Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_007767 Daucus carota HOM05D007323 ORTHO05D009238 3.8e-126 454.9 242 100.0
Dinv41843 Davidia involucrata HOM05D007323 ORTHO05D009238 1.1e-67 260.8 223 67.7
HanXRQChr10g0309971 Helianthus annuus HOM05D007323 ORTHO05D009238 7.1e-64 248.1 231 61.9
Lsat_1_v5_gn_5_79461 Lactuca sativa HOM05D007323 ORTHO05D009238 2.1e-63 246.5 219 63.9
Actinidia03545 Actinidia chinensis HOM05D007323 ORTHO05D009238 1.0e-62 244.2 203 66.5
ECA234G0604 Erigeron canadensis HOM05D007323 ORTHO05D009238 1.3e-62 243.8 193 67.4
Rhsim10G0107900 Rhododendron simsii HOM05D007323 ORTHO05D009238 3.9e-62 242.3 175 74.3
Duzib150G1239 Durio zibethinus HOM05D007323 ORTHO05D009238 5.1e-62 241.9 205 65.4
Thecc.09G063400 Theobroma cacao HOM05D007323 ORTHO05D009238 1.1e-61 240.7 227 61.2
Cc08_g01150 Coffea canephora HOM05D007323 ORTHO05D009238 5.7e-61 238.4 237 60.8
Potri.006G220800 Populus trichocarpa HOM05D007323 ORTHO05D009238 9.6e-61 237.7 204 65.2
COL.COLO4_21139 Corchorus olitorius HOM05D007323 ORTHO05D009238 1.6e-60 236.9 205 62.4
MSTRG.25986 Avicennia marina HOM05D007323 ORTHO05D009238 3.7e-60 235.7 202 65.8
Sabra06G0170600 Salix brachista HOM05D007323 ORTHO05D009238 4.8e-60 235.3 204 64.7
vmacro05236 Vaccinium macrocarpon HOM05D007323 ORTHO05D009238 8.2e-60 234.6 172 72.1
Hund03297 Selenicereus undatus HOM05D007323 ORTHO05D009238 1.4e-59 233.8 226 58.4
Manes.16G085700 Manihot esculenta HOM05D007323 ORTHO05D009238 3.1e-59 232.6 231 61.0
Nn8g38659 Nelumbo nucifera HOM05D007323 ORTHO05D009238 4.1e-59 232.3 196 66.3
GSVIVG01035470001 Vitis vinifera HOM05D007323 ORTHO05D009238 5.3e-59 231.9 182 66.5
Gorai.001G020100 Gossypium raimondii HOM05D007323 ORTHO05D009238 9.0e-59 231.1 221 62.9
Ciclev10009314m.g Citrus clementina HOM05D007323 ORTHO05D009238 1.5e-58 230.3 236 60.2
Lalb_Chr08g0244811 Lupinus albus HOM05D007323 ORTHO05D009238 2.6e-58 229.6 229 59.8
SGA_v2.0_scaffold20G09163 Striga asiatica HOM05D007323 ORTHO05D009238 2.6e-58 229.6 227 55.9
FvH4_2g30980 Fragaria vesca HOM05D007323 ORTHO05D009238 7.6e-58 228.0 219 62.6
Lj1g0021270 Lotus japonicus HOM05D007323 ORTHO05D009238 1.7e-57 226.9 209 63.6
Cfa017873 Carpinus fangiana HOM05D007323 ORTHO05D009238 2.2e-57 226.5 236 60.6
FAN20G2477 Fragaria x ananassa HOM05D007323 ORTHO05D009238 2.2e-57 226.5 219 62.1
FAN27G1709 Fragaria x ananassa HOM05D007323 ORTHO05D009238 2.2e-57 226.5 219 61.6
Sopen08g017220 Solanum pennellii HOM05D007323 ORTHO05D009238 2.9e-57 226.1 221 60.2
Nitab4.5_0002831g0040 Nicotiana tabacum HOM05D007323 ORTHO05D009238 3.8e-57 225.7 233 58.8
EL10Ac2g03780 Beta vulgaris HOM05D007323 ORTHO05D009238 5.0e-57 225.3 236 57.2
Migut.A00078 Erythranthe guttata HOM05D007323 ORTHO05D009238 5.0e-57 225.3 212 60.8
FAN24G0989 Fragaria x ananassa HOM05D007323 ORTHO05D009238 5.0e-57 225.3 219 62.1
Nitab4.5_0000446g0180 Nicotiana tabacum HOM05D007323 ORTHO05D009238 5.0e-57 225.3 220 60.0
Gohir.D07G019400 Gossypium hirsutum HOM05D007323 ORTHO05D009238 6.5e-57 224.9 220 62.3
