Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_007782 Daucus carota HOM05D006242 ORTHO05D007936 3.0e-168 595.1 302 100.0
Dinv10532 Davidia involucrata HOM05D006242 ORTHO05D007936 1.3e-131 473.4 296 77.7
Rhsim06G0063600 Rhododendron simsii HOM05D006242 ORTHO05D007936 6.3e-126 454.5 293 75.4
Atru.chr10.429 Acer truncatum HOM05D006242 ORTHO05D007936 6.9e-125 451.1 296 74.0
Prupe.4G115300 Prunus persica HOM05D006242 ORTHO05D007936 1.3e-123 446.8 292 74.3
Cfa000677 Carpinus fangiana HOM05D006242 ORTHO05D007936 1.9e-122 443.0 290 74.1
Haze_06141 Corylus avellana HOM05D006242 ORTHO05D007936 1.9e-122 443.0 290 74.8
GSVIVG01012122001 Vitis vinifera HOM05D006242 ORTHO05D007936 1.9e-122 443.0 295 73.6
Actinidia22421 Actinidia chinensis HOM05D006242 ORTHO05D007936 3.2e-122 442.2 293 74.4
Manes.03G074100 Manihot esculenta HOM05D006242 ORTHO05D007936 7.2e-122 441.0 293 73.7
CAN.G79.44 Capsicum annuum HOM05D006242 ORTHO05D007936 2.1e-121 439.5 295 72.2
Hma1.2p1_1499F.1_g287250 Hydrangea macrophylla HOM05D006242 ORTHO05D007936 1.1e-119 433.7 294 72.1
QL11p013482 Quercus lobata HOM05D006242 ORTHO05D007936 3.3e-119 432.2 290 73.4
TWI38G1455 Tripterygium wilfordii HOM05D006242 ORTHO05D007936 2.8e-118 429.1 299 70.6
Nitab4.5_0008021g0020 Nicotiana tabacum HOM05D006242 ORTHO05D007936 3.7e-118 428.7 310 68.7
Thecc.02G006000 Theobroma cacao HOM05D006242 ORTHO05D007936 4.8e-118 428.3 295 71.5
Duzib248G1438 Durio zibethinus HOM05D006242 ORTHO05D007936 6.3e-118 427.9 301 71.1
PGSC0003DMG400014939 Solanum tuberosum HOM05D006242 ORTHO05D007936 1.1e-117 427.2 293 70.6
Solyc02g031980.3 Solanum lycopersicum HOM05D006242 ORTHO05D007936 4.1e-117 425.2 293 71.0
Gohir.D12G047300 Gossypium hirsutum HOM05D006242 ORTHO05D007936 5.3e-117 424.9 294 70.7
Potri.001G159600 Populus trichocarpa HOM05D006242 ORTHO05D007936 5.3e-117 424.9 292 70.9
MD10G1229500 Malus domestica HOM05D006242 ORTHO05D007936 1.2e-116 423.7 292 70.2
Gorai.008G050000 Gossypium raimondii HOM05D006242 ORTHO05D007936 1.5e-116 423.3 294 70.4
Gohir.A12G048500 Gossypium hirsutum HOM05D006242 ORTHO05D007936 3.4e-116 422.2 294 70.1
Cpa.g.sc30.139 Carica papaya HOM05D006242 ORTHO05D007936 7.7e-116 421.0 294 69.7
PSO541G0450 Papaver somniferum HOM05D006242 ORTHO05D007936 7.7e-116 421.0 295 69.5
RcHm_v2.0_Chr5g0020621 Rosa chinensis HOM05D006242 ORTHO05D007936 2.2e-115 419.5 292 70.2
Oeu058943.1 Olea europaea HOM05D006242 ORTHO05D007936 5.0e-115 418.3 309 66.0
Sabra01G0132400 Salix brachista HOM05D006242 ORTHO05D007936 5.0e-115 418.3 300 69.3
PSO675G0930 Papaver somniferum HOM05D006242 ORTHO05D007936 8.5e-115 417.5 295 68.8
FvH4_3g12650 Fragaria vesca HOM05D006242 ORTHO05D007936 3.2e-114 415.6 292 70.2
FAN25G2599 Fragaria x ananassa HOM05D006242 ORTHO05D007936 2.7e-113 412.5 292 69.9
Thhalv10017018m.g Eutrema salsugineum HOM05D006242 ORTHO05D007936 3.6e-113 412.1 295 69.8
