Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_007669 Daucus carota HOM05D005491 ORTHO05D006973 1.8e-201 705.7 355 100.0
Dinv20356 Davidia involucrata HOM05D005491 ORTHO05D006973 2.9e-106 389.4 294 67.0
GSVIVG01016137001 Vitis vinifera HOM05D005491 ORTHO05D006973 6.1e-104 381.7 325 62.5
Lj6C21T3 Lonicera japonica HOM05D005491 ORTHO05D006973 2.0e-102 376.7 341 57.8
CSS0040638 Camellia sinensis var. sinensis HOM05D005491 ORTHO05D006973 1.4e-100 370.5 328 60.7
RcHm_v2.0_Chr2g0150111 Rosa chinensis HOM05D005491 ORTHO05D006973 1.8e-100 370.2 316 61.1
PGR102G1295 Punica granatum HOM05D005491 ORTHO05D006973 5.9e-99 365.2 329 57.8
MD09G1158800 Malus domestica HOM05D005491 ORTHO05D006973 1.0e-98 364.4 315 59.7
Rhsim12G0214300 Rhododendron simsii HOM05D005491 ORTHO05D006973 5.0e-98 362.1 324 60.5
Nitab4.5_0001691g0110 Nicotiana tabacum HOM05D005491 ORTHO05D006973 8.5e-98 361.3 326 59.5
vmacro17061 Vaccinium macrocarpon HOM05D005491 ORTHO05D006973 1.9e-97 360.1 332 60.5
Nitab4.5_0002885g0050 Nicotiana tabacum HOM05D005491 ORTHO05D006973 5.5e-97 358.6 326 58.9
FvH4_6g37280 Fragaria vesca HOM05D005491 ORTHO05D006973 7.2e-97 358.2 315 59.4
Potri.010G250200 Populus trichocarpa HOM05D005491 ORTHO05D006973 7.2e-97 358.2 354 57.3
Sc15g0000930 Simmondsia chinensis HOM05D005491 ORTHO05D006973 1.2e-96 357.5 315 60.6
Peaxi162Scf00038g02533 Petunia axillaris HOM05D005491 ORTHO05D006973 1.6e-96 357.1 289 65.4
Atru.chr1.2698 Acer truncatum HOM05D005491 ORTHO05D006973 2.1e-96 356.7 291 62.9
TAR383G0879 Trochodendron aralioides HOM05D005491 ORTHO05D006973 2.1e-96 356.7 264 67.0
Gorai.009G118600 Gossypium raimondii HOM05D005491 ORTHO05D006973 6.1e-96 355.1 317 60.6
Manes.16G045400 Manihot esculenta HOM05D005491 ORTHO05D006973 1.0e-95 354.4 324 58.6
Gohir.D05G114500 Gossypium hirsutum HOM05D005491 ORTHO05D006973 1.4e-95 354.0 317 60.6
PGSC0003DMG400009162 Solanum tuberosum HOM05D005491 ORTHO05D006973 2.3e-95 353.2 321 61.1
Lj3g0002967 Lotus japonicus HOM05D005491 ORTHO05D006973 5.1e-95 352.1 299 59.5
Nn2g12576 Nelumbo nucifera HOM05D005491 ORTHO05D006973 6.7e-95 351.7 313 58.5
Eucgr.F04012 Eucalyptus grandis HOM05D005491 ORTHO05D006973 8.8e-95 351.3 280 64.3
Hund18611 Selenicereus undatus HOM05D005491 ORTHO05D006973 2.0e-94 350.1 317 56.5
AUR62025582 Chenopodium quinoa HOM05D005491 ORTHO05D006973 2.6e-94 349.7 292 61.3
CANSAT01G1753 Cannabis sativa HOM05D005491 ORTHO05D006973 3.3e-94 349.4 331 56.8
arahy.Tifrunner.gnm1.ann1.5V72PU Arachis hypogaea HOM05D005491 ORTHO05D006973 9.7e-94 347.8 318 58.2
Thecc.06G064400 Theobroma cacao HOM05D005491 ORTHO05D006973 2.2e-93 346.7 319 58.3
Ca_20955_v3 Cicer arietinum L. HOM05D005491 ORTHO05D006973 4.8e-93 345.5 337 54.0
Ah.15g094670 Amaranthus hybridus HOM05D005491 ORTHO05D006973 8.2e-93 344.7 319 56.1
arahy.Tifrunner.gnm1.ann1.PDFG4L Arachis hypogaea HOM05D005491 ORTHO05D006973 1.1e-92 344.4 318 57.5
Lalb_Chr04g0264721 Lupinus albus HOM05D005491 ORTHO05D006973 1.1e-92 344.4 267 62.9
A01p33690 Brassica napus HOM05D005491 ORTHO05D006973 1.8e-92 343.6 321 58.3
