Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_007797 Daucus carota HOM05D003643 ORTHO05D005001 5.5e-281 970.3 489 100.0
Dinv35809 Davidia involucrata HOM05D003643 ORTHO05D005001 1.3e-208 729.9 491 75.6
Lj1C1143T1 Lonicera japonica HOM05D003643 ORTHO05D005001 8.1e-208 727.2 503 74.8
Atru.chr1.1970 Acer truncatum HOM05D003643 ORTHO05D005001 1.5e-206 723.0 480 75.4
Actinidia22386 Actinidia chinensis HOM05D003643 ORTHO05D005001 8.4e-205 717.2 488 74.8
Cfa023544 Carpinus fangiana HOM05D003643 ORTHO05D005001 9.3e-204 713.8 496 73.0
CANSAT21G2447 Cannabis sativa HOM05D003643 ORTHO05D005001 1.3e-202 709.9 480 73.5
Thecc.04G162500 Theobroma cacao HOM05D003643 ORTHO05D005001 8.7e-202 707.2 491 73.3
Cc09_g06330 Coffea canephora HOM05D003643 ORTHO05D005001 1.5e-201 706.4 487 71.5
Lalb_Chr16g0385301 Lupinus albus HOM05D003643 ORTHO05D005001 5.6e-201 704.5 501 70.7
Ca_18772_v3 Cicer arietinum L. HOM05D003643 ORTHO05D005001 1.3e-200 703.4 504 71.2
Glyma.07G222900 Glycine max HOM05D003643 ORTHO05D005001 2.8e-200 702.2 479 73.5
Phvul.L009001 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 1.1e-199 700.3 483 73.9
Psat0s5231g0040 Pisum sativum HOM05D003643 ORTHO05D005001 1.1e-199 700.3 492 72.6
Eucgr.D01040 Eucalyptus grandis HOM05D003643 ORTHO05D005001 1.4e-199 699.9 484 72.9
Cpa.g.sc178.8 Carica papaya HOM05D003643 ORTHO05D005001 1.8e-199 699.5 480 72.5
Phvul.L001601 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 3.1e-199 698.7 483 73.7
CiPaw.03G114100 Carya illinoinensis HOM05D003643 ORTHO05D005001 5.3e-199 698.0 480 72.5
Glyma.20G021900 Glycine max HOM05D003643 ORTHO05D005001 6.9e-199 697.6 481 73.6
Phvul.003G000252 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 9.0e-199 697.2 483 73.7
Nitab4.5_0002056g0030 Nicotiana tabacum HOM05D003643 ORTHO05D005001 1.5e-198 696.4 494 71.9
Gohir.D10G121400 Gossypium hirsutum HOM05D003643 ORTHO05D005001 5.8e-198 694.5 490 71.8
Gorai.011G133500 Gossypium raimondii HOM05D003643 ORTHO05D005001 5.8e-198 694.5 490 71.8
Potri.004G075600 Populus trichocarpa HOM05D003643 ORTHO05D005001 7.6e-198 694.1 484 72.5
CsaV3_1G046560 Cucumis sativus L. HOM05D003643 ORTHO05D005001 9.9e-198 693.7 488 71.7
Lj1g0023184 Lotus japonicus HOM05D003643 ORTHO05D005001 9.9e-198 693.7 481 73.2
Lj1g0022937 Lotus japonicus HOM05D003643 ORTHO05D005001 1.3e-197 693.3 481 73.2
RcHm_v2.0_Chr5g0019781 Rosa chinensis HOM05D003643 ORTHO05D005001 2.9e-197 692.2 507 71.0
TWI77G0757 Tripterygium wilfordii HOM05D003643 ORTHO05D005001 6.4e-197 691.0 490 72.7
CSS0044821 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D005001 8.4e-197 690.6 495 70.7
GSVIVG01012096001 Vitis vinifera HOM05D003643 ORTHO05D005001 1.1e-196 690.3 490 72.0
BcaB01g04707 Brassica carinata HOM05D003643 ORTHO05D005001 1.4e-196 689.9 487 70.6
AT5G22480 Arabidopsis thaliana HOM05D003643 ORTHO05D005001 4.2e-196 688.3 495 69.9
BcaB04g18097 Brassica carinata HOM05D003643 ORTHO05D005001 4.2e-196 688.3 480 72.1
HanXRQChr07g0189641 Helianthus annuus HOM05D003643 ORTHO05D005001 5.4e-196 688.0 482 72.4
Psat6g043080 Pisum sativum HOM05D003643 ORTHO05D005001 5.4e-196 688.0 489 71.8
