Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_007913 Daucus carota HOM05D009013 ORTHO05D009761 9.4e-152 540.4 327 100.0
DCAR_003953 Daucus carota HOM05D009013 ORTHO05D009761 3.1e-62 243.0 331 47.1
Dinv03635 Davidia involucrata HOM05D009013 ORTHO05D009761 1.7e-39 167.5 316 43.4
DCAR_027956 Daucus carota HOM05D014645 ORTHO05D009761 1.1e-22 111.7 422 33.2
Hma1.2p1_0015F.1_g010420 Hydrangea macrophylla HOM05D009013 ORTHO05D009761 2.4e-22 110.5 302 41.1
CSS0047309 Camellia sinensis var. sinensis HOM05D014645 ORTHO05D009761 3.2e-19 100.1 177 42.4
Actinidia07666 Actinidia chinensis HOM05D014645 ORTHO05D009761 1.2e-18 98.2 147 40.1
QL05p060720 Quercus lobata HOM05D009013 ORTHO05D009761 4.0e-17 93.2 317 30.6
CSS0045433 Camellia sinensis var. sinensis HOM05D014645 ORTHO05D009761 2.4e-14 84.0 418 29.2
FAN11G2258 Fragaria x ananassa HOM05D014736 ORTHO05D009761 4.1e-14 83.2 177 36.2
Actinidia27190 Actinidia chinensis HOM05D014645 ORTHO05D009761 1.2e-13 81.6 125 40.0
Oeu021526.1 Olea europaea HOM05D012266 ORTHO05D011876 1.2e-13 81.6 330 30.9
Actinidia39545 Actinidia chinensis HOM05D014645 ORTHO05D009761 1.6e-13 81.3 125 40.0
Phvul.009G214600 Phaseolus vulgaris HOM05D009013 ORTHO05D009761 1.0e-12 78.6 304 26.3
FvH4_3g06440 Fragaria vesca HOM05D014736 ORTHO05D009761 2.3e-12 77.4 193 35.8
FAN25G1841 Fragaria x ananassa HOM05D014736 ORTHO05D009761 2.9e-12 77.0 193 35.8
Lalb_Chr13g0295461 Lupinus albus HOM05D009013 ORTHO05D009761 5.0e-12 76.3 263 28.5
FAN21G2246 Fragaria x ananassa HOM05D014736 ORTHO05D009761 6.6e-12 75.9 145 37.9
TWI73G0525 Tripterygium wilfordii HOM05D009852 ORTHO05D009761 6.6e-12 75.9 313 29.1
CiPaw.09G129900 Carya illinoinensis HOM05D009013 ORTHO05D009761 8.6e-12 75.5 100 41.0
Lj6g0000102 Lotus japonicus HOM05D009013 ORTHO05D009761 1.1e-11 75.1 76 48.7
Oeu046855.1 Olea europaea HOM05D012266 ORTHO05D011876 2.5e-11 73.9 331 28.1
Cfa001036 Carpinus fangiana HOM05D009013 ORTHO05D009761 4.2e-11 73.2 313 31.9
Cc00_g03210 Coffea canephora HOM05D012094 ORTHO05D009761 7.2e-11 72.4 296 27.7
Glyma.13G051300 Glycine max HOM05D009013 ORTHO05D009761 9.5e-11 72.0 48 62.5
Lalb_Chr08g0233301 Lupinus albus HOM05D009013 ORTHO05D009761 9.5e-11 72.0 77 48.1
VMungo1309G2255 Vigna mungo HOM05D009013 ORTHO05D009761 9.5e-11 72.0 300 26.7
Lalb_Chr07g0186121 Lupinus albus HOM05D009013 ORTHO05D009761 1.2e-10 71.6 304 28.3
Ciclev10017480m.g Citrus clementina HOM05D009852 ORTHO05D009761 2.1e-10 70.9 310 31.0
Peaxi162Scf00121g01412 Petunia axillaris HOM05D012094 ORTHO05D011876 2.1e-10 70.9 176 30.7
Haze_05479 Corylus avellana HOM05D009013 ORTHO05D009761 4.7e-10 69.7 310 31.3
Glyma.05G164200 Glycine max HOM05D009013 ORTHO05D009761 4.7e-10 69.7 146 34.9
Nitab4.5_0000206g0120 Nicotiana tabacum HOM05D012094 ORTHO05D011876 8.0e-10 68.9 170 31.2
Glyma.15G195700 Glycine max HOM05D009013 ORTHO05D009761 1.8e-09 67.8 312 30.4
Glyma.08G121600 Glycine max HOM05D009013 ORTHO05D009761 2.3e-09 67.4 257 28.8
Glyma.09G085700 Glycine max HOM05D009013 ORTHO05D009761 4.0e-09 66.6 302 26.8
Nitab4.5_0003714g0090 Nicotiana tabacum HOM05D012094 ORTHO05D011876 4.0e-09 66.6 355 27.6
CiPaw.10G096600 Carya illinoinensis HOM05D009013 ORTHO05D009761 6.8e-09 65.9 305 27.5
MD05G1292200 Malus domestica HOM05D014736 ORTHO05D009761 6.8e-09 65.9 170 30.6