Cc00_g22870 Coffea canephora HOM05D006242 ORTHO05D007936 4.7e-113 411.8 293 69.3
FAN21G1956 Fragaria x ananassa HOM05D006242 ORTHO05D007936 7.9e-113 411.0 292 69.2
A05p10660 Brassica napus HOM05D003281 ORTHO05D004128 3.0e-112 409.1 296 67.2
Carub.0004s1673 Capsella rubella HOM05D006242 ORTHO05D007936 1.5e-111 406.8 295 67.5
MBI02_g26996_MAGBIO Magnolia biondii HOM05D006242 ORTHO05D007936 1.5e-111 406.8 291 67.7
CANSAT35G0032 Cannabis sativa HOM05D006242 ORTHO05D007936 2.6e-111 406.0 295 68.5
ECA232G2813 Erigeron canadensis HOM05D006242 ORTHO05D007936 2.6e-111 406.0 290 71.4
Eucgr.B01565 Eucalyptus grandis HOM05D006242 ORTHO05D007936 2.6e-111 406.0 294 67.0
C04p13760 Brassica napus HOM05D003281 ORTHO05D004128 4.4e-111 405.2 296 67.2
BolC4t22966H Brassica oleracea HOM05D003281 ORTHO05D004128 4.4e-111 405.2 296 67.2
Lj1A1147G28 Lonicera japonica HOM05D006242 ORTHO05D007936 5.7e-111 404.8 270 75.2
SGA_v2.0_scaffold51G18672 Striga asiatica HOM05D006242 ORTHO05D007936 1.7e-110 403.3 294 67.3
AL4G31060 Arabidopsis lyrata HOM05D006242 ORTHO05D007936 4.8e-110 401.7 312 65.7
MSTRG.20044 Avicennia marina HOM05D006242 ORTHO05D007936 6.3e-110 401.4 293 68.3
HanXRQChr12g0381511 Helianthus annuus HOM05D006242 ORTHO05D007936 8.2e-110 401.0 293 69.3
PGR004G2427 Punica granatum HOM05D006242 ORTHO05D007936 9.1e-109 397.5 295 67.1
Cc09_g05740 Coffea canephora HOM05D006242 ORTHO05D007936 1.5e-108 396.7 297 68.4
Aa31LG9G16170 Aethionema arabicum HOM05D003281 ORTHO05D004128 5.9e-108 394.8 298 67.4
Lj6g0025800 Lotus japonicus HOM05D006242 ORTHO05D007936 5.0e-107 391.7 297 62.6
FAN16G0457 Fragaria x ananassa HOM05D006242 ORTHO05D007936 2.5e-106 389.4 319 63.3
Ciclev10016161m.g Citrus clementina HOM05D006242 ORTHO05D007936 2.3e-104 382.9 300 65.3
Lalb_Chr19g0129141 Lupinus albus HOM05D006242 ORTHO05D007936 2.3e-104 382.9 295 63.4
EL10Ac7g16757 Beta vulgaris HOM05D006242 ORTHO05D007936 4.0e-104 382.1 293 64.5
Cc09_g05610 Coffea canephora HOM05D006242 ORTHO05D007936 5.2e-104 381.7 274 69.3
Peaxi162Scf00198g01026 Petunia axillaris HOM05D006242 ORTHO05D007936 2.0e-103 379.8 291 64.9
SalBow7G3063 Salvia bowleyana HOM05D006242 ORTHO05D007936 2.0e-103 379.8 297 63.3
ClCG01G025640 Citrullus lanatus HOM05D006242 ORTHO05D007936 4.4e-103 378.6 291 66.0
Migut.K01175 Erythranthe guttata HOM05D006242 ORTHO05D007936 4.4e-103 378.6 294 64.3
CsaV3_6G052870 Cucumis sativus L. HOM05D006242 ORTHO05D007936 1.7e-102 376.7 291 66.0
Sed0024740 Sechium edule HOM05D006242 ORTHO05D007936 1.4e-101 373.6 294 64.3
THA.LOC104798560 Tarenaya hassleriana HOM05D006242 ORTHO05D007936 3.1e-101 372.5 361 55.4
Medtr1g050428 Medicago truncatula HOM05D006242 ORTHO05D007936 1.2e-100 370.5 297 59.6
Ca_19722_v3 Cicer arietinum L. HOM05D006242 ORTHO05D007936 2.6e-100 369.4 289 61.2
