Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_007886 Daucus carota HOM05D001016 ORTHO05D028673 1.3e-61 239.6 125 100.0
DCAR_003906 Daucus carota HOM05D001016 ORTHO05D004071 2.2e-24 115.9 86 80.2
PGSC0003DMG400007488 Solanum tuberosum HOM05D001016 ORTHO05D004071 2.7e-14 82.4 86 57.0
Sopen08g007290 Solanum pennellii HOM05D001016 ORTHO05D004071 3.5e-14 82.0 86 55.8
CSS0003349 Camellia sinensis var. sinensis HOM05D001016 ORTHO05D004071 2.3e-13 79.3 86 53.5
Solyc08g016750.3 Solanum lycopersicum HOM05D001016 ORTHO05D004071 2.3e-13 79.3 86 54.7
Atru.chr10.1195 Acer truncatum HOM05D001016 ORTHO05D004071 3.0e-13 79.0 88 54.5
Solyc04g008590.3 Solanum lycopersicum HOM05D001016 ORTHO05D004071 3.9e-13 78.6 86 53.5
Ciclev10015440m.g Citrus clementina HOM05D001016 ORTHO05D004071 6.6e-13 77.8 86 54.7
Cfa000933 Carpinus fangiana HOM05D001016 ORTHO05D004071 1.1e-12 77.0 85 54.1
Peaxi162Scf00317g00114 Petunia axillaris HOM05D001016 ORTHO05D004071 1.5e-12 76.6 86 53.5
CAN.G880.3 Capsicum annuum HOM05D001016 ORTHO05D004071 1.9e-12 76.3 86 54.7
Haze_05616 Corylus avellana HOM05D001016 ORTHO05D004071 1.9e-12 76.3 85 54.1
Nitab4.5_0000348g0010 Nicotiana tabacum HOM05D001016 ORTHO05D004071 1.9e-12 76.3 87 52.9
CAN.G68.10 Capsicum annuum HOM05D001016 ORTHO05D004071 2.5e-12 75.9 86 52.3
TWI09G0448 Tripterygium wilfordii HOM05D001016 ORTHO05D004071 3.3e-12 75.5 88 52.3
Dinv30762 Davidia involucrata HOM05D001016 ORTHO05D028673 4.3e-12 75.1 86 55.8
CSS0036432 Camellia sinensis var. sinensis HOM05D001016 ORTHO05D004071 5.6e-12 74.7 85 54.1
Manes.17G071300 Manihot esculenta HOM05D001016 ORTHO05D004071 1.2e-11 73.6 88 51.1
Peaxi162Scf00394g00118 Petunia axillaris HOM05D001016 ORTHO05D004071 1.2e-11 73.6 85 50.6
Potri.017G076500 Populus trichocarpa HOM05D001016 ORTHO05D004071 1.2e-11 73.6 89 51.7
Gorai.009G154500 Gossypium raimondii HOM05D001016 ORTHO05D004071 2.8e-11 72.4 87 54.0
TWI53G0035 Tripterygium wilfordii HOM05D001016 ORTHO05D004071 2.8e-11 72.4 88 53.4
Sopen04g003750 Solanum pennellii HOM05D001016 ORTHO05D004071 8.1e-11 70.9 88 48.9
COL.COLO4_31054 Corchorus olitorius HOM05D001016 ORTHO05D004071 1.4e-10 70.1 90 53.3
PGR031G1194 Punica granatum HOM05D001016 ORTHO05D004071 1.4e-10 70.1 85 49.4
TAR626G0024 Trochodendron aralioides HOM05D001016 ORTHO05D004071 1.8e-10 69.7 86 47.7
vmacro03332 Vaccinium macrocarpon HOM05D001016 ORTHO05D004071 1.8e-10 69.7 86 51.2
Actinidia39581 Actinidia chinensis HOM05D001016 ORTHO05D004071 2.3e-10 69.3 79 51.9
Gohir.A05G147900 Gossypium hirsutum HOM05D001016 ORTHO05D004071 2.3e-10 69.3 87 52.9
Lsat_1_v5_gn_7_28120 Lactuca sativa HOM05D001016 ORTHO05D004071 2.3e-10 69.3 87 51.7
Thecc.06G148900 Theobroma cacao HOM05D001016 ORTHO05D004071 2.3e-10 69.3 90 53.3
Nitab4.5_0011303g0010 Nicotiana tabacum HOM05D001016 ORTHO05D004071 3.1e-10 68.9 100 48.0
CiPaw.09G122500 Carya illinoinensis HOM05D001016 ORTHO05D004071 5.2e-10 68.2 86 50.0