Migut.M01969 Erythranthe guttata HOM05D003643 ORTHO05D005001 7.1e-196 687.6 486 72.2
HanXRQChr14g0433091 Helianthus annuus HOM05D003643 ORTHO05D005001 7.1e-196 687.6 480 72.3
PGR083G1065 Punica granatum HOM05D003643 ORTHO05D005001 1.6e-195 686.4 489 70.3
BcaC07g37705 Brassica carinata HOM05D003643 ORTHO05D005001 3.5e-195 685.3 498 69.7
Medtr4g083780 Medicago truncatula HOM05D003643 ORTHO05D005001 3.5e-195 685.3 480 72.9
Sed0017297 Sechium edule HOM05D003643 ORTHO05D005001 3.5e-195 685.3 479 72.0
PGSC0003DMG400010363 Solanum tuberosum HOM05D003643 ORTHO05D005001 3.5e-195 685.3 485 70.9
AL6G33500 Arabidopsis lyrata HOM05D003643 ORTHO05D005001 4.6e-195 684.9 487 70.4
Duzib268G1178 Durio zibethinus HOM05D003643 ORTHO05D005001 4.6e-195 684.9 492 70.1
VMungo0251G0454 Vigna mungo HOM05D003643 ORTHO05D005001 4.6e-195 684.9 490 70.8
FvH4_3g12070 Fragaria vesca HOM05D003643 ORTHO05D005001 6.0e-195 684.5 502 70.1
vmacro11251 Vaccinium macrocarpon HOM05D003643 ORTHO05D005001 6.0e-195 684.5 511 68.5
CARHR215770 Cardamine hirsuta HOM05D003643 ORTHO05D005001 7.9e-195 684.1 479 71.4
THA.LOC104822105 Tarenaya hassleriana HOM05D003643 ORTHO05D005001 7.9e-195 684.1 490 69.8
TPR.G20995 Trifolium pratense HOM05D003643 ORTHO05D005001 1.8e-194 682.9 494 70.9
TAR365G0076 Trochodendron aralioides HOM05D003643 ORTHO05D005001 2.3e-194 682.6 485 70.1
Carub.0006s2022 Capsella rubella HOM05D003643 ORTHO05D005001 3.0e-194 682.2 479 71.0
AL7G45920 Arabidopsis lyrata HOM05D003643 ORTHO05D005001 3.9e-194 681.8 482 70.7
A10p18340 Brassica napus HOM05D003643 ORTHO05D005001 3.9e-194 681.8 487 69.8
SGA_v2.0_scaffold298G47674 Striga asiatica HOM05D003643 ORTHO05D005001 3.9e-194 681.8 506 69.4
CAN.G1222.6 Capsicum annuum HOM05D003643 ORTHO05D005001 5.1e-194 681.4 497 69.8
MD05G1254800 Malus domestica HOM05D003643 ORTHO05D005001 5.1e-194 681.4 480 71.5
Oeu060347.1 Olea europaea HOM05D003643 ORTHO05D005001 5.1e-194 681.4 485 70.5
A08p10150 Brassica napus HOM05D003643 ORTHO05D005001 6.7e-194 681.0 498 69.1
BraA08t33014Z Brassica rapa HOM05D003643 ORTHO05D005001 6.7e-194 681.0 502 68.9
BraA10t43914Z Brassica rapa HOM05D003643 ORTHO05D005001 6.7e-194 681.0 479 71.0
BcaC04g19578 Brassica carinata HOM05D003643 ORTHO05D005001 8.7e-194 680.6 491 69.5
FAN21G1938 Fragaria x ananassa HOM05D003643 ORTHO05D005001 8.7e-194 680.6 499 69.9
AT5G37340 Arabidopsis thaliana HOM05D003643 ORTHO05D005001 1.1e-193 680.2 479 71.4
C09p54110 Brassica napus HOM05D003643 ORTHO05D005001 1.1e-193 680.2 491 69.5
BolC9t58281H Brassica oleracea HOM05D003643 ORTHO05D005001 1.1e-193 680.2 491 69.5
FAN25G0143 Fragaria x ananassa HOM05D003643 ORTHO05D005001 1.1e-193 680.2 502 69.7
BcaC01g06578 Brassica carinata HOM05D003643 ORTHO05D005001 1.5e-193 679.9 488 69.3
Thhalv10013358m.g Eutrema salsugineum HOM05D003643 ORTHO05D005001 1.5e-193 679.9 487 69.2
Solyc02g069120.3 Solanum lycopersicum HOM05D003643 ORTHO05D005001 1.5e-193 679.9 485 70.3
Sopen02g018250 Solanum pennellii HOM05D003643 ORTHO05D005001 1.5e-193 679.9 485 70.3
Prupe.4G109100 Prunus persica HOM05D003643 ORTHO05D005001 1.9e-193 679.5 493 70.2
