Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_007752 Daucus carota HOM05D005696 ORTHO05D007099 6.7e-87 323.9 158 100.0
DCAR_013385 Daucus carota HOM05D005696 ORTHO05D007099 1.2e-64 250.0 158 75.3
COL.COLO4_29734 Corchorus olitorius HOM05D005696 ORTHO05D007099 6.1e-64 247.7 158 73.4
Thecc.05G089100 Theobroma cacao HOM05D005696 ORTHO05D007099 6.1e-64 247.7 158 73.4
Lsat_1_v5_gn_7_37701 Lactuca sativa HOM05D005696 ORTHO05D007099 1.4e-63 246.5 158 74.7
HanXRQChr03g0060731 Helianthus annuus HOM05D005696 ORTHO05D007099 2.3e-63 245.7 158 72.2
GSVIVG01033843001 Vitis vinifera HOM05D005696 ORTHO05D007099 2.3e-63 245.7 158 72.8
CsaV3_3G037280 Cucumis sativus L. HOM05D005696 ORTHO05D007099 1.1e-62 243.4 156 73.1
Dinv21209 Davidia involucrata HOM05D005696 ORTHO05D007099 2.0e-62 242.7 158 71.5
MELO3C009473.2 Cucumis melo HOM05D005696 ORTHO05D007099 5.7e-62 241.1 156 72.4
Sed0022063 Sechium edule HOM05D005696 ORTHO05D007099 7.4e-62 240.7 156 71.2
ClCG10G018970 Citrullus lanatus HOM05D005696 ORTHO05D007099 2.2e-61 239.2 156 72.4
TWI53G1247 Tripterygium wilfordii HOM05D005696 ORTHO05D007099 2.2e-61 239.2 158 72.2
Cfa016607 Carpinus fangiana HOM05D005696 ORTHO05D007099 2.8e-61 238.8 158 70.3
ECA240G0707 Erigeron canadensis HOM05D005696 ORTHO05D007099 3.7e-61 238.4 158 70.3
CiPaw.09G014000 Carya illinoinensis HOM05D005696 ORTHO05D007099 6.3e-61 237.7 158 69.0
Manes.08G025300 Manihot esculenta HOM05D005696 ORTHO05D007099 8.2e-61 237.3 158 69.6
Sed0001709 Sechium edule HOM05D005696 ORTHO05D007099 8.2e-61 237.3 156 71.8
PGR142G1689 Punica granatum HOM05D005696 ORTHO05D007099 1.8e-60 236.1 158 68.4
MD06G1040400 Malus domestica HOM05D005696 ORTHO05D007099 2.4e-60 235.7 146 74.7
Nn2g14158 Nelumbo nucifera HOM05D005696 ORTHO05D007099 2.4e-60 235.7 156 69.9
Duzib106G0894 Durio zibethinus HOM05D005696 ORTHO05D007099 3.1e-60 235.3 158 70.3
MSTRG.19260 Avicennia marina HOM05D005696 ORTHO05D007099 4.1e-60 235.0 158 70.3
Gorai.002G158300 Gossypium raimondii HOM05D005696 ORTHO05D007099 4.1e-60 235.0 148 73.6
Sabra18G0074700 Salix brachista HOM05D005696 ORTHO05D007099 5.3e-60 234.6 151 70.9
Atru.chr8.1538 Acer truncatum HOM05D005696 ORTHO05D007099 7.0e-60 234.2 158 68.4
CSS0033781 Camellia sinensis var. sinensis HOM05D005696 ORTHO05D007099 7.0e-60 234.2 149 73.8
Gohir.D01G127700 Gossypium hirsutum HOM05D005696 ORTHO05D007099 7.0e-60 234.2 148 73.6
QL07p039009 Quercus lobata HOM05D005696 ORTHO05D007099 7.0e-60 234.2 157 68.2
TWI77G0870 Tripterygium wilfordii HOM05D005696 ORTHO05D007099 1.2e-59 233.4 154 70.1
Ciclev10012817m.g Citrus clementina HOM05D005696 ORTHO05D007099 2.0e-59 232.6 158 68.4
Haze_19611 Corylus avellana HOM05D005696 ORTHO05D007099 2.0e-59 232.6 158 69.0
Sc02g0000250 Simmondsia chinensis HOM05D005696 ORTHO05D007099 2.0e-59 232.6 154 68.2
Hma1.2p1_0084F.1_g043820 Hydrangea macrophylla HOM05D005696 ORTHO05D007099 2.6e-59 232.3 158 68.4