FAN02G3895 Fragaria x ananassa HOM05D005491 ORTHO05D006973 1.8e-92 343.6 364 53.3
TPR.G38706 Trifolium pratense HOM05D005491 ORTHO05D006973 1.8e-92 343.6 268 62.7
BraA01t03481Z Brassica rapa HOM05D005491 ORTHO05D006973 2.4e-92 343.2 310 59.7
Ciclev10026115m.g Citrus clementina HOM05D005491 ORTHO05D006973 4.1e-92 342.4 294 59.5
BcaC09g49056 Brassica carinata HOM05D005491 ORTHO05D006973 7.0e-92 341.7 328 56.1
CARHR097080 Cardamine hirsuta HOM05D005491 ORTHO05D006973 9.1e-92 341.3 285 60.4
C01p43060 Brassica napus HOM05D005491 ORTHO05D006973 1.5e-91 340.5 328 56.1
BolC1t04253H Brassica oleracea HOM05D005491 ORTHO05D006973 1.5e-91 340.5 328 56.1
CAN.G790.23 Capsicum annuum HOM05D005491 ORTHO05D006973 1.5e-91 340.5 331 57.7
FAN14G5581 Fragaria x ananassa HOM05D005491 ORTHO05D005725 1.5e-91 340.5 319 57.1
Carub.0003s2116 Capsella rubella HOM05D005491 ORTHO05D006973 2.0e-91 340.1 319 57.4
Lj6A3G42 Lonicera japonica HOM05D005491 ORTHO05D006973 2.0e-91 340.1 337 55.2
Duzib192G0032 Durio zibethinus HOM05D005491 ORTHO05D006973 3.5e-91 339.3 328 57.0
AL3G35200 Arabidopsis lyrata HOM05D005491 ORTHO05D006973 5.9e-91 338.6 300 59.7
VMungo0647G0411 Vigna mungo HOM05D005491 ORTHO05D006973 1.0e-90 337.8 281 61.9
Psat7g263520 Pisum sativum HOM05D005491 ORTHO05D006973 1.7e-90 337.0 289 58.5
CiPaw.02G049600 Carya illinoinensis HOM05D005491 ORTHO05D006973 2.2e-90 336.7 319 56.1
Glyma.08G222600 Glycine max HOM05D005491 ORTHO05D006973 2.2e-90 336.7 268 62.3
BcaC05g28263 Brassica carinata HOM05D005491 ORTHO05D006973 5.0e-90 335.5 279 60.9
C05p42580 Brassica napus HOM05D005491 ORTHO05D006973 5.0e-90 335.5 279 60.9
Medtr4g006200 Medicago truncatula HOM05D005491 ORTHO05D006973 5.0e-90 335.5 268 60.1
Phvul.008G255600 Phaseolus vulgaris HOM05D005491 ORTHO05D006973 6.5e-90 335.1 291 58.8
TWI18G1464 Tripterygium wilfordii HOM05D005491 ORTHO05D006973 6.5e-90 335.1 282 60.6
FAN09G1743 Fragaria x ananassa HOM05D005491 ORTHO05D006973 8.5e-90 334.7 293 58.7
BolC5t32978H Brassica oleracea HOM05D005491 ORTHO05D006973 1.1e-89 334.3 279 60.9
BraA05t21640Z Brassica rapa HOM05D005491 ORTHO05D006973 1.1e-89 334.3 284 60.6
A05p27490 Brassica napus HOM05D005491 ORTHO05D006973 1.5e-89 334.0 279 61.3
Sp3g19180 Schrenkiella parvula HOM05D005491 ORTHO05D006973 1.5e-89 334.0 303 58.7
Lsat_1_v5_gn_4_88641 Lactuca sativa HOM05D005491 ORTHO05D006973 2.5e-89 333.2 357 53.2
AT3G21200 Arabidopsis thaliana HOM05D005491 ORTHO05D006973 3.2e-89 332.8 321 56.4
Cc04_g00370 Coffea canephora HOM05D005491 ORTHO05D006973 5.5e-89 332.0 342 54.7
Thhalv10021146m.g Eutrema salsugineum HOM05D005491 ORTHO05D006973 7.2e-89 331.6 307 57.7
Thhalv10021148m.g Eutrema salsugineum HOM05D005491 ORTHO05D006973 7.2e-89 331.6 307 57.7
Aa31LG8G7890 Aethionema arabicum HOM05D005491 ORTHO05D006973 9.4e-89 331.3 291 58.8
MELO3C006296.2 Cucumis melo HOM05D005491 ORTHO05D006973 1.6e-88 330.5 291 59.1
CsaV3_3G010780 Cucumis sativus L. HOM05D005491 ORTHO05D006973 1.6e-88 330.5 293 58.4
EL10Ac7g18224 Beta vulgaris HOM05D005491 ORTHO05D006973 3.0e-87 326.2 374 51.1