CARHR191050 Cardamine hirsuta HOM05D003643 ORTHO05D005001 5.6e-193 677.9 480 70.6
MD10G1234900 Malus domestica HOM05D003643 ORTHO05D005001 5.6e-193 677.9 480 71.0
MELO3C021772.2 Cucumis melo HOM05D003643 ORTHO05D005001 7.4e-193 677.6 488 70.5
Thhalv10027733m.g Eutrema salsugineum HOM05D003643 ORTHO05D005001 1.3e-192 676.8 481 70.7
SalBow8G4557 Salvia bowleyana HOM05D003643 ORTHO05D005001 1.6e-192 676.4 485 71.5
SalBow8G5428 Salvia bowleyana HOM05D003643 ORTHO05D005001 1.6e-192 676.4 485 71.5
Lsat_1_v5_gn_5_36401 Lactuca sativa HOM05D003643 ORTHO05D005001 2.8e-192 675.6 479 70.8
A03p10790 Brassica napus HOM05D003643 ORTHO05D005001 3.7e-192 675.2 487 69.0
ECA238G3555 Erigeron canadensis HOM05D003643 ORTHO05D005001 1.8e-191 672.9 480 71.0
SpUn0005_0160 Schrenkiella parvula HOM05D003643 ORTHO05D005001 5.3e-191 671.4 490 69.2
BraA03t10388Z Brassica rapa HOM05D003643 ORTHO05D005001 1.2e-190 670.2 498 67.7
BcaB08g36427 Brassica carinata HOM05D003643 ORTHO05D005001 2.0e-190 669.5 502 68.3
Sabra04G0050300 Salix brachista HOM05D003643 ORTHO05D005001 2.6e-190 669.1 482 71.4
Rhsim04G0157300 Rhododendron simsii HOM05D003643 ORTHO05D005001 4.5e-190 668.3 517 67.9
BolC3t13712H Brassica oleracea HOM05D003643 ORTHO05D005001 2.9e-189 665.6 491 68.2
arahy.Tifrunner.gnm1.ann1.PVMC8E Arachis hypogaea HOM05D003643 ORTHO05D005001 4.9e-189 664.8 490 69.6
Sp6g22770 Schrenkiella parvula HOM05D003643 ORTHO05D005001 2.5e-188 662.5 482 70.5
FAN16G1159 Fragaria x ananassa HOM05D003643 ORTHO05D005001 3.2e-188 662.1 502 68.7
COL.COLO4_08070 Corchorus olitorius HOM05D003643 ORTHO05D005001 9.3e-188 660.6 534 64.4
Sc22g0000430 Simmondsia chinensis HOM05D003643 ORTHO05D005001 1.0e-186 657.1 480 69.4
AUR62010551 Chenopodium quinoa HOM05D003643 ORTHO05D005001 1.5e-185 653.3 480 68.5
ECA246G0187 Erigeron canadensis HOM05D003643 ORTHO05D005001 3.3e-185 652.1 487 69.8
Lj1g0023481 Lotus japonicus HOM05D003643 ORTHO05D005001 9.6e-185 650.6 475 69.7
SGA_v2.0_scaffold95G28766 Striga asiatica HOM05D003643 ORTHO05D005001 3.1e-183 645.6 509 65.4
Nn7g37591 Nelumbo nucifera HOM05D003643 ORTHO05D005001 1.0e-181 640.6 482 66.4
unitig_32.g11672 Utricularia gibba HOM05D003643 ORTHO05D005001 1.0e-181 640.6 492 66.9
Hund14697 Selenicereus undatus HOM05D003643 ORTHO05D005001 1.0e-178 630.6 493 66.5
Oeu052674.3 Olea europaea HOM05D003643 ORTHO05D005001 5.7e-177 624.8 453 69.8
arahy.Tifrunner.gnm1.ann1.EU78CH Arachis hypogaea HOM05D003643 ORTHO05D005001 1.3e-176 623.6 490 66.7
PSO675G9021 Papaver somniferum HOM05D003643 ORTHO05D005001 1.3e-176 623.6 495 62.4
CDE02G0779 Ceratophyllum demersum HOM05D003643 ORTHO05D005001 1.1e-175 620.5 481 65.5
Zm00001eb058120 Zea mays HOM05D003643 ORTHO05D005001 3.4e-174 615.5 484 63.8
Manes.01G122000 Manihot esculenta HOM05D003643 ORTHO05D005001 4.5e-174 615.1 474 67.7
HPP92_015903 Vanilla planifolia HOM05D003643 ORTHO05D005001 7.7e-174 614.4 494 63.4
ATR0743G136 Amborella trichopoda HOM05D003643 ORTHO05D005001 8.5e-173 610.9 496 63.1
Os08g0471900 Oryza sativa ssp. japonica HOM05D003643 ORTHO05D005001 8.5e-173 610.9 465 65.6
AUR62017342 Chenopodium quinoa HOM05D003643 ORTHO05D005001 3.6e-171 605.5 574 56.4