Hma1.2p1_0820F.1_g223835 Hydrangea macrophylla HOM05D005696 ORTHO05D007099 2.6e-59 232.3 158 68.4
QL07p038757 Quercus lobata HOM05D005696 ORTHO05D007099 2.6e-59 232.3 157 67.5
Eucgr.K02040 Eucalyptus grandis HOM05D005696 ORTHO05D007099 3.5e-59 231.9 146 71.9
arahy.Tifrunner.gnm1.ann1.NXU1NB Arachis hypogaea HOM05D005696 ORTHO05D007099 4.5e-59 231.5 149 73.8
Oeu017678.1 Olea europaea HOM05D005696 ORTHO05D007099 4.5e-59 231.5 158 69.6
Oeu017679.1 Olea europaea HOM05D005696 ORTHO05D007099 4.5e-59 231.5 158 69.6
Rhsim03G0075100 Rhododendron simsii HOM05D005696 ORTHO05D007099 7.7e-59 230.7 147 73.5
Gohir.A01G138000 Gossypium hirsutum HOM05D005696 ORTHO05D007099 1.0e-58 230.3 148 72.3
CAN.G397.49 Capsicum annuum HOM05D005696 ORTHO05D007099 1.3e-58 229.9 150 71.3
Hma1.2p1_0232F.1_g097930 Hydrangea macrophylla HOM05D005696 ORTHO05D007099 2.9e-58 228.8 147 73.5
Ca_09006_v3 Cicer arietinum L. HOM05D005696 ORTHO05D007099 3.8e-58 228.4 149 70.5
Potri.018G086400 Populus trichocarpa HOM05D005696 ORTHO05D007099 3.8e-58 228.4 151 69.5
AUR62028517 Chenopodium quinoa HOM05D005696 ORTHO05D007099 5.0e-58 228.0 149 67.1
Lj2P1003T8 Lonicera japonica HOM05D005696 ORTHO05D007099 5.0e-58 228.0 149 69.1
TPR.G22495 Trifolium pratense HOM05D005696 ORTHO05D007099 5.0e-58 228.0 149 71.1
Lj2P137T17 Lonicera japonica HOM05D005696 ORTHO05D007099 6.5e-58 227.6 149 70.5
PGSC0003DMG400008956 Solanum tuberosum HOM05D005696 ORTHO05D007099 6.5e-58 227.6 151 68.9
Rhsim03G0187900 Rhododendron simsii HOM05D005696 ORTHO05D007099 8.5e-58 227.3 148 70.9
Medtr7g104610 Medicago truncatula HOM05D005696 ORTHO05D007099 1.1e-57 226.9 149 69.8
TPR.G19517 Trifolium pratense HOM05D005696 ORTHO05D007099 1.1e-57 226.9 149 71.1
RcHm_v2.0_Chr3g0473671 Rosa chinensis HOM05D005696 ORTHO05D007099 1.5e-57 226.5 151 71.5
CANSAT80G0528 Cannabis sativa HOM05D005696 ORTHO05D007099 3.2e-57 225.3 158 66.5
Cc03_g11090 Coffea canephora HOM05D005696 ORTHO05D007099 4.2e-57 224.9 149 68.5
MD14G1023000 Malus domestica HOM05D005696 ORTHO05D007099 4.2e-57 224.9 149 70.5
FvH4_6g18700 Fragaria vesca HOM05D005696 ORTHO05D007099 5.5e-57 224.6 151 70.2
Sopen09g004540 Solanum pennellii HOM05D005696 ORTHO05D007099 5.5e-57 224.6 151 68.2
Ah.01g020980 Amaranthus hybridus HOM05D005696 ORTHO05D007099 7.2e-57 224.2 149 67.8
EL10Ac7g16916 Beta vulgaris HOM05D005696 ORTHO05D007099 7.2e-57 224.2 147 70.1
TAR374G1347 Trochodendron aralioides HOM05D005696 ORTHO05D007099 9.4e-57 223.8 147 70.7
HanXRQChr07g0189921 Helianthus annuus HOM05D005696 ORTHO05D007099 1.6e-56 223.0 157 68.2
Nitab4.5_0000794g0110 Nicotiana tabacum HOM05D005696 ORTHO05D007099 1.6e-56 223.0 146 69.2
FAN14G5868 Fragaria x ananassa HOM05D005696 ORTHO05D007099 2.7e-56 222.2 151 69.5
Solyc09g009780.4 Solanum lycopersicum HOM05D005696 ORTHO05D007099 2.7e-56 222.2 151 67.5