CDE05G0364 Ceratophyllum demersum HOM05D006242 ORTHO05D007936 5.9e-100 368.2 294 61.9
CSS0025117 Camellia sinensis var. sinensis HOM05D006242 ORTHO05D007936 6.5e-99 364.8 238 74.8
Zm00001eb233240 Zea mays HOM05D006242 ORTHO05D007936 3.2e-98 362.5 290 60.0
Sp2g07040 Schrenkiella parvula HOM05D006242 ORTHO05D007936 4.2e-98 362.1 258 68.2
Sc17g0004220 Simmondsia chinensis HOM05D006242 ORTHO05D007936 8.0e-97 357.8 261 68.6
Glyma.02G163900 Glycine max HOM05D006242 ORTHO05D007936 4.0e-96 355.5 296 57.8
MELO3C007020.2 Cucumis melo HOM05D006242 ORTHO05D007936 6.8e-96 354.8 326 58.3
BcaC02g11584 Brassica carinata HOM05D006242 ORTHO05D007936 8.8e-96 354.4 292 62.7
SpUn0157_0010 Schrenkiella parvula HOM05D006242 ORTHO05D007936 8.8e-96 354.4 273 65.2
Nitab4.5_0000138g0120 Nicotiana tabacum HOM05D006242 ORTHO05D007936 5.7e-95 351.7 299 61.2
Hma1.2p1_1700F.1_g298210 Hydrangea macrophylla HOM05D006242 ORTHO05D007936 1.6e-92 343.6 308 59.7
COL.COLO4_17635 Corchorus olitorius HOM05D006242 ORTHO05D007936 2.0e-92 343.2 229 71.6
SEGI_06259 Sequoiadendron giganteum HOM05D006242 ORTHO05D007936 4.0e-88 328.9 307 53.1
Psat6g094920 Pisum sativum HOM05D006242 ORTHO05D007936 2.0e-87 326.6 266 59.8
arahy.Tifrunner.gnm1.ann1.PA3R73 Arachis hypogaea HOM05D006242 ORTHO05D007936 5.4e-85 318.5 285 57.2
TPR.G10622 Trifolium pratense HOM05D006242 ORTHO05D007936 2.0e-84 316.6 297 53.2
Hma1.2p1_1499F.1_g287260 Hydrangea macrophylla HOM05D006242 ORTHO05D007936 2.7e-84 316.2 199 76.9
Lsat_1_v5_gn_6_96480 Lactuca sativa HOM05D006242 ORTHO05D007936 4.5e-84 315.5 227 70.0
HanXRQChr12g0369481 Helianthus annuus HOM05D006242 ORTHO05D007936 1.1e-82 310.8 241 66.8
Sopen02g010240 Solanum pennellii HOM05D006242 ORTHO05D007936 1.5e-82 310.5 202 73.8
Cc09_g05660 Coffea canephora HOM05D006242 ORTHO05D007936 4.2e-82 308.9 227 68.3
CiPaw.09G074600 Carya illinoinensis HOM05D006242 ORTHO05D007936 1.6e-81 307.0 209 70.8
Lj6g0012918 Lotus japonicus HOM05D006242 ORTHO05D007936 3.2e-77 292.7 205 66.8
AT2G35035 Arabidopsis thaliana HOM05D006242 ORTHO05D007936 4.1e-77 292.4 286 55.2
arahy.Tifrunner.gnm1.ann1.VZGM4G Arachis hypogaea HOM05D006242 ORTHO05D007936 2.3e-75 286.6 259 56.8
SMO203G0088 Selaginella moellendorffii HOM05D006242 ORTHO05D007936 9.5e-74 281.2 296 47.0
Phvul.007G242500 Phaseolus vulgaris HOM05D006242 ORTHO05D007936 2.6e-71 273.1 173 73.4
CARHR129200 Cardamine hirsuta HOM05D006242 ORTHO05D007936 2.2e-70 270.0 200 66.5
Pp3c12_18460 Physcomitrium patens HOM05D006242 ORTHO05D007936 3.7e-70 269.2 303 46.2
AagrBONN_evm.TU.Sc2ySwM_228.1028 Anthoceros agrestis HOM05D006242 ORTHO05D007936 2.0e-68 263.5 290 45.5
Mapoly0026s0041 Marchantia polymorpha HOM05D006242 ORTHO05D007936 2.3e-67 260.0 292 45.5
Nn7g38280 Nelumbo nucifera HOM05D006242 ORTHO05D007936 1.2e-65 254.2 293 49.1
TAR624G0344 Trochodendron aralioides HOM05D006242 ORTHO05D007936 1.5e-63 247.3 184 64.7
