Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_007806 Daucus carota HOM05D007947 ORTHO05D010018 1.7e-35 152.1 76 100.0
TWI73G0356 Tripterygium wilfordii HOM05D007947 ORTHO05D010018 3.5e-25 117.9 76 77.6
Manes.03G076700 Manihot esculenta HOM05D007947 ORTHO05D010018 1.2e-22 109.4 77 75.3
Cfa013564 Carpinus fangiana HOM05D007947 ORTHO05D010018 1.6e-22 109.0 67 79.1
Haze_22181 Corylus avellana HOM05D007947 ORTHO05D010018 2.1e-22 108.6 67 77.6
QL05p063460 Quercus lobata HOM05D007947 ORTHO05D010018 5.2e-21 104.0 67 74.6
CSS0033410 Camellia sinensis var. sinensis HOM05D007947 ORTHO05D010018 6.8e-21 103.6 76 73.7
TAR626G1269 Trochodendron aralioides HOM05D007947 ORTHO05D010018 8.9e-21 103.2 73 69.9
CiPaw.10G111600 Carya illinoinensis HOM05D007947 ORTHO05D010018 1.5e-20 102.4 76 72.4
MELO3C011733.2 Cucumis melo HOM05D007947 ORTHO05D010018 8.3e-19 96.7 61 77.0
CsaV3_5G006230 Cucumis sativus L. HOM05D007947 ORTHO05D010018 1.4e-18 95.9 61 77.0
Cc09_g06500 Coffea canephora HOM05D007947 ORTHO05D010018 1.9e-18 95.5 83 62.7
Hma1.2p1_0326F.1_g126180 Hydrangea macrophylla HOM05D007947 ORTHO05D010018 1.9e-18 95.5 76 65.8
CANSAT35G0466 Cannabis sativa HOM05D007947 ORTHO05D010018 2.4e-18 95.1 68 72.1
Cpa.g.sc53.149 Carica papaya HOM05D007947 ORTHO05D010018 5.4e-18 94.0 76 68.4
ClCG02G013940 Citrullus lanatus HOM05D007947 ORTHO05D010018 9.2e-18 93.2 63 77.8
PGR142G1313 Punica granatum HOM05D007947 ORTHO05D010018 1.2e-17 92.8 73 68.5
Nn7g37910 Nelumbo nucifera HOM05D007947 ORTHO05D010018 2.1e-17 92.0 76 63.2
COL.COLO4_30922 Corchorus olitorius HOM05D007947 ORTHO05D010018 3.5e-17 91.3 62 74.2
Ciclev10017351m.g Citrus clementina HOM05D007947 ORTHO05D010018 7.8e-17 90.1 50 84.0
Eucgr.D01574 Eucalyptus grandis HOM05D007947 ORTHO05D010018 1.0e-16 89.7 65 66.2
RcHm_v2.0_Chr5g0018941 Rosa chinensis HOM05D007947 ORTHO05D010018 2.3e-16 88.6 63 65.1
THA.LOC109116600 Tarenaya hassleriana HOM05D007947 ORTHO05D010018 3.0e-16 88.2 67 65.7
PGSC0003DMG400021235 Solanum tuberosum HOM05D007947 ORTHO05D010018 5.1e-16 87.4 54 74.1
Potri.003G148100 Populus trichocarpa HOM05D007947 ORTHO05D010018 8.6e-16 86.7 62 71.0
Gohir.D10G048700 Gossypium hirsutum HOM05D007947 ORTHO05D010018 1.1e-15 86.3 64 68.8
Eucgr.E02008 Eucalyptus grandis HOM05D007947 ORTHO05D010018 1.5e-15 85.9 50 78.0
Prupe.4G105200 Prunus persica HOM05D007947 ORTHO05D010018 1.5e-15 85.9 63 68.3
Sopen02g018620 Solanum pennellii HOM05D007947 ORTHO05D010018 1.5e-15 85.9 50 76.0
Gohir.A10G047400 Gossypium hirsutum HOM05D007947 ORTHO05D010018 1.9e-15 85.5 63 66.7
MD10G1239200 Malus domestica HOM05D007947 ORTHO05D010018 4.3e-15 84.3 76 60.5
Potri.001G082332 Populus trichocarpa HOM05D007947 ORTHO05D010018 4.3e-15 84.3 53 77.4
TPR.G15070 Trifolium pratense HOM05D007947 ORTHO05D010018 4.3e-15 84.3 67 62.7
Gorai.011G051800 Gossypium raimondii HOM05D007947 ORTHO05D010018 5.6e-15 84.0 64 67.2
FAN21G3705 Fragaria x ananassa HOM05D000217 ORTHO05D000121 1.2e-14 82.8 65 63.1
LjContig00081g0013704 Lotus japonicus HOM05D007947 ORTHO05D010018 1.2e-14 82.8 68 61.8
MD05G1260300 Malus domestica HOM05D007947 ORTHO05D010018 1.2e-14 82.8 63 66.7
Medtr5g098300 Medicago truncatula HOM05D007947 ORTHO05D010018 1.2e-14 82.8 69 62.3
Phvul.008G288200 Phaseolus vulgaris HOM05D007947 ORTHO05D010018 1.2e-14 82.8 67 59.7
Duzib192G0353 Durio zibethinus HOM05D007947 ORTHO05D010018 1.6e-14 82.4 64 64.1
Duzib235G0890 Durio zibethinus HOM05D007947 ORTHO05D010018 1.6e-14 82.4 65 66.2
Migut.M01948 Erythranthe guttata HOM05D007947 ORTHO05D010018 1.6e-14 82.4 54 74.1
