTHO05D009224 5.2e-30 134.4 108 68.5
SGA_v2.0_scaffold100G29692 Striga asiatica HOM05D007285 ORTHO05D009224 5.2e-30 134.4 109 69.7
Actinidia26129 Actinidia chinensis HOM05D007285 ORTHO05D009224 6.8e-30 134.0 102 73.5
Cc02_g13540 Coffea canephora HOM05D007285 ORTHO05D009224 2.6e-29 132.1 106 66.0
COL.COLO4_31450 Corchorus olitorius HOM05D007285 ORTHO05D009224 7.5e-29 130.6 102 71.6
HanXRQChr14g0435131 Helianthus annuus HOM05D007285 ORTHO05D009224 2.9e-28 128.6 94 73.4
CsaV3_1G012400 Cucumis sativus L. HOM05D007285 ORTHO05D009224 3.7e-28 128.3 109 67.9
Dinv17325 Davidia involucrata HOM05D007285 ORTHO05D009224 3.7e-28 128.3 102 69.6
Nitab4.5_0005745g0020 Nicotiana tabacum HOM05D007285 ORTHO05D009224 3.7e-28 128.3 109 63.3
Thecc.06G185100 Theobroma cacao HOM05D007285 ORTHO05D009224 4.9e-28 127.9 101 70.3
CiPaw.09G061300 Carya illinoinensis HOM05D007285 ORTHO05D009224 8.3e-28 127.1 109 63.3
unitig_27.g24965 Utricularia gibba HOM05D007285 ORTHO05D009224 8.3e-28 127.1 99 67.7
Nn1g04136 Nelumbo nucifera HOM05D007285 ORTHO05D009224 1.1e-27 126.7 97 70.1
Ca_18554_v3 Cicer arietinum L. HOM05D007285 ORTHO05D009224 1.4e-27 126.3 93 73.1
Peaxi162Scf00623g00519 Petunia axillaris HOM05D007285 ORTHO05D009224 1.9e-27 125.9 108 63.9
SalBow8G5072 Salvia bowleyana HOM05D007285 ORTHO05D009224 2.4e-27 125.6 102 69.6
Sopen02g022850 Solanum pennellii HOM05D007285 ORTHO05D009224 2.4e-27 125.6 109 64.2
PSO541G0778 Papaver somniferum HOM05D007285 ORTHO05D009224 3.2e-27 125.2 106 63.2
Hund23773 Selenicereus undatus HOM05D007285 ORTHO05D009224 3.2e-27 125.2 102 67.6
Solyc02g078010.4 Solanum lycopersicum HOM05D007285 ORTHO05D009224 3.2e-27 125.2 109 64.2
Gorai.010G155100 Gossypium raimondii HOM05D007285 ORTHO05D009224 5.4e-27 124.4 101 68.3
Medtr4g088680 Medicago truncatula HOM05D007285 ORTHO05D009224 1.2e-26 123.2 97 70.1
Psat7g114520 Pisum sativum HOM05D007285 ORTHO05D009224 1.2e-26 123.2 97 70.1
TAR626G1757 Trochodendron aralioides HOM05D007285 ORTHO05D009224 1.2e-26 123.2 102 65.7
TPR.G16329 Trifolium pratense HOM05D007285 ORTHO05D009224 1.6e-26 122.9 101 67.3
TWI38G2229 Tripterygium wilfordii HOM05D007285 ORTHO05D009224 1.6e-26 122.9 101 65.3
ClCG03G008150 Citrullus lanatus HOM05D007285 ORTHO05D009224 2.1e-26 122.5 102 67.6
Gohir.D06G133300 Gossypium hirsutum HOM05D007285 ORTHO05D009224 2.1e-26 122.5 101 67.3
Potri.004G045400 Populus trichocarpa HOM05D007285 ORTHO05D009224 4.6e-26 121.3 95 67.4
Sed0001788 Sechium edule HOM05D007285 ORTHO05D009224 6.0e-26 120.9 102 66.7
Atru.chr10.1858 Acer truncatum HOM05D007285 ORTHO05D009224 7.8e-26 120.6 101 66.3
EL10Ac8g20395 Beta vulgaris HOM05D007285 ORTHO05D009224 7.8e-26 120.6 102 63.7