EL10Ac5g12673 Beta vulgaris HOM05D003643 ORTHO05D005001 1.4e-170 603.6 568 59.3
Hund01937 Selenicereus undatus HOM05D003643 ORTHO05D005001 1.4e-170 603.6 489 64.4
Aa31LG9G17620 Aethionema arabicum HOM05D003643 ORTHO05D005001 2.3e-170 602.8 517 61.7
Mapoly0085s0072 Marchantia polymorpha HOM05D003643 ORTHO05D005001 2.3e-170 602.8 499 60.3
MBI07_g18519_MAGBIO Magnolia biondii HOM05D003643 ORTHO05D005001 2.5e-169 599.4 490 63.5
Lsat_1_v5_gn_2_29841 Lactuca sativa HOM05D003643 ORTHO05D005001 3.3e-169 599.0 497 64.2
Nitab4.5_0002463g0030 Nicotiana tabacum HOM05D003643 ORTHO05D005001 4.8e-168 595.1 494 65.0
Peaxi162Scf00128g01142 Petunia axillaris HOM05D003643 ORTHO05D005001 5.3e-167 591.7 485 65.4
Pp3c15_5070 Physcomitrium patens HOM05D003643 ORTHO05D005001 5.3e-167 591.7 504 58.9
TPR.G20778 Trifolium pratense HOM05D003643 ORTHO05D005001 9.1e-167 590.9 486 63.2
TPR.G9485 Trifolium pratense HOM05D003643 ORTHO05D005001 8.5e-165 584.3 481 63.2
Aqoxy5G01635 Aquilegia oxysepala HOM05D003643 ORTHO05D005001 2.5e-164 582.8 484 61.0
CSS0005005 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D005001 3.6e-163 578.9 385 74.5
Ca_20206_v3 Cicer arietinum L. HOM05D003643 ORTHO05D005001 9.1e-159 564.3 493 59.4
Nitab4.5_0004569g0010 Nicotiana tabacum HOM05D003643 ORTHO05D005001 2.2e-157 559.7 501 61.3
Ciclev10003667m.g Citrus clementina HOM05D003643 ORTHO05D005001 3.6e-155 552.4 378 75.1
CBR_g6566 Chara braunii HOM05D003643 ORTHO05D005001 3.7e-152 542.3 502 56.2
SMO203G0021 Selaginella moellendorffii HOM05D003643 ORTHO05D005001 1.2e-147 527.3 457 57.1
CBR_g34896 Chara braunii HOM05D003643 ORTHO05D005001 2.1e-147 526.6 493 56.0
ClCG01G009340 Citrullus lanatus HOM05D003643 ORTHO05D005001 1.0e-146 524.2 359 73.3
PSO017G1140 Papaver somniferum HOM05D003643 ORTHO05D005001 3.7e-144 515.8 383 67.4
QL07p008150 Quercus lobata HOM05D003643 ORTHO05D005001 1.8e-143 513.5 536 53.2
Phvul.002G099300 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 1.8e-138 496.9 390 67.2
Gohir.1Z049309 Gossypium hirsutum HOM05D003643 ORTHO05D005001 7.5e-137 491.5 362 69.6
Ah.12g057940 Amaranthus hybridus HOM05D003643 ORTHO05D005001 1.1e-135 487.6 388 65.7
Phvul.003G000226 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 3.6e-131 472.6 338 71.3
BolC8t48076H Brassica oleracea HOM05D003643 ORTHO05D005001 2.7e-126 456.4 369 65.9
CBR_g6568 Chara braunii HOM05D003643 ORTHO05D005001 3.3e-124 449.5 467 51.6
Peaxi162Scf00149g01022 Petunia axillaris HOM05D003643 ORTHO05D005001 1.2e-123 447.6 354 66.4
Phvul.L001739 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 1.6e-118 430.6 404 59.9
Haze_13620 Corylus avellana HOM05D003643 ORTHO05D005001 9.5e-116 421.4 275 76.7
Gohir.1Z049318 Gossypium hirsutum HOM05D003643 ORTHO05D005001 2.8e-115 419.9 299 70.9
Phvul.003G000304 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 1.4e-114 417.5 280 74.6
C03p12370 Brassica napus HOM05D003643 ORTHO05D005001 1.2e-105 387.9 368 57.1
Phvul.003G000330 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 8.6e-101 371.7 272 70.2
DCAR_017792 Daucus carota HOM05D003643 ORTHO05D005001 2.9e-96 356.7 217 85.7