Manes.15G122600 Manihot esculenta HOM05D001016 ORTHO05D004071 5.2e-10 68.2 88 50.0
Actinidia07704 Actinidia chinensis HOM05D001016 ORTHO05D004071 6.8e-10 67.8 79 49.4
QL05p057475 Quercus lobata HOM05D001016 ORTHO05D004071 6.8e-10 67.8 78 51.3
GSVIVG01026353001 Vitis vinifera HOM05D001016 ORTHO05D004071 8.9e-10 67.4 86 50.0
Gohir.D06G143200 Gossypium hirsutum HOM05D001016 ORTHO05D004071 1.2e-09 67.0 90 52.2
Eucgr.E01909 Eucalyptus grandis HOM05D001016 ORTHO05D004071 1.5e-09 66.6 84 50.0
Gorai.010G167000 Gossypium raimondii HOM05D001016 ORTHO05D004071 1.5e-09 66.6 90 52.2
Lsat_1_v5_gn_4_29381 Lactuca sativa HOM05D001016 ORTHO05D004071 2.6e-09 65.9 86 52.3
Cpa.g.sc246.2 Carica papaya HOM05D001016 ORTHO05D004071 3.4e-09 65.5 86 48.8
Duzib235G1429 Durio zibethinus HOM05D001016 ORTHO05D004071 4.4e-09 65.1 90 51.1
Gohir.A06G138500 Gossypium hirsutum HOM05D001016 ORTHO05D004071 4.4e-09 65.1 90 52.2
Duzib192G0341 Durio zibethinus HOM05D001016 ORTHO05D004071 9.9e-09 63.9 88 50.0
HanXRQChr16g0525591 Helianthus annuus HOM05D001016 ORTHO05D004071 9.9e-09 63.9 87 50.6
Nn3g20468 Nelumbo nucifera HOM05D001016 ORTHO05D028673 1.3e-08 63.5 101 45.5
Nitab4.5_0003681g0010 Nicotiana tabacum HOM05D001016 ORTHO05D004071 2.2e-08 62.8 74 51.4
PGSC0003DMG400031370 Solanum tuberosum HOM05D001016 ORTHO05D004071 3.7e-08 62.0 73 50.7
HanXRQChr04g0114361 Helianthus annuus HOM05D001016 ORTHO05D004071 4.9e-08 61.6 87 51.7
Rhsim13G0114600 Rhododendron simsii HOM05D001016 ORTHO05D004071 6.4e-08 61.2 86 47.7
Ca_18175_v3 Cicer arietinum L. HOM05D001016 ORTHO05D004071 1.1e-07 60.5 87 44.8
Nn3g20469 Nelumbo nucifera HOM05D001016 ORTHO05D004071 1.1e-07 60.5 82 51.2
Aa31LG10G6800 Aethionema arabicum HOM05D001016 ORTHO05D004071 1.4e-07 60.1 86 41.9
Sabra04G0087800 Salix brachista HOM05D001016 ORTHO05D004071 1.4e-07 60.1 92 42.4
HanXRQChr17g0564651 Helianthus annuus HOM05D001016 ORTHO05D004071 2.4e-07 59.3 87 49.4
Gorai.010G238200 Gossypium raimondii HOM05D001016 ORTHO05D004071 3.2e-07 58.9 94 43.6
Sed0004585 Sechium edule HOM05D001016 ORTHO05D004071 3.2e-07 58.9 85 44.7
TPR.G9587 Trifolium pratense HOM05D001016 ORTHO05D004071 5.4e-07 58.2 87 43.7
CiPaw.10G090900 Carya illinoinensis HOM05D001016 ORTHO05D028673 7.1e-07 57.8 77 48.1
Rhsim13G0114500 Rhododendron simsii HOM05D001016 ORTHO05D004071 1.2e-06 57.0 86 48.8
CANSAT35G1281 Cannabis sativa HOM05D001016 ORTHO05D004071 1.6e-06 56.6 89 50.6
ClCG03G006760 Citrullus lanatus HOM05D001016 ORTHO05D004071 6.0e-06 54.7 86 41.9
MD05G1282600 Malus domestica HOM05D001016 ORTHO05D004071 6.0e-06 54.7 86 46.5
PSO541G5613 Papaver somniferum HOM05D001016 ORTHO05D004071 6.0e-06 54.7 89 42.7
Nitab4.5_0008296g0010 Nicotiana tabacum HOM05D001016 ORTHO05D004071 7.8e-06 54.3 53 54.7
THA.LOC104812671 Tarenaya hassleriana HOM05D001016 ORTHO05D004071 7.8e-06 54.3 86 43.0


User provided reference genes

Program Settings