BcaB06g26202 Brassica carinata HOM05D005491 ORTHO05D006973 3.9e-87 325.9 318 56.0
Sopen03g041620 Solanum pennellii HOM05D005491 ORTHO05D006973 8.8e-87 324.7 266 62.8
THA.LOC104817926 Tarenaya hassleriana HOM05D005491 ORTHO05D006973 2.0e-86 323.6 291 59.8
BcaB04g20605 Brassica carinata HOM05D005491 ORTHO05D006973 3.3e-86 322.8 328 54.9
Sed0002659 Sechium edule HOM05D005491 ORTHO05D006973 3.3e-86 322.8 291 56.4
Solyc03g123880.3 Solanum lycopersicum HOM05D005491 ORTHO05D006973 4.4e-86 322.4 272 61.4
SGA_v2.0_scaffold4G02103 Striga asiatica HOM05D005491 ORTHO05D006973 4.4e-86 322.4 318 53.1
Migut.D00894 Erythranthe guttata HOM05D005491 ORTHO05D006973 7.4e-86 321.6 316 55.4
SalBow7G0632 Salvia bowleyana HOM05D005491 ORTHO05D006973 2.2e-85 320.1 280 59.6
BcaNung05297 Brassica carinata HOM05D005491 ORTHO05D006973 2.0e-83 313.5 328 53.4
Sed0027406 Sechium edule HOM05D005491 ORTHO05D006973 3.5e-83 312.8 313 53.0
ClCG05G003150 Citrullus lanatus HOM05D005491 ORTHO05D006973 4.5e-83 312.4 341 51.6
PSO063G4509 Papaver somniferum HOM05D005491 ORTHO05D006973 1.1e-81 307.8 354 51.1
Oeu023761.1 Olea europaea HOM05D005491 ORTHO05D006973 1.9e-81 307.0 252 61.1
PSO782G2961 Papaver somniferum HOM05D005491 ORTHO05D006973 2.5e-81 306.6 350 51.1
CDE02G1684 Ceratophyllum demersum HOM05D005491 ORTHO05D006973 3.2e-81 306.2 264 57.6
Actinidia31136 Actinidia chinensis HOM05D005491 ORTHO05D006973 1.2e-80 304.3 301 54.8
AUR62001366 Chenopodium quinoa HOM05D004422 ORTHO05D007331 1.2e-80 304.3 233 63.5
Aqoxy7G03200 Aquilegia oxysepala HOM05D005491 ORTHO05D006973 2.3e-79 300.1 335 50.1
HanXRQChr09g0277401 Helianthus annuus HOM05D005491 ORTHO05D006973 4.0e-79 299.3 299 55.2
Gohir.A05G114100 Gossypium hirsutum HOM05D005491 ORTHO05D006973 2.0e-78 297.0 314 54.1
Sabra10G0194700 Salix brachista HOM05D005491 ORTHO05D006973 7.5e-78 295.0 433 43.4
CDE05G1859 Ceratophyllum demersum HOM05D005491 ORTHO05D006973 1.7e-77 293.9 252 56.7
ATR0580G202 Amborella trichopoda HOM05D005491 ORTHO05D006973 6.3e-77 292.0 255 58.0
MBI14_g30702_MAGBIO Magnolia biondii HOM05D005491 ORTHO05D006973 1.6e-75 287.3 365 45.2
unitig_8.g3563 Utricularia gibba HOM05D006979 ORTHO05D008857 4.5e-75 285.8 285 55.1
ECA232G0321 Erigeron canadensis HOM05D005491 ORTHO05D006973 2.3e-63 246.9 260 51.5
COL.COLO4_31205 Corchorus olitorius HOM05D005491 ORTHO05D006973 1.2e-62 244.6 198 63.1
Zm00001eb319280 Zea mays HOM05D005491 ORTHO05D006973 1.7e-61 240.7 280 44.3
Haze_10760 Corylus avellana HOM05D005491 ORTHO05D006973 8.3e-61 238.4 183 63.4
HPP92_013427 Vanilla planifolia HOM05D005491 ORTHO05D006973 1.6e-59 234.2 265 48.3
Zm00001eb170870 Zea mays HOM05D005491 ORTHO05D006973 3.5e-51 206.5 311 40.2
Pp3c7_5080 Physcomitrium patens HOM05D005491 ORTHO05D006973 7.8e-51 205.3 326 39.3
AagrBONN_evm.TU.Sc2ySwM_368.2001 Anthoceros agrestis HOM05D005491 ORTHO05D006973 3.0e-50 203.4 257 41.2
Mapoly0005s0279 Marchantia polymorpha HOM05D005491 ORTHO05D006973 1.1e-49 201.4 278 40.3
Actinidia00637 Actinidia chinensis HOM05D005491 ORTHO05D006973 3.1e-47 193.4 224 49.1