Aqoxy1G00460 Aquilegia oxysepala HOM05D005696 ORTHO05D007099 3.6e-56 221.9 147 67.3
SalBow3G1016 Salvia bowleyana HOM05D005696 ORTHO05D007099 3.6e-56 221.9 156 66.0
SGA_v2.0_scaffold75G24749 Striga asiatica HOM05D005696 ORTHO05D007099 3.6e-56 221.9 149 67.1
Lalb_Chr01g0018151 Lupinus albus HOM05D005696 ORTHO05D007099 6.1e-56 221.1 145 71.7
FAN05G4755 Fragaria x ananassa HOM05D005696 ORTHO05D007099 8.0e-56 220.7 151 68.9
Glyma.19G194929 Glycine max HOM05D005696 ORTHO05D007099 8.0e-56 220.7 147 69.4
VMungo1383G2828 Vigna mungo HOM05D005696 ORTHO05D007099 8.0e-56 220.7 147 70.7
Glyma.03G195900 Glycine max HOM05D005696 ORTHO05D007099 8.8e-55 217.2 149 67.1
Psat3g033280 Pisum sativum HOM05D005696 ORTHO05D007099 8.8e-55 217.2 147 68.7
SalBow6G6426 Salvia bowleyana HOM05D005696 ORTHO05D007099 8.8e-55 217.2 145 67.6
Phvul.001G189800 Phaseolus vulgaris HOM05D005696 ORTHO05D007099 1.1e-54 216.9 147 69.4
Prupe.7G110200 Prunus persica HOM05D005696 ORTHO05D007099 1.5e-54 216.5 143 71.3
TPR.G30027 Trifolium pratense HOM05D005696 ORTHO05D007099 2.0e-54 216.1 151 64.9
PSO339G3505 Papaver somniferum HOM05D005696 ORTHO05D007099 2.6e-54 215.7 147 66.7
MBI04_g14262_MAGBIO Magnolia biondii HOM05D005696 ORTHO05D007099 3.3e-54 215.3 144 68.1
CiPaw.10G009800 Carya illinoinensis HOM05D005696 ORTHO05D007099 1.7e-53 213.0 138 71.0
PSO384G1553 Papaver somniferum HOM05D005696 ORTHO05D007099 1.7e-53 213.0 144 66.7
Aa31LG5G12820 Aethionema arabicum HOM05D005696 ORTHO05D007099 2.8e-53 212.2 146 67.8
Cpa.g.sc5.19 Carica papaya HOM05D005696 ORTHO05D007099 2.8e-53 212.2 152 63.8
Aqoxy2G01202 Aquilegia oxysepala HOM05D005696 ORTHO05D007099 3.7e-53 211.8 145 64.8
unitig_744.g24697 Utricularia gibba HOM05D001616 ORTHO05D007099 1.1e-52 210.3 156 59.6
THA.LOC104820979 Tarenaya hassleriana HOM05D005696 ORTHO05D007099 1.4e-52 209.9 150 66.7
AT5G15770 Arabidopsis thaliana HOM05D005696 ORTHO05D007099 2.4e-52 209.1 144 66.7
AL6G26610 Arabidopsis lyrata HOM05D005696 ORTHO05D007099 1.2e-51 206.8 146 65.1
Dinv31687 Davidia involucrata HOM05D005696 ORTHO05D010438 1.6e-51 206.5 137 71.5
Carub.0006s1392 Capsella rubella HOM05D005696 ORTHO05D007099 2.7e-51 205.7 146 65.1
Aa31LG11G13810 Aethionema arabicum HOM05D005696 ORTHO05D007099 2.2e-50 202.6 146 64.4
SHI28289 Sapria himalayana HOM05D005696 ORTHO05D007099 2.2e-50 202.6 144 66.0
C02p07960 Brassica napus HOM05D005696 ORTHO05D007099 5.0e-50 201.4 144 63.2
BolC9t58974H Brassica oleracea HOM05D005696 ORTHO05D007099 1.1e-49 200.3 144 63.2
C09p61330 Brassica napus HOM05D005696 ORTHO05D007099 1.5e-49 199.9 144 63.2
A10p23260 Brassica napus HOM05D005696 ORTHO05D007099 1.9e-49 199.5 144 62.5
BraA10t44394Z Brassica rapa HOM05D005696 ORTHO05D007099 2.5e-49 199.1 144 62.5
Thhalv10014892m.g Eutrema salsugineum HOM05D005696 ORTHO05D007099 2.5e-49 199.1 143 63.6
Sp6g28350 Schrenkiella parvula HOM05D005696 ORTHO05D007099 4.2e-49 198.4 143 63.6
