Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_007694 Daucus carota HOM05D005797 ORTHO05D006479 7.7e-278 959.9 509 100.0
DCAR_005590 Daucus carota HOM05D001479 ORTHO05D006479 6.5e-83 312.4 487 43.5
Dinv38477 Davidia involucrata HOM05D005797 ORTHO05D006479 6.3e-38 162.9 581 28.7
GSVIVG01007552001 Vitis vinifera HOM05D005797 ORTHO05D006479 2.3e-35 154.5 548 27.0
CSS0028554 Camellia sinensis var. sinensis HOM05D005797 ORTHO05D006479 4.3e-34 150.2 539 27.3
Rhsim01G0114700 Rhododendron simsii HOM05D005797 ORTHO05D006479 1.6e-33 148.3 571 28.2
TAR629G0979 Trochodendron aralioides HOM05D005797 ORTHO05D006479 1.7e-30 138.3 558 26.3
CSS0021207 Camellia sinensis var. sinensis HOM05D005797 ORTHO05D006479 2.4e-29 134.4 515 27.0
CSS0032554 Camellia sinensis var. sinensis HOM05D005797 ORTHO05D006479 2.4e-29 134.4 514 27.0
CiPaw.11G012700 Carya illinoinensis HOM05D005797 ORTHO05D006479 5.4e-29 133.3 574 25.6
Nitab4.5_0010042g0010 Nicotiana tabacum HOM05D005797 ORTHO05D006479 9.2e-29 132.5 508 25.8
Nitab4.5_0003282g0040 Nicotiana tabacum HOM05D005797 ORTHO05D006479 1.2e-28 132.1 543 26.0
Haze_07281 Corylus avellana HOM05D005797 ORTHO05D006479 2.0e-28 131.3 521 31.3
MELO3C002331.2 Cucumis melo HOM05D005797 ORTHO05D006479 2.7e-28 131.0 578 25.1
Eucgr.K02760 Eucalyptus grandis HOM05D005797 ORTHO05D006479 6.0e-28 129.8 537 26.1
CANSAT80G2591 Cannabis sativa HOM05D005797 ORTHO05D006479 1.0e-27 129.0 546 24.7
CsaV3_1G009280 Cucumis sativus L. HOM05D005797 ORTHO05D006479 1.0e-27 129.0 571 25.4
QL10p005358 Quercus lobata HOM05D005797 ORTHO05D006479 2.3e-27 127.9 573 26.0
ClCG03G003480 Citrullus lanatus HOM05D005797 ORTHO05D006479 4.3e-26 123.6 553 24.2
Prupe.5G157600 Prunus persica HOM05D005797 ORTHO05D006479 4.4e-23 113.6 303 31.7
Solyc03g007140.3 Solanum lycopersicum HOM05D005797 ORTHO05D006479 7.5e-23 112.8 525 24.2
PGSC0003DMG400031024 Solanum tuberosum HOM05D005797 ORTHO05D006479 2.2e-22 111.3 518 24.9
CAN.G769.1 Capsicum annuum HOM05D005797 ORTHO05D006479 2.9e-22 110.9 513 26.9
CAN.G1022.3 Capsicum annuum HOM05D005797 ORTHO05D006479 6.4e-22 109.8 533 24.2
Nn3g16589 Nelumbo nucifera HOM05D005797 ORTHO05D006479 8.3e-22 109.4 578 24.4
MD06G1157600 Malus domestica HOM05D005797 ORTHO05D006479 1.1e-21 109.0 201 37.8
EL10Ac7g18068 Beta vulgaris HOM05D005797 ORTHO05D006479 4.1e-21 107.1 563 25.6
Sopen03g003130 Solanum pennellii HOM05D005797 ORTHO05D006479 4.1e-21 107.1 516 23.1
Nitab4.5_0010931g0020 Nicotiana tabacum HOM05D005797 ORTHO05D006479 5.4e-21 106.7 530 23.6
Peaxi162Scf00536g00111 Petunia axillaris HOM05D005797 ORTHO05D006479 7.1e-21 106.3 520 23.8