AUR62017028 Chenopodium quinoa HOM05D007285 ORTHO05D009224 7.8e-26 120.6 102 64.7
FvH4_3g08990 Fragaria vesca HOM05D007285 ORTHO05D009224 7.8e-26 120.6 101 65.3
FAN16G1611 Fragaria x ananassa HOM05D007285 ORTHO05D009224 7.8e-26 120.6 101 65.3
FAN21G1653 Fragaria x ananassa HOM05D007285 ORTHO05D009224 7.8e-26 120.6 101 65.3
CAN.G529.14 Capsicum annuum HOM05D007285 ORTHO05D009224 1.0e-25 120.2 103 65.0
MD10G1292600 Malus domestica HOM05D007285 ORTHO05D009224 1.7e-25 119.4 93 68.8
Prupe.4G049200 Prunus persica HOM05D007285 ORTHO05D009224 1.7e-25 119.4 101 64.4
RcHm_v2.0_Chr5g0008721 Rosa chinensis HOM05D007285 ORTHO05D009224 1.7e-25 119.4 110 62.7
Sc05g0007570 Simmondsia chinensis HOM05D007285 ORTHO05D009224 1.7e-25 119.4 101 64.4
VMungo0251G0987 Vigna mungo HOM05D007285 ORTHO05D009224 1.7e-25 119.4 93 73.1
FAN25G3510 Fragaria x ananassa HOM05D007285 ORTHO05D009224 2.3e-25 119.0 93 67.7
arahy.Tifrunner.gnm1.ann1.J7N80D Arachis hypogaea HOM05D007285 ORTHO05D009224 3.9e-25 118.2 99 66.7
arahy.Tifrunner.gnm1.ann1.VSLT1W Arachis hypogaea HOM05D007285 ORTHO05D009224 3.9e-25 118.2 99 66.7
MD00G1116000 Malus domestica HOM05D007285 ORTHO05D009224 3.9e-25 118.2 93 66.7
Ciclev10017252m.g Citrus clementina HOM05D007285 ORTHO05D009224 5.1e-25 117.9 101 67.3
Glyma.07G198400 Glycine max HOM05D007285 ORTHO05D009224 6.6e-25 117.5 97 70.1
Gohir.A06G129300 Gossypium hirsutum HOM05D007285 ORTHO05D009224 6.6e-25 117.5 101 65.3
Lalb_Chr15g0089751 Lupinus albus HOM05D007285 ORTHO05D009224 6.6e-25 117.5 109 63.3
Manes.17G046800 Manihot esculenta HOM05D007285 ORTHO05D009224 6.6e-25 117.5 92 71.7
Ah.09g237440 Amaranthus hybridus HOM05D007285 ORTHO05D009224 1.5e-24 116.3 102 59.8
TWI63G1057 Tripterygium wilfordii HOM05D007285 ORTHO05D009224 1.5e-24 116.3 101 63.4
Sed0014393 Sechium edule HOM05D007285 ORTHO05D009224 1.9e-24 115.9 102 62.7
Glyma.13G178000 Glycine max HOM05D007285 ORTHO05D009224 3.3e-24 115.2 101 67.3
DCAR_004065 Daucus carota HOM05D007285 ORTHO05D009224 9.5e-24 113.6 83 79.5
Eucgr.E03264 Eucalyptus grandis HOM05D007285 ORTHO05D009224 9.5e-24 113.6 102 63.7
Aa31LG6G10160 Aethionema arabicum HOM05D007285 ORTHO05D009224 2.1e-23 112.5 95 61.1
Phvul.002G229600 Phaseolus vulgaris HOM05D007285 ORTHO05D009224 2.1e-23 112.5 93 69.9
Carub.0001s2669 Capsella rubella HOM05D007285 ORTHO05D009224 2.8e-23 112.1 101 57.4
PGR042G2867 Punica granatum HOM05D007285 ORTHO05D009224 2.8e-23 112.1 100 62.0
CARHR027740 Cardamine hirsuta HOM05D007285 ORTHO05D009224 6.2e-23 110.9 97 59.8
AL1G41800 Arabidopsis lyrata HOM05D007285 ORTHO05D009224 8.9e-22 107.1 94 58.5
BolC3t19748H Brassica oleracea HOM05D007285 ORTHO05D009224 1.2e-21 106.7 94 59.6
