Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_007668 Daucus carota HOM05D004074 ORTHO05D004717 4.2e-50 201.1 102 100.0
Psat7g263760 Pisum sativum HOM05D004074 ORTHO05D004717 2.5e-26 122.1 66 80.3
Hma1.2p1_0039F.1_g024790 Hydrangea macrophylla HOM05D004074 ORTHO05D004717 1.2e-25 119.8 64 82.8
arahy.Tifrunner.gnm1.ann1.9ZAP4M Arachis hypogaea HOM05D004074 ORTHO05D004717 2.8e-25 118.6 80 71.2
ATR0580G305 Amborella trichopoda HOM05D004074 ORTHO05D004717 8.0e-25 117.1 67 79.1
CAN.G1073.1 Capsicum annuum HOM05D004074 ORTHO05D004717 8.0e-25 117.1 65 78.5
Nn5g30428 Nelumbo nucifera HOM05D004074 ORTHO05D004717 8.0e-25 117.1 65 80.0
Psat1g059640 Pisum sativum HOM05D004074 ORTHO05D004717 1.0e-24 116.7 66 80.3
QL05p083316 Quercus lobata HOM05D004074 ORTHO05D004717 1.0e-24 116.7 67 77.6
Hund14448 Selenicereus undatus HOM05D004074 ORTHO05D004717 1.0e-24 116.7 63 79.4
TWI77G0047 Tripterygium wilfordii HOM05D004074 ORTHO05D004717 1.0e-24 116.7 64 81.2
ClCG09G001480 Citrullus lanatus HOM05D004074 ORTHO05D004717 1.4e-24 116.3 64 81.2
Ciclev10026787m.g Citrus clementina HOM05D004074 ORTHO05D004717 1.4e-24 116.3 74 74.3
Actinidia31138 Actinidia chinensis HOM05D004074 ORTHO05D004717 2.3e-24 115.5 64 78.1
Nn6g31693 Nelumbo nucifera HOM05D004074 ORTHO05D004717 2.3e-24 115.5 65 78.5
Nn8g40291 Nelumbo nucifera HOM05D004074 ORTHO05D004717 2.3e-24 115.5 65 78.5
Rhsim08G0247900 Rhododendron simsii HOM05D004074 ORTHO05D004717 2.3e-24 115.5 68 75.0
TWI53G1078 Tripterygium wilfordii HOM05D004074 ORTHO05D004717 2.3e-24 115.5 64 79.7
Actinidia00635 Actinidia chinensis HOM05D004074 ORTHO05D004717 3.0e-24 115.2 64 78.1
Actinidia25993 Actinidia chinensis HOM05D004074 ORTHO05D004717 3.0e-24 115.2 64 78.1
Dinv20359 Davidia involucrata HOM05D004074 ORTHO05D004717 3.0e-24 115.2 64 76.6
Rhsim06G0076700 Rhododendron simsii HOM05D004074 ORTHO05D004717 3.0e-24 115.2 62 79.0
RcHm_v2.0_Chr2g0150171 Rosa chinensis HOM05D004074 ORTHO05D004717 4.0e-24 114.8 62 80.6
Actinidia38792 Actinidia chinensis HOM05D004074 ORTHO05D004717 5.2e-24 114.4 64 78.1
Gohir.D12G001400 Gossypium hirsutum HOM05D004074 ORTHO05D004717 5.2e-24 114.4 64 76.6
TAR626G1506 Trochodendron aralioides HOM05D004074 ORTHO05D004717 5.2e-24 114.4 61 82.0
FvH4_6g37330 Fragaria vesca HOM05D004074 ORTHO05D004717 6.8e-24 114.0 62 79.0
Gohir.A11G055200 Gossypium hirsutum HOM05D004074 ORTHO05D004717 6.8e-24 114.0 64 76.6
Gohir.D11G059000 Gossypium hirsutum HOM05D004074 ORTHO05D004717 6.8e-24 114.0 64 76.6
Gorai.007G063900 Gossypium raimondii HOM05D004074 ORTHO05D004717 6.8e-24 114.0 64 76.6