Potri.012G093200 Populus trichocarpa HOM05D005797 ORTHO05D006479 7.1e-21 106.3 268 28.0
Actinidia19380 Actinidia chinensis HOM05D005797 ORTHO05D006479 3.5e-20 104.0 187 36.9
Solyc03g111500.3 Solanum lycopersicum HOM05D005797 ORTHO05D006479 3.5e-20 104.0 512 24.0
AUR62025735 Chenopodium quinoa HOM05D005797 ORTHO05D006479 4.6e-20 103.6 532 23.3
Ciclev10019558m.g Citrus clementina HOM05D005797 ORTHO05D006479 2.3e-19 101.3 274 31.0
TWI39G1083 Tripterygium wilfordii HOM05D005797 ORTHO05D006479 2.3e-19 101.3 246 29.3
Lsat_1_v5_gn_4_78921 Lactuca sativa HOM05D005797 ORTHO05D006479 3.9e-19 100.5 572 23.8
CAN.G472.30 Capsicum annuum HOM05D005797 ORTHO05D006479 1.1e-18 99.0 606 24.8
vmacro21190 Vaccinium macrocarpon HOM05D005797 ORTHO05D006479 1.1e-18 99.0 529 26.7
AUR62001271 Chenopodium quinoa HOM05D005797 ORTHO05D006479 1.5e-18 98.6 523 22.8
ECA232G3585 Erigeron canadensis HOM05D005797 ORTHO05D006479 3.3e-18 97.4 142 37.3
Lalb_Chr23g0273471 Lupinus albus HOM05D005797 ORTHO05D006479 3.3e-18 97.4 256 27.7
PGR044G0013 Punica granatum HOM05D005797 ORTHO05D006479 3.3e-18 97.4 535 23.2
PGSC0003DMG401015175 Solanum tuberosum HOM05D005797 ORTHO05D006479 4.3e-18 97.1 509 22.2
SGA_v2.0_scaffold172G39027 Striga asiatica HOM05D005797 ORTHO05D006479 5.6e-18 96.7 525 25.1
MSTRG.9312 Avicennia marina HOM05D005797 ORTHO05D006479 7.3e-18 96.3 247 31.2
Sc10g0010330 Simmondsia chinensis HOM05D005797 ORTHO05D006479 7.3e-18 96.3 244 30.3
QL05p054837 Quercus lobata HOM05D005797 ORTHO05D006479 9.5e-18 95.9 199 35.7
Sed0027282 Sechium edule HOM05D005797 ORTHO05D006479 9.5e-18 95.9 568 23.4
Atru.chr9.1003 Acer truncatum HOM05D005797 ORTHO05D006479 3.6e-17 94.0 581 22.5
CSS0013181 Camellia sinensis var. sinensis HOM05D005797 ORTHO05D006479 1.4e-16 92.0 229 30.6
Peaxi162Scf00089g00723 Petunia axillaris HOM05D005797 ORTHO05D006479 1.8e-16 91.7 586 21.5
Hund05629 Selenicereus undatus HOM05D005797 ORTHO05D006479 2.3e-16 91.3 549 26.6
FAN13G0931 Fragaria x ananassa HOM05D005797 ORTHO05D006479 4.0e-16 90.5 289 27.7
Sopen03g030640 Solanum pennellii HOM05D005797 ORTHO05D006479 1.2e-15 89.0 499 22.8
Oeu036024.1 Olea europaea HOM05D005797 ORTHO05D006479 1.5e-15 88.6 179 35.2
arahy.Tifrunner.gnm1.ann1.NX8KLK Arachis hypogaea HOM05D005797 ORTHO05D006479 3.4e-15 87.4 190 32.1
Nitab4.5_0002062g0010 Nicotiana tabacum HOM05D005797 ORTHO05D006479 4.4e-15 87.0 455 22.9
Lj5A100T65 Lonicera japonica HOM05D005797 ORTHO05D006479 5.8e-15 86.7 569 22.8
arahy.Tifrunner.gnm1.ann1.7Y7E6F Arachis hypogaea HOM05D005797 ORTHO05D006479 1.3e-14 85.5 618 22.7