TWI34G0887 Tripterygium wilfordii HOM05D007323 ORTHO05D009238 1.1e-56 224.2 227 59.9
Sc06g0001110 Simmondsia chinensis HOM05D007323 ORTHO05D009238 1.4e-56 223.8 193 63.2
ClCG08G009880 Citrullus lanatus HOM05D007323 ORTHO05D009238 1.9e-56 223.4 205 64.9
Atru.chr7.1847 Acer truncatum HOM05D007323 ORTHO05D009238 3.2e-56 222.6 172 68.6
MELO3C011483.2 Cucumis melo HOM05D007323 ORTHO05D009238 4.2e-56 222.2 205 65.4
CiPaw.16G068300 Carya illinoinensis HOM05D007323 ORTHO05D009238 5.5e-56 221.9 205 63.4
Ca_15835_v3 Cicer arietinum L. HOM05D007323 ORTHO05D009238 5.5e-56 221.9 226 59.3
CsaV3_6G031970 Cucumis sativus L. HOM05D007323 ORTHO05D009238 5.5e-56 221.9 205 65.4
PGR031G0894 Punica granatum HOM05D007323 ORTHO05D009238 5.5e-56 221.9 193 61.7
QL02p017014 Quercus lobata HOM05D007323 ORTHO05D009238 7.2e-56 221.5 193 65.3
MD15G1049800 Malus domestica HOM05D007323 ORTHO05D009238 1.6e-55 220.3 230 60.9
Eucgr.B01965 Eucalyptus grandis HOM05D007323 ORTHO05D009238 4.6e-55 218.8 193 63.2
TPR.G3557 Trifolium pratense HOM05D007323 ORTHO05D009238 4.6e-55 218.8 196 63.3
VMungo1309G0522 Vigna mungo HOM05D007323 ORTHO05D009238 4.6e-55 218.8 205 62.4
Glyma.06G055900 Glycine max HOM05D007323 ORTHO05D009238 6.1e-55 218.4 230 57.8
PSO421G0353 Papaver somniferum HOM05D007323 ORTHO05D009238 1.0e-54 217.6 221 56.6
Phvul.009G082000 Phaseolus vulgaris HOM05D007323 ORTHO05D009238 1.0e-54 217.6 227 58.1
Medtr3g105050 Medicago truncatula HOM05D007323 ORTHO05D009238 1.8e-54 216.9 232 58.6
RcHm_v2.0_Chr6g0311811 Rosa chinensis HOM05D007323 ORTHO05D009238 1.8e-54 216.9 236 57.2
CANSAT25G3877 Cannabis sativa HOM05D007323 ORTHO05D009238 3.0e-54 216.1 214 59.3
unitig_8.g4975 Utricularia gibba HOM05D007323 ORTHO05D009238 3.0e-54 216.1 249 53.8
arahy.Tifrunner.gnm1.ann1.7DEW7H Arachis hypogaea HOM05D007323 ORTHO05D009238 3.9e-54 215.7 222 56.8
Prupe.1G404100 Prunus persica HOM05D007323 ORTHO05D009238 5.1e-54 215.3 238 58.4
Sed0017686 Sechium edule HOM05D007323 ORTHO05D009238 6.7e-54 214.9 243 56.8
Aqoxy7G01049 Aquilegia oxysepala HOM05D007323 ORTHO05D009238 8.7e-54 214.5 247 55.5
PSO063G6894 Papaver somniferum HOM05D007323 ORTHO05D009238 1.9e-53 213.4 200 59.5
HPP92_024332 Vanilla planifolia HOM05D007323 ORTHO05D009238 1.8e-51 206.8 192 58.9
Gohir.A07G019600 Gossypium hirsutum HOM05D007323 ORTHO05D009238 4.1e-51 205.7 200 61.0
arahy.Tifrunner.gnm1.ann1.287SRD Arachis hypogaea HOM05D007323 ORTHO05D009238 2.0e-50 203.4 215 57.7
CDE05G0862 Ceratophyllum demersum HOM05D007323 ORTHO05D009238 7.7e-50 201.4 194 57.2
Haze_18294 Corylus avellana HOM05D007323 ORTHO05D009238 7.7e-50 201.4 283 49.8
Thhalv10002091m.g Eutrema salsugineum HOM05D007323 ORTHO05D009238 1.0e-49 201.1 196 57.1
BcaC07g40825 Brassica carinata HOM05D007323 ORTHO05D009238 1.3e-49 200.7 208 56.7
C08p38170 Brassica napus HOM05D007323 ORTHO05D009238 1.3e-49 200.7 208 56.7
BolC8t51392H Brassica oleracea HOM05D007323 ORTHO05D009238 1.3e-49 200.7 208 56.7