CANSAT35G0751 Cannabis sativa HOM05D007285 ORTHO05D009224 1.2e-21 106.7 100 57.0
AT1G28250 Arabidopsis thaliana HOM05D007285 ORTHO05D009224 1.5e-21 106.3 94 58.5
THA.LOC104820545 Tarenaya hassleriana HOM05D007285 ORTHO05D009224 1.5e-21 106.3 110 56.4
Lj4g0016922 Lotus japonicus HOM05D007285 ORTHO05D009224 2.0e-21 105.9 107 60.7
vmacro15913 Vaccinium macrocarpon HOM05D007285 ORTHO05D009224 2.6e-21 105.5 83 73.5
ECA234G4273 Erigeron canadensis HOM05D007285 ORTHO05D009224 5.8e-21 104.4 78 73.1
BcaC05g26830 Brassica carinata HOM05D007285 ORTHO05D009224 2.9e-20 102.1 97 54.6
BcaB07g32433 Brassica carinata HOM05D007285 ORTHO05D009224 3.8e-20 101.7 94 55.3
A09p37820 Brassica napus HOM05D007285 ORTHO05D009224 3.8e-20 101.7 97 54.6
C05p27060 Brassica napus HOM05D007285 ORTHO05D009224 3.8e-20 101.7 97 54.6
BraA09t39294Z Brassica rapa HOM05D007285 ORTHO05D009224 3.8e-20 101.7 97 54.6
Thhalv10009792m.g Eutrema salsugineum HOM05D007285 ORTHO05D009224 3.8e-20 101.7 103 55.3
Haze_06424 Corylus avellana HOM05D007285 ORTHO05D009224 6.4e-20 100.9 82 69.5
QL05p041285 Quercus lobata HOM05D007285 ORTHO05D009224 1.1e-19 100.1 78 70.5
Sabra04G0028300 Salix brachista HOM05D007285 ORTHO05D009224 1.1e-19 100.1 147 43.5
CDE01G0551 Ceratophyllum demersum HOM05D007285 ORTHO05D009224 4.1e-19 98.2 89 59.6
HPP92_007016 Vanilla planifolia HOM05D007285 ORTHO05D009224 5.4e-19 97.8 88 61.4
PGSC0003DMG401029703 Solanum tuberosum HOM05D007285 ORTHO05D009224 9.2e-19 97.1 82 67.1
ATR0763G085 Amborella trichopoda HOM05D007285 ORTHO05D009224 2.1e-18 95.9 102 52.9
BolC5t31425H Brassica oleracea HOM05D007285 ORTHO05D009224 1.7e-17 92.8 115 47.8
BcaC01g00030 Brassica carinata HOM05D007285 ORTHO05D009224 2.3e-17 92.4 120 46.7
SalBow8G3155 Salvia bowleyana HOM05D007285 ORTHO05D009224 2.3e-17 92.4 70 75.7
SEGI_38595 Sequoiadendron giganteum HOM05D007285 ORTHO05D009224 6.6e-17 90.9 101 50.5
Zm00001eb305570 Zea mays HOM05D007285 ORTHO05D009224 6.6e-17 90.9 90 56.7
MELO3C002614.2 Cucumis melo HOM05D007285 ORTHO05D009224 1.5e-16 89.7 69 72.5
BcaB03g12118 Brassica carinata HOM05D007285 ORTHO05D009224 1.2e-13 80.1 71 57.7
Os07g0299600 Oryza sativa ssp. japonica HOM05D007285 ORTHO05D009224 4.2e-11 71.6 93 48.4
C03p74970 Brassica napus HOM05D007285 ORTHO05D009224 4.6e-10 68.2 120 37.5
Pp3c8_510 Physcomitrium patens HOM05D007285 ORTHO05D009224 4.6e-10 68.2 99 43.4
Mapoly0007s0165 Marchantia polymorpha HOM05D007285 ORTHO05D009224 1.9e-08 62.8 94 41.5
CDE12G0235 Ceratophyllum demersum HOM05D007285 ORTHO05D009224 1.3e-07 60.1 92 43.5


User provided reference genes

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