Glyma.20G074000 Glycine max HOM05D006242 ORTHO05D007936 2.1e-60 236.9 212 53.8
Cc09_g05680 Coffea canephora HOM05D006242 ORTHO05D007936 1.5e-58 230.7 190 62.6
ATR1094G001 Amborella trichopoda HOM05D006242 ORTHO05D007936 1.3e-54 217.6 201 53.2
AUR62040160 Chenopodium quinoa HOM05D006242 ORTHO05D007936 3.7e-54 216.1 173 61.3
VMungo0720G1734 Vigna mungo HOM05D006242 ORTHO05D007936 1.6e-52 210.7 185 58.9
CBR_g46754 Chara braunii HOM05D006242 ORTHO05D007936 4.2e-45 186.0 247 40.5
unitig_37.g12020 Utricularia gibba HOM05D006242 ORTHO05D007936 3.6e-41 172.9 124 65.3
HPP92_011011 Vanilla planifolia HOM05D006242 ORTHO05D007936 4.8e-41 172.6 145 63.4
GSVIVG01006138001 Vitis vinifera HOM05D006242 ORTHO05D007936 1.9e-37 160.6 95 81.1
Hma1.2p1_1700F.1_g298200 Hydrangea macrophylla HOM05D006242 ORTHO05D007936 3.0e-35 153.3 94 77.7
PRCOL_00002215 Prasinoderma coloniale HOM05D005590 ORTHO05D007084 8.7e-35 151.8 328 32.0
Hund15670 Selenicereus undatus HOM05D006242 ORTHO05D007936 7.4e-34 148.7 103 68.0
SGA_v2.0_scaffold4G02502 Striga asiatica HOM05D006242 ORTHO05D007936 4.8e-33 146.0 96 76.0
Aqoxy1G01391 Aquilegia oxysepala HOM05D006242 ORTHO05D007936 1.2e-31 141.4 94 72.3
Cc09_g05630 Coffea canephora HOM05D006242 ORTHO05D007936 9.9e-31 138.3 146 52.7
BraA05t20007Z Brassica rapa HOM05D003281 ORTHO05D004128 2.2e-30 137.1 127 56.7
AUR62037908 Chenopodium quinoa HOM05D006242 ORTHO05D007936 7.1e-29 132.1 107 59.8
MCO04G402 Micromonas commoda HOM05D006242 ORTHO05D007936 1.4e-24 117.9 173 35.8
Phvul.007G242466 Phaseolus vulgaris HOM05D006242 ORTHO05D007936 3.1e-24 116.7 107 52.3
BcaB02g09486 Brassica carinata HOM05D006242 ORTHO05D007936 4.0e-24 116.3 100 60.0
ATR1094G019 Amborella trichopoda HOM05D006242 ORTHO05D007936 1.5e-23 114.4 81 63.0
TPR.G22035 Trifolium pratense HOM05D006242 ORTHO05D007936 1.5e-23 114.4 85 63.5
HPP92_011012 Vanilla planifolia HOM05D006242 ORTHO05D007936 4.9e-22 109.4 122 47.5
Cc09_g05640 Coffea canephora HOM05D006242 ORTHO05D007936 8.4e-22 108.6 68 72.1
VMungo0720G2601 Vigna mungo HOM05D006242 ORTHO05D007936 7.1e-21 105.5 96 54.2
Cc09_g05720 Coffea canephora HOM05D006242 ORTHO05D007936 2.1e-20 104.0 67 70.1
Cfa025972 Carpinus fangiana HOM05D006242 ORTHO05D007936 1.8e-16 90.9 251 26.7
AUR62040161 Chenopodium quinoa HOM05D006242 ORTHO05D007936 2.4e-16 90.5 90 50.0
SHI14613 Sapria himalayana HOM05D000105 ORTHO05D000023 3.8e-14 83.2 55 65.5
CiPaw.09G216300 Carya illinoinensis HOM05D006242 ORTHO05D007936 3.2e-13 80.1 70 54.3
Os02g0173000 Oryza sativa ssp. japonica HOM05D006242 ORTHO05D007936 3.5e-12 76.6 53 64.2
Cc09_g05710 Coffea canephora HOM05D006242 ORTHO05D007936 4.6e-12 76.3 60 61.7
Hund15669 Selenicereus undatus HOM05D000023 ORTHO05D000014 3.3e-10 70.1 59 64.4


User provided reference genes

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