BraA09t40931Z Brassica rapa HOM05D007323 ORTHO05D009238 3.8e-49 199.1 209 56.0
A09p55240 Brassica napus HOM05D007323 ORTHO05D009238 5.0e-49 198.7 211 55.5
BcaB08g35255 Brassica carinata HOM05D007323 ORTHO05D009238 1.1e-48 197.6 207 55.6
ATR0598G133 Amborella trichopoda HOM05D007323 ORTHO05D009238 1.9e-48 196.8 173 64.2
AL4G18960 Arabidopsis lyrata HOM05D007323 ORTHO05D009238 2.7e-47 193.0 229 51.5
Os03g0176700 Oryza sativa ssp. japonica HOM05D007323 ORTHO05D009238 4.6e-47 192.2 194 55.7
SEGI_00918 Sequoiadendron giganteum HOM05D007323 ORTHO05D009238 4.6e-47 192.2 233 50.6
Sp4g06990 Schrenkiella parvula HOM05D007323 ORTHO05D009238 1.4e-46 190.7 234 51.3
AUR62009079 Chenopodium quinoa HOM05D007323 ORTHO05D009238 1.8e-46 190.3 162 63.0
Aa31LG2G12250 Aethionema arabicum HOM05D007323 ORTHO05D009238 2.3e-46 189.9 208 53.8
Carub.0004s0625 Capsella rubella HOM05D007323 ORTHO05D009238 2.0e-45 186.8 242 48.3
THA.LOC104819519 Tarenaya hassleriana HOM05D007323 ORTHO05D009238 2.0e-45 186.8 209 54.1
AT2G26340 Arabidopsis thaliana HOM05D007323 ORTHO05D009238 5.7e-45 185.3 234 50.9
Zm00001eb005760 Zea mays HOM05D007323 ORTHO05D009238 1.8e-43 180.3 170 57.1
CARHR118450 Cardamine hirsuta HOM05D007323 ORTHO05D009238 2.4e-43 179.9 177 55.9
A09p54710 Brassica napus HOM05D007323 ORTHO05D009238 3.1e-43 179.5 166 58.4
Pp3c4_13280 Physcomitrium patens HOM05D007323 ORTHO05D009238 1.1e-40 171.0 175 56.0
Peaxi162Scf00486g01025 Petunia axillaris HOM05D007323 ORTHO05D009238 7.2e-40 168.3 220 51.4
Psat5g030560 Pisum sativum HOM05D007323 ORTHO05D009238 6.1e-39 165.2 187 56.1
Eucgr.B01870 Eucalyptus grandis HOM05D007323 ORTHO05D009238 2.0e-37 160.2 135 64.4
AagrBONN_evm.TU.Sc2ySwM_228.4439 Anthoceros agrestis HOM05D007323 ORTHO05D009238 3.3e-37 159.5 168 54.2
AUR62020587 Chenopodium quinoa HOM05D007323 ORTHO05D009238 4.4e-37 159.1 224 45.5
Mapoly0001s0019 Marchantia polymorpha HOM05D007323 ORTHO05D009238 1.6e-34 150.6 146 54.1
SMO239G0030 Selaginella moellendorffii HOM05D007323 ORTHO05D009238 7.7e-34 148.3 167 49.7
TAR636G1368 Trochodendron aralioides HOM05D007323 ORTHO05D009238 6.5e-33 145.2 133 60.9
CBR_g19268 Chara braunii HOM05D007323 ORTHO05D009238 2.0e-29 133.7 143 50.3
CSS0001075 Camellia sinensis var. sinensis HOM05D007323 ORTHO05D009238 5.7e-29 132.1 104 66.3
CSS0018719 Camellia sinensis var. sinensis HOM05D007323 ORTHO05D009238 5.7e-29 132.1 104 66.3
MBI13_g42814_MAGBIO Magnolia biondii HOM05D007323 ORTHO05D009238 1.6e-26 124.0 339 33.9
Cpa.g.sc126.24 Carica papaya HOM05D007323 ORTHO05D009238 5.5e-24 115.5 104 60.6
MD08G1071400 Malus domestica HOM05D007323 ORTHO05D009238 1.6e-15 87.4 64 75.0
Cre16.g684150 Chlamydomonas reinhardtii HOM05D007323 ORTHO05D009238 6.1e-15 85.5 150 39.3
Solyc08g061800.3 Solanum lycopersicum HOM05D007323 ORTHO05D009238 2.3e-09 67.0 87 50.6
Os03g0176800 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D294036 7.3e-08 62.0 148 29.7


User provided reference genes

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