Lj3g0011227 Lotus japonicus HOM05D004074 ORTHO05D004717 6.8e-24 114.0 66 75.8
Manes.05G195000 Manihot esculenta HOM05D004074 ORTHO05D004717 6.8e-24 114.0 64 78.1
Nitab4.5_0002885g0120 Nicotiana tabacum HOM05D004074 ORTHO05D004717 6.8e-24 114.0 78 70.5
TAR383G0992 Trochodendron aralioides HOM05D004074 ORTHO05D004717 6.8e-24 114.0 66 74.2
Actinidia21867 Actinidia chinensis HOM05D004074 ORTHO05D004717 8.9e-24 113.6 64 78.1
AL1G59560 Arabidopsis lyrata HOM05D004074 ORTHO05D004717 8.9e-24 113.6 64 78.1
AT1G51650 Arabidopsis thaliana HOM05D004074 ORTHO05D004717 8.9e-24 113.6 64 78.1
CsaV3_7G033840 Cucumis sativus L. HOM05D004074 ORTHO05D004717 8.9e-24 113.6 64 78.1
MBI04_g18036_MAGBIO Magnolia biondii HOM05D004074 ORTHO05D004717 8.9e-24 113.6 68 76.5
Nitab4.5_0001691g0090 Nicotiana tabacum HOM05D004074 ORTHO05D004717 8.9e-24 113.6 60 80.0
TPR.G2285 Trifolium pratense HOM05D004074 ORTHO05D004717 8.9e-24 113.6 66 77.3
Aa31LG8G7900 Aethionema arabicum HOM05D004074 ORTHO05D004717 1.2e-23 113.2 64 78.1
CSS0037999 Camellia sinensis var. sinensis HOM05D004074 ORTHO05D004717 1.2e-23 113.2 64 78.1
CSS0039874 Camellia sinensis var. sinensis HOM05D004074 ORTHO05D004717 1.2e-23 113.2 64 78.1
COL.COLO4_13992 Corchorus olitorius HOM05D004074 ORTHO05D004717 1.2e-23 113.2 61 78.7
MELO3C024297.2 Cucumis melo HOM05D004074 ORTHO05D004717 1.2e-23 113.2 64 78.1
Duzib147G0570 Durio zibethinus HOM05D004074 ORTHO05D004717 1.2e-23 113.2 66 75.8
Thhalv10021996m.g Eutrema salsugineum HOM05D004074 ORTHO05D004717 1.2e-23 113.2 68 75.0
FAN14G4331 Fragaria x ananassa HOM05D004074 ORTHO05D004717 1.2e-23 113.2 60 81.7
Gorai.008G000800 Gossypium raimondii HOM05D004074 ORTHO05D004717 1.2e-23 113.2 64 75.0
CARHR041810 Cardamine hirsuta HOM05D004074 ORTHO05D004717 1.5e-23 112.8 64 76.6
Gohir.A12G001600 Gossypium hirsutum HOM05D004074 ORTHO05D004717 1.5e-23 112.8 62 75.8
Nitab4.5_0008628g0040 Nicotiana tabacum HOM05D004074 ORTHO05D004717 1.5e-23 112.8 61 78.7
Phvul.008G255900 Phaseolus vulgaris HOM05D004074 ORTHO05D004717 1.5e-23 112.8 66 77.3
vmacro18761 Vaccinium macrocarpon HOM05D004074 ORTHO05D004717 1.5e-23 112.8 70 68.6
FAN02G0872 Fragaria x ananassa HOM05D004074 ORTHO05D004717 2.0e-23 112.5 62 77.4
FAN05G0051 Fragaria x ananassa HOM05D004074 ORTHO05D004717 2.0e-23 112.5 62 77.4
FAN09G3199 Fragaria x ananassa HOM05D004074 ORTHO05D004717 2.0e-23 112.5 62 77.4
Nitab4.5_0000357g0290 Nicotiana tabacum HOM05D004074 ORTHO05D004717 2.0e-23 112.5 60 80.0