EL10Ac7g18067 Beta vulgaris HOM05D005797 ORTHO05D006479 1.3e-14 85.5 330 26.4
Glyma.04G192400 Glycine max HOM05D005797 ORTHO05D006479 1.3e-14 85.5 141 33.3
FvH4_5g07280 Fragaria vesca HOM05D005797 ORTHO05D006479 2.2e-14 84.7 289 27.0
FAN18G3318 Fragaria x ananassa HOM05D005797 ORTHO05D006479 2.2e-14 84.7 289 27.0
FAN04G0892 Fragaria x ananassa HOM05D005797 ORTHO05D006479 6.4e-14 83.2 278 26.6
FAN08G2881 Fragaria x ananassa HOM05D005797 ORTHO05D006479 8.3e-14 82.8 296 26.7
PSO063G1422 Papaver somniferum HOM05D005797 ORTHO05D006479 1.4e-13 82.0 146 37.0
Nn3g16591 Nelumbo nucifera HOM05D005797 ORTHO05D006479 3.2e-13 80.9 101 43.6
PGSC0003DMG400034759 Solanum tuberosum HOM05D005797 ORTHO05D006479 4.1e-13 80.5 131 37.4
CAN.G1022.5 Capsicum annuum HOM05D005797 ORTHO05D006479 7.1e-13 79.7 95 44.2
PGSC0003DMG400044028 Solanum tuberosum HOM05D005797 ORTHO05D006479 9.2e-13 79.3 131 35.9
CSS0048062 Camellia sinensis var. sinensis HOM05D005797 ORTHO05D006479 1.2e-12 79.0 68 45.6
Migut.O00498 Erythranthe guttata HOM05D005797 ORTHO05D006479 2.1e-12 78.2 509 23.8
Sed0007512 Sechium edule HOM05D005797 ORTHO05D006479 2.1e-12 78.2 107 36.4
Hund18537 Selenicereus undatus HOM05D005797 ORTHO05D006479 3.5e-12 77.4 513 22.0
Sopen03g030540 Solanum pennellii HOM05D005797 ORTHO05D006479 1.0e-11 75.9 156 35.3
PGSC0003DMG400037834 Solanum tuberosum HOM05D005797 ORTHO05D006479 5.1e-11 73.6 97 38.1
Nn4g22471 Nelumbo nucifera HOM05D005797 ORTHO05D006479 6.6e-11 73.2 120 35.0
Solyc03g111410.3 Solanum lycopersicum HOM05D005797 ORTHO05D006479 2.5e-10 71.2 140 34.3
Psat5g141720 Pisum sativum HOM05D005797 ORTHO05D006479 5.6e-10 70.1 551 22.0
Nn5g29405 Nelumbo nucifera HOM05D000823 ORTHO05D000088 7.3e-10 69.7 121 33.1
TPR.G26145 Trifolium pratense HOM05D005797 ORTHO05D006479 7.3e-10 69.7 172 28.5
Ciclev10023279m.g Citrus clementina HOM05D005797 ORTHO05D006479 9.6e-10 69.3 67 41.8
Aqoxy3G01381 Aquilegia oxysepala HOM05D005797 ORTHO05D006479 2.1e-09 68.2 620 20.8
SalBow1G3539 Salvia bowleyana HOM05D005797 ORTHO05D006479 2.8e-09 67.8 560 21.6
Oeu021116.1 Olea europaea HOM05D007775 ORTHO05D009858 1.1e-08 65.9 135 31.1
Ca_16094_v3 Cicer arietinum L. HOM05D005797 ORTHO05D006479 1.8e-08 65.1 467 21.8
Hund05637 Selenicereus undatus HOM05D005797 ORTHO05D006479 1.8e-08 65.1 63 44.4
Os02g0598200 Oryza sativa ssp. japonica HOM05D005797 ORTHO05D006479 2.4e-08 64.7 308 25.0
Potri.010G191500 Populus trichocarpa HOM05D000395 ORTHO05D000088 2.4e-08 64.7 118 31.4
SEGI_28063 Sequoiadendron giganteum HOM05D000823 ORTHO05D000088 2.4e-08 64.7 130 32.3