MSTRG.4527 Avicennia marina HOM05D005491 ORTHO05D006973 1.2e-43 181.4 139 62.6
SGA_v2.0_scaffold68G22804 Striga asiatica HOM05D005491 ORTHO05D006973 6.8e-39 165.6 194 46.9
Haze_10765 Corylus avellana HOM05D005491 ORTHO05D006973 2.2e-29 134.0 152 55.3
arahy.Tifrunner.gnm1.ann1.S1MR2L Arachis hypogaea HOM05D005491 ORTHO05D006973 2.9e-29 133.7 103 64.1
Prupe.3G167000 Prunus persica HOM05D005491 ORTHO05D006973 1.1e-28 131.7 112 65.2
Glyma.14G098400 Glycine max HOM05D005491 ORTHO05D006973 2.4e-28 130.6 109 56.0
Potri.008G008801 Populus trichocarpa HOM05D005491 ORTHO05D006973 5.4e-28 129.4 111 62.2
Cpa.g.c38087 Carica papaya HOM05D005491 ORTHO05D006973 7.1e-28 129.0 149 53.7
SMO146G0309 Selaginella moellendorffii HOM05D005491 ORTHO05D006973 7.1e-28 129.0 152 42.8
Cfa005563 Carpinus fangiana HOM05D005491 ORTHO05D006973 2.1e-27 127.5 149 56.4
RcHm_v2.0_Chr3g0481151 Rosa chinensis HOM05D000090 ORTHO05D000083 7.8e-27 125.6 76 72.4
MD17G1145100 Malus domestica HOM05D005491 ORTHO05D006973 1.5e-25 121.3 119 53.8
Medtr4g005800 Medicago truncatula HOM05D005491 ORTHO05D006973 2.1e-24 117.5 124 46.8
Cpa.g.c36201.2 Carica papaya HOM05D005491 ORTHO05D006973 3.8e-21 106.7 74 66.2
Medtr3g006055 Medicago truncatula HOM05D005491 ORTHO05D006973 3.8e-21 106.7 180 35.6
Pp3c11_26760 Physcomitrium patens HOM05D005491 ORTHO05D006973 4.9e-21 106.3 133 42.9
SEGI_08052 Sequoiadendron giganteum HOM05D005491 ORTHO05D006973 3.5e-19 100.1 116 37.9
Haze_10762 Corylus avellana HOM05D005491 ORTHO05D006973 3.3e-17 93.6 130 51.5
MCO13G019 Micromonas commoda HOM05D005491 ORTHO05D006973 4.3e-17 93.2 276 28.6
Gorai.002G157400 Gossypium raimondii HOM05D005491 ORTHO05D006973 9.9e-14 82.0 104 51.9
Gohir.D01G126833 Gossypium hirsutum HOM05D005491 ORTHO05D006973 1.3e-13 81.6 104 51.0
CBR_g22384 Chara braunii HOM05D005491 ORTHO05D006973 1.4e-12 78.2 204 29.4
Cre03.g156600 Chlamydomonas reinhardtii HOM05D005491 ORTHO05D006973 1.6e-11 74.7 288 26.4
Gohir.D06G077900 Gossypium hirsutum HOM05D005491 ORTHO05D006973 1.6e-11 74.7 87 52.9
Gorai.003G079200 Gossypium raimondii HOM05D005491 ORTHO05D006973 7.9e-11 72.4 81 53.1
Gorai.013G054800 Gossypium raimondii HOM05D005491 ORTHO05D006973 7.9e-11 72.4 67 62.7
Nn6g35127 Nelumbo nucifera HOM05D005491 ORTHO05D006973 3.3e-09 67.0 110 43.6
Gorai.012G122800 Gossypium raimondii HOM05D005491 ORTHO05D006973 5.6e-09 66.2 52 63.5
SEGI_00240 Sequoiadendron giganteum HOM05D005491 ORTHO05D006973 5.6e-09 66.2 158 36.7
PRCOL_00005430 Prasinoderma coloniale HOM05D005491 ORTHO05D006973 1.3e-08 65.1 250 25.6
FAN14G3055 Fragaria x ananassa HOM05D002283 ORTHO05D005725 9.0e-07 58.9 56 57.1
Cre02.g098250 Chlamydomonas reinhardtii HOM05D006013 ORTHO05D007383 1.2e-06 58.5 257 23.7
Eucgr.K01500 Eucalyptus grandis HOM05D006013 ORTHO05D007383 1.5e-06 58.2 273 24.9
Lsat_1_v5_gn_1_59740 Lactuca sativa HOM05D006013 ORTHO05D007383 4.5e-06 56.6 267 27.3
FvH4_6g36141 Fragaria vesca HOM05D002283 ORTHO05D005725 5.8e-06 56.2 83 45.8


User provided reference genes

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