Actinidia36045 Actinidia chinensis HOM05D003643 ORTHO05D005001 5.8e-89 332.4 231 71.4
Atru.chr3.103 Acer truncatum HOM05D003643 ORTHO05D005001 6.4e-80 302.4 252 66.7
Cfa025656 Carpinus fangiana HOM05D003643 ORTHO05D005001 1.9e-76 290.8 465 37.6
Phvul.L008901 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 8.1e-75 285.4 178 79.8
Phvul.003G000278 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 5.9e-65 252.7 182 69.8
SEGI_34727 Sequoiadendron giganteum HOM05D003643 ORTHO05D005001 5.0e-64 249.6 200 62.5
BolC8t48075H Brassica oleracea HOM05D003643 ORTHO05D018815 2.1e-54 217.6 138 73.2
Lsat_1_v5_gn_5_36361 Lactuca sativa HOM05D003643 ORTHO05D018815 5.1e-53 213.0 132 77.3
Atru.chr8.2696 Acer truncatum HOM05D003643 ORTHO05D005001 1.5e-49 201.4 298 45.3
Atru.chr8.2585 Acer truncatum HOM05D003643 ORTHO05D005001 5.9e-49 199.5 153 68.6
Peaxi162Scf00149g01017 Petunia axillaris HOM05D003643 ORTHO05D018815 7.2e-47 192.6 133 71.4
Psat3g171960 Pisum sativum HOM05D003643 ORTHO05D005001 1.8e-42 177.9 231 48.1
CSS0009011 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D005001 1.2e-41 175.3 114 75.4
Psat6g162200 Pisum sativum HOM05D003643 ORTHO05D005001 1.7e-40 171.4 258 43.4
ATR0712G001 Amborella trichopoda HOM05D003643 ORTHO05D023464 1.5e-39 168.3 123 65.0
ClCG01G009350 Citrullus lanatus HOM05D003643 ORTHO05D005001 4.0e-37 160.2 121 64.5
CSS0015856 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D005001 1.3e-35 155.2 114 68.4
Phvul.L001639 Phaseolus vulgaris HOM05D003643 ORTHO05D034905 2.2e-32 144.4 96 69.8
Phvul.L008801 Phaseolus vulgaris HOM05D003643 ORTHO05D034905 2.2e-32 144.4 96 69.8
CBR_g12037 Chara braunii HOM05D003643 ORTHO05D005001 5.2e-29 133.3 188 42.0
Haze_13621 Corylus avellana HOM05D003643 ORTHO05D018815 1.3e-24 118.6 69 81.2
ClCG01G009330 Citrullus lanatus HOM05D003643 ORTHO05D018815 3.8e-24 117.1 64 84.4
Gohir.A10G145401 Gossypium hirsutum HOM05D003643 ORTHO05D018815 2.1e-22 111.3 59 86.4
CSS0023685 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D018815 2.6e-20 104.4 73 67.1
CSS0030804 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D023464 3.4e-20 104.0 65 75.4
CSS0024414 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D023464 2.8e-19 100.9 65 72.3
CSS0049868 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D023464 8.3e-19 99.4 65 70.8
Lsat_1_v5_gn_5_135000 Lactuca sativa HOM05D003643 ORTHO05D005001 1.1e-18 99.0 79 63.3
CSS0012788 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D023464 1.7e-16 91.7 77 61.0
Cc11_g00920 Coffea canephora HOM05D003643 ORTHO05D005001 7.3e-15 86.3 67 64.2
Haze_13619 Corylus avellana HOM05D003643 ORTHO05D034905 1.2e-14 85.5 109 49.5
Lsat_1_v5_gn_5_54460 Lactuca sativa HOM05D003643 ORTHO05D005001 6.1e-14 83.2 180 36.1
Psat0s3903g0040 Pisum sativum HOM05D003643 ORTHO05D005001 8.9e-13 79.3 59 67.8
CSS0032340 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D018815 2.6e-12 77.8 48 66.7
HanXRQChr06g0180401 Helianthus annuus HOM05D003643 ORTHO05D005001 3.2e-10 70.9 38 81.6


User provided reference genes

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