SEGI_34521 Sequoiadendron giganteum HOM05D000823 ORTHO05D000088 2.4e-08 64.7 133 33.1
HPP92_021432 Vanilla planifolia HOM05D022286 ORTHO05D006479 3.1e-08 64.3 67 40.3
HPP92_027093 Vanilla planifolia HOM05D022286 ORTHO05D006479 3.1e-08 64.3 67 40.3
CAN.G352.1 Capsicum annuum HOM05D005797 ORTHO05D006479 5.2e-08 63.5 226 25.2
SEGI_18580 Sequoiadendron giganteum HOM05D000823 ORTHO05D000088 5.2e-08 63.5 138 28.3
COL.COLO4_11739 Corchorus olitorius HOM05D000222 ORTHO05D000329 6.8e-08 63.2 99 31.3
RcHm_v2.0_Chr7g0191351 Rosa chinensis HOM05D005797 ORTHO05D006479 8.9e-08 62.8 63 34.9
EL10Ac8g19102 Beta vulgaris HOM05D000823 ORTHO05D000088 1.2e-07 62.4 118 33.1
SEGI_01735 Sequoiadendron giganteum HOM05D000823 ORTHO05D000088 1.2e-07 62.4 132 31.1
SEGI_11266 Sequoiadendron giganteum HOM05D005797 ORTHO05D000088 1.2e-07 62.4 132 30.3
PGSC0003DMG400035342 Solanum tuberosum HOM05D005797 ORTHO05D006479 1.5e-07 62.0 88 36.4
Hund05636 Selenicereus undatus HOM05D005797 ORTHO05D006479 2.6e-07 61.2 160 30.0
MBI11_g20093_MAGBIO Magnolia biondii HOM05D005797 ORTHO05D006479 3.4e-07 60.8 63 36.5
Hund05642 Selenicereus undatus HOM05D005797 ORTHO05D006479 3.4e-07 60.8 63 42.9
PGSC0003DMG400031023 Solanum tuberosum HOM05D005797 ORTHO05D006479 3.4e-07 60.8 458 21.8
SEGI_17947 Sequoiadendron giganteum HOM05D000823 ORTHO05D000088 5.8e-07 60.1 189 30.7
ATR0626G172 Amborella trichopoda HOM05D000823 ORTHO05D000088 9.9e-07 59.3 102 31.4
BcaC04g23179 Brassica carinata HOM05D000823 ORTHO05D000088 9.9e-07 59.3 123 29.3
Prupe.4G178100 Prunus persica HOM05D000823 ORTHO05D000088 1.3e-06 58.9 173 30.1
TAR626G0173 Trochodendron aralioides HOM05D005797 ORTHO05D006479 1.3e-06 58.9 49 40.8
FAN08G3323 Fragaria x ananassa HOM05D000823 ORTHO05D000088 1.7e-06 58.5 94 37.2
SEGI_06639 Sequoiadendron giganteum HOM05D000823 ORTHO05D000088 1.7e-06 58.5 134 30.6
SEGI_41472 Sequoiadendron giganteum HOM05D000823 ORTHO05D006479 1.7e-06 58.5 134 30.6
MELO3C007521.2 Cucumis melo HOM05D000823 ORTHO05D000088 2.2e-06 58.2 102 33.3
SEGI_21306 Sequoiadendron giganteum HOM05D000004 ORTHO05D006479 3.8e-06 57.4 131 30.5
SEGI_37905 Sequoiadendron giganteum HOM05D000823 ORTHO05D000088 3.8e-06 57.4 106 31.1
TAR376G0237 Trochodendron aralioides HOM05D000823 ORTHO05D000088 4.9e-06 57.0 139 26.6
Aqoxy1G02821 Aquilegia oxysepala HOM05D000395 ORTHO05D000088 8.4e-06 56.2 56 41.1
A09p09600 Brassica napus HOM05D000823 ORTHO05D000088 8.4e-06 56.2 103 29.1
HanXRQChr16g0497931 Helianthus annuus HOM05D005797 ORTHO05D006479 8.4e-06 56.2 81 35.8


User provided reference genes

Program Settings