BraA02t05292Z Brassica rapa HOM05D005696 ORTHO05D007099 5.5e-49 198.0 144 61.8
BcaC03g18448 Brassica carinata HOM05D005696 ORTHO05D007099 9.4e-49 197.2 144 61.8
BolC2t06719H Brassica oleracea HOM05D005696 ORTHO05D007099 9.4e-49 197.2 144 61.8
A02p03210 Brassica napus HOM05D005696 ORTHO05D007099 1.2e-48 196.8 144 61.1
BcaNung02203 Brassica carinata HOM05D005696 ORTHO05D007099 3.6e-48 195.3 144 61.1
CARHR197560 Cardamine hirsuta HOM05D005696 ORTHO05D007099 4.7e-48 194.9 146 60.3
ATR0618G201 Amborella trichopoda HOM05D005696 ORTHO05D007099 8.8e-47 190.7 144 59.7
ATR0605G169 Amborella trichopoda HOM05D005696 ORTHO05D007099 1.3e-45 186.8 143 57.3
SEGI_17930 Sequoiadendron giganteum HOM05D005696 ORTHO05D007099 2.2e-45 186.0 147 57.8
HPP92_015765 Vanilla planifolia HOM05D005696 ORTHO05D007099 6.3e-45 184.5 148 58.1
Peaxi162Scf00006g00016 Petunia axillaris HOM05D005696 ORTHO05D007099 1.2e-43 180.3 113 75.2
FAN09G4491 Fragaria x ananassa HOM05D005696 ORTHO05D007099 3.5e-43 178.7 120 70.8
BcaC04g18939 Brassica carinata HOM05D005696 ORTHO05D007099 2.2e-42 176.0 144 58.3
AagrBONN_evm.TU.Sc2ySwM_344.341 Anthoceros agrestis HOM05D005696 ORTHO05D007099 9.8e-38 160.6 146 52.1
Peaxi162Scf00068g02511 Petunia axillaris HOM05D005696 ORTHO05D007099 4.9e-37 158.3 109 68.8
Os09g0488000 Oryza sativa ssp. japonica HOM05D005696 ORTHO05D007099 2.7e-35 152.5 144 48.6
Zm00001eb189250 Zea mays HOM05D005696 ORTHO05D007099 2.7e-35 152.5 144 50.0
SMO364G0918 Selaginella moellendorffii HOM05D005696 ORTHO05D007099 1.0e-34 150.6 131 53.4
Mapoly0046s0019 Marchantia polymorpha HOM05D005696 ORTHO05D007099 1.7e-34 149.8 156 49.4
Migut.C00979 Erythranthe guttata HOM05D005696 ORTHO05D007099 1.9e-33 146.4 99 64.6
Os02g0717700 Oryza sativa ssp. japonica HOM05D005696 ORTHO05D007099 5.6e-33 144.8 145 48.3
Aqoxy5G03051 Aquilegia oxysepala HOM05D005696 ORTHO05D007099 3.4e-30 135.6 94 62.8
VMungo0540G0323 Vigna mungo HOM05D005696 ORTHO05D007099 3.4e-30 135.6 132 53.8
MCO13G065 Micromonas commoda HOM05D005696 ORTHO05D007099 8.3e-29 131.0 143 47.6
PRCOL_00001568 Prasinoderma coloniale HOM05D005696 ORTHO05D007099 3.5e-27 125.6 142 47.2
SEGI_26718 Sequoiadendron giganteum HOM05D005696 ORTHO05D007099 4.6e-27 125.2 96 59.4
Cre12.g560200 Chlamydomonas reinhardtii HOM05D005696 ORTHO05D007099 4.3e-25 118.6 141 46.1
CBR_g37710 Chara braunii HOM05D005696 ORTHO05D007099 7.5e-22 107.8 142 39.4
VMungo1383G2413 Vigna mungo HOM05D005696 ORTHO05D007099 7.5e-22 107.8 147 42.2
MD12G1036200 Malus domestica HOM05D005696 ORTHO05D007099 1.3e-21 107.1 75 66.7
AagrBONN_evm.TU.Sc2ySwM_362.2223 Anthoceros agrestis HOM05D005696 ORTHO05D007099 9.2e-20 100.9 84 52.4
Pp3c14_20090 Physcomitrium patens HOM05D005696 ORTHO05D007099 6.0e-19 98.2 85 55.3


User provided reference genes

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