Glyma.02G308300 Glycine max HOM05D007947 ORTHO05D010018 1.6e-14 82.4 65 61.5
Sabra03G0107800 Salix brachista HOM05D000054 ORTHO05D000171 2.1e-14 82.0 62 66.1
Ca_06479_v3 Cicer arietinum L. HOM05D007947 ORTHO05D010018 3.6e-14 81.3 63 66.7
AT1G31335 Arabidopsis thaliana HOM05D007947 ORTHO05D010018 4.7e-14 80.9 56 64.3
Carub.0001s2978 Capsella rubella HOM05D007947 ORTHO05D010018 4.7e-14 80.9 56 64.3
BcaB07g32795 Brassica carinata HOM05D007947 ORTHO05D010018 8.1e-14 80.1 62 61.3
FAN16G2050 Fragaria x ananassa HOM05D007947 ORTHO05D010018 8.1e-14 80.1 65 60.0
SalBow8G2047 Salvia bowleyana HOM05D007947 ORTHO05D010018 1.1e-13 79.7 67 64.2
BcaC05g27167 Brassica carinata HOM05D007947 ORTHO05D010018 1.4e-13 79.3 64 59.4
C07p14500 Brassica napus HOM05D007947 ORTHO05D010018 1.4e-13 79.3 59 62.7
BolC5t31792H Brassica oleracea HOM05D007947 ORTHO05D010018 1.4e-13 79.3 64 59.4
AL1G49700 Arabidopsis lyrata HOM05D007947 ORTHO05D010018 1.8e-13 79.0 64 60.9
BcaB03g13798 Brassica carinata HOM05D007947 ORTHO05D010018 1.8e-13 79.0 65 58.5
A09p34910 Brassica napus HOM05D007947 ORTHO05D010018 1.8e-13 79.0 64 59.4
C05p30570 Brassica napus HOM05D007947 ORTHO05D010018 1.8e-13 79.0 64 59.4
BolC7t41949H Brassica oleracea HOM05D007947 ORTHO05D010018 1.8e-13 79.0 65 58.5
BraA09t39021Z Brassica rapa HOM05D007947 ORTHO05D010018 1.8e-13 79.0 64 59.4
BraA07t28738Z Brassica rapa HOM05D007947 ORTHO05D010018 2.4e-13 78.6 62 59.7
Oeu030705.1 Olea europaea HOM05D007947 ORTHO05D010018 2.4e-13 78.6 67 59.7
Sp1g27170 Schrenkiella parvula HOM05D007947 ORTHO05D010018 2.4e-13 78.6 64 57.8
VMungo0647G0519 Vigna mungo HOM05D000879 ORTHO05D002864 4.0e-13 77.8 49 69.4
Psat2g003200 Pisum sativum HOM05D007947 ORTHO05D010018 5.2e-13 77.4 61 62.3
Thhalv10009264m.g Eutrema salsugineum HOM05D007947 ORTHO05D010018 6.8e-13 77.0 64 57.8
CARHR030800 Cardamine hirsuta HOM05D007947 ORTHO05D010018 1.2e-12 76.3 76 53.9
Glyma.14G004800 Glycine max HOM05D007947 ORTHO05D010018 1.5e-12 75.9 63 60.3
Gohir.D09G076300 Gossypium hirsutum HOM05D007947 ORTHO05D010018 3.4e-12 74.7 61 62.3
Gorai.006G091500 Gossypium raimondii HOM05D007947 ORTHO05D010018 3.4e-12 74.7 61 62.3
Ciclev10017780m.g Citrus clementina HOM05D007947 ORTHO05D010018 4.4e-12 74.3 40 80.0
Nn7g37911 Nelumbo nucifera HOM05D007947 ORTHO05D010018 4.4e-12 74.3 67 52.2
arahy.Tifrunner.gnm1.ann1.F2U9KI Arachis hypogaea HOM05D001153 ORTHO05D000949 9.9e-12 73.2 46 71.7
HanXRQChr16g0528851 Helianthus annuus HOM05D007947 ORTHO05D010018 1.3e-11 72.8 76 53.9
Lalb_Chr04g0247121 Lupinus albus HOM05D007947 ORTHO05D010018 1.7e-11 72.4 49 69.4
Gohir.A09G076300 Gossypium hirsutum HOM05D007947 ORTHO05D010018 2.2e-11 72.0 61 60.7
Sc09g0004070 Simmondsia chinensis HOM05D007947 ORTHO05D010018 2.2e-11 72.0 49 73.5
Os03g0780200 Oryza sativa ssp. japonica HOM05D007947 ORTHO05D010018 3.8e-11 71.2 78 52.6
Zm00001eb057320 Zea mays HOM05D007947 ORTHO05D010018 1.4e-10 69.3 69 52.2
Zm00001eb213660 Zea mays HOM05D007947 ORTHO05D010018 4.6e-09 64.3 71 50.7
Zm00001eb059730 Zea mays HOM05D007947 ORTHO05D010018 1.3e-08 62.8 69 47.8
Nn7g37890 Nelumbo nucifera HOM05D021221 ORTHO05D025179 2.5e-07 58.5 92 40.2
Glyma.19G182200 Glycine max HOM05D009309 ORTHO05D011491 2.1e-06 55.5 48 62.5
Medtr5g098270 Medicago truncatula HOM05D007947 ORTHO05D010018 2.8e-06 55.1 54 50.0
Phvul.001G177600 Phaseolus vulgaris HOM05D009309 ORTHO05D011491 2.8e-06 55.1 47 63.8
Glyma.03G181500 Glycine max HOM05D009309 ORTHO05D011491 3.6e-06 54.7 48 62.5
Sabra18G0012600 Salix brachista HOM05D003482 ORTHO05D010018 8.1e-06 53.5 40 67.5


User provided reference genes

Program Settings