Nitab4.5_0001826g0030 Nicotiana tabacum HOM05D012094 ORTHO05D011876 6.8e-09 65.9 149 32.2
Psat1g020440 Pisum sativum HOM05D009013 ORTHO05D009761 8.9e-09 65.5 55 52.7
EL10Ac8g19799 Beta vulgaris HOM05D018558 ORTHO05D018254 1.2e-08 65.1 162 32.1
MD10G1268000 Malus domestica HOM05D014736 ORTHO05D009761 1.2e-08 65.1 177 30.5
CANSAT35G0309 Cannabis sativa HOM05D009013 ORTHO05D009761 1.5e-08 64.7 114 34.2
TWI09G1113 Tripterygium wilfordii HOM05D009852 ORTHO05D009761 1.5e-08 64.7 308 26.9
Atru.chr10.1414 Acer truncatum HOM05D009852 ORTHO05D009761 3.4e-08 63.5 265 30.2
arahy.Tifrunner.gnm1.ann1.KKL43J Arachis hypogaea HOM05D051477 ORTHO05D009761 3.4e-08 63.5 105 36.2
arahy.Tifrunner.gnm1.ann1.KTB3LS Arachis hypogaea HOM05D051477 ORTHO05D009761 3.4e-08 63.5 105 36.2
arahy.Tifrunner.gnm1.ann1.3YWF5K Arachis hypogaea HOM05D009013 ORTHO05D009761 4.4e-08 63.2 92 39.1
Lalb_Chr12g0204801 Lupinus albus HOM05D009013 ORTHO05D009761 4.4e-08 63.2 255 24.7
Prupe.4G073200 Prunus persica HOM05D014736 ORTHO05D009761 4.4e-08 63.2 278 32.0
TWI09G0214 Tripterygium wilfordii HOM05D009852 ORTHO05D009761 5.7e-08 62.8 308 26.6
COL.COLO4_22804 Corchorus olitorius HOM05D009852 ORTHO05D009761 7.5e-08 62.4 144 33.3
Lj4g0005206 Lotus japonicus HOM05D009013 ORTHO05D009761 7.5e-08 62.4 312 26.3
Manes.17G064400 Manihot esculenta HOM05D009852 ORTHO05D009761 7.5e-08 62.4 338 32.2
Actinidia19483 Actinidia chinensis HOM05D014645 ORTHO05D009761 9.8e-08 62.0 377 27.9
arahy.Tifrunner.gnm1.ann1.5V604V Arachis hypogaea HOM05D009013 ORTHO05D009761 1.3e-07 61.6 93 38.7
Psat1g018200 Pisum sativum HOM05D009013 ORTHO05D009761 1.3e-07 61.6 90 40.0
TPR.G31355 Trifolium pratense HOM05D009013 ORTHO05D009761 2.2e-07 60.8 109 36.7
PSO675G7770 Papaver somniferum HOM05D022831 ORTHO05D023597 2.9e-07 60.5 107 37.4
Gohir.D10G032500 Gossypium hirsutum HOM05D009852 ORTHO05D009761 3.7e-07 60.1 121 36.4
Gorai.011G034400 Gossypium raimondii HOM05D009852 ORTHO05D009761 3.7e-07 60.1 121 36.4
Lalb_Chr23g0275971 Lupinus albus HOM05D009013 ORTHO05D009761 3.7e-07 60.1 174 30.5
SGA_v2.0_scaffold333G49024 Striga asiatica HOM05D012266 ORTHO05D011876 3.7e-07 60.1 154 29.2
VMungo0251G0903 Vigna mungo HOM05D009013 ORTHO05D009761 3.7e-07 60.1 92 39.1
Aqoxy4G00149 Aquilegia oxysepala HOM05D022831 ORTHO05D023597 4.9e-07 59.7 288 27.4
Eucgr.D00345 Eucalyptus grandis HOM05D014736 ORTHO05D009761 4.9e-07 59.7 71 42.3
Sopen02g020380 Solanum pennellii HOM05D012094 ORTHO05D011876 6.4e-07 59.3 178 30.3
MSTRG.13241 Avicennia marina HOM05D012266 ORTHO05D011876 8.3e-07 58.9 257 30.7
ECA248G0823 Erigeron canadensis HOM05D038653 ORTHO05D020580 8.3e-07 58.9 51 52.9
Ca_25278_v3 Cicer arietinum L. HOM05D009013 ORTHO05D009761 1.8e-06 57.8 69 40.6
PSO541G1916 Papaver somniferum HOM05D022831 ORTHO05D023597 2.4e-06 57.4 107 36.4
Phvul.002G244200 Phaseolus vulgaris HOM05D009013 ORTHO05D009761 2.4e-06 57.4 92 39.1
SalBow7G2103 Salvia bowleyana HOM05D012266 ORTHO05D011876 7.0e-06 55.8 293 27.0
Aa31LG6G6070 Aethionema arabicum HOM05D008719 ORTHO05D010898 9.2e-06 55.5 66 43.9
Dinv32301 Davidia involucrata HOM05D009013 ORTHO05D009761 9.2e-06 55.5 290 27.9
ECA236G3144 Erigeron canadensis HOM05D025910 ORTHO05D020580 9.2e-06 55.5 110 37.3
TPR.G22001 Trifolium pratense HOM05D009013 ORTHO05D009761 9.2e-06 55.5 256 26.2


User provided reference genes

Program Settings