Sed0005809 Sechium edule HOM05D004074 ORTHO05D004717 2.0e-23 112.5 64 78.1
Cc01_g08930 Coffea canephora HOM05D004074 ORTHO05D004717 2.6e-23 112.1 64 75.0
ECA234G0987 Erigeron canadensis HOM05D004074 ORTHO05D004717 2.6e-23 112.1 67 76.1
Thecc.01G124200 Theobroma cacao HOM05D004074 ORTHO05D004717 2.6e-23 112.1 61 77.0
unitig_32.g11555 Utricularia gibba HOM05D004074 ORTHO05D004717 2.6e-23 112.1 64 75.0
Cpa.g.sc1009.1 Carica papaya HOM05D004074 ORTHO05D004717 3.4e-23 111.7 60 80.0
CDE02G0689 Ceratophyllum demersum HOM05D004074 ORTHO05D004717 3.4e-23 111.7 66 77.3
Haze_03743 Corylus avellana HOM05D004074 ORTHO05D004717 3.4e-23 111.7 63 77.8
Peaxi162Scf00038g02442 Petunia axillaris HOM05D004074 ORTHO05D004717 3.4e-23 111.7 86 62.8
PGSC0003DMG400028842 Solanum tuberosum HOM05D004074 ORTHO05D004717 3.4e-23 111.7 64 73.4
unitig_748.g7476 Utricularia gibba HOM05D004074 ORTHO05D004717 3.4e-23 111.7 64 73.4
Glyma.08G222900 Glycine max HOM05D004074 ORTHO05D004717 4.4e-23 111.3 74 73.0
Nitab4.5_0007548g0020 Nicotiana tabacum HOM05D004074 ORTHO05D004717 4.4e-23 111.3 64 75.0
Sopen12g024230 Solanum pennellii HOM05D004074 ORTHO05D004717 4.4e-23 111.3 64 73.4
VMungo0647G0339 Vigna mungo HOM05D001270 ORTHO05D001099 4.4e-23 111.3 91 60.4
CAN.G790.25 Capsicum annuum HOM05D004074 ORTHO05D004717 5.7e-23 110.9 78 66.7
Dinv37799 Davidia involucrata HOM05D004074 ORTHO05D004717 5.7e-23 110.9 64 73.4
Duzib264G1024 Durio zibethinus HOM05D004074 ORTHO05D004717 5.7e-23 110.9 66 74.2
Nitab4.5_0002661g0050 Nicotiana tabacum HOM05D004074 ORTHO05D004717 5.7e-23 110.9 84 63.1
BcaB04g19151 Brassica carinata HOM05D004074 ORTHO05D004717 7.5e-23 110.5 64 78.1
BcaC01g03518 Brassica carinata HOM05D004074 ORTHO05D004717 7.5e-23 110.5 64 78.1
CDE05G2863 Ceratophyllum demersum HOM05D004074 ORTHO05D004717 7.5e-23 110.5 66 75.8
Duzib187G1118 Durio zibethinus HOM05D004074 ORTHO05D004717 7.5e-23 110.5 64 73.4
HanXRQChr10g0311531 Helianthus annuus HOM05D004074 ORTHO05D004717 7.5e-23 110.5 64 75.0
HanXRQChr12g0359921 Helianthus annuus HOM05D004074 ORTHO05D004717 7.5e-23 110.5 64 75.0
MD09G1158500 Malus domestica HOM05D004074 ORTHO05D004717 7.5e-23 110.5 62 75.8
A08p02600 Brassica napus HOM05D004074 ORTHO05D004717 9.8e-23 110.2 64 75.0
BolC3t17439H Brassica oleracea HOM05D000606 ORTHO05D001265 9.8e-23 110.2 60 81.7
BraA03t13364Z Brassica rapa HOM05D000606 ORTHO05D001265 9.8e-23 110.2 60 81.7
BraA08t32299Z Brassica rapa HOM05D004074 ORTHO05D004717 9.8e-23 110.2 64 75.0
CARHR097100 Cardamine hirsuta HOM05D004074 ORTHO05D004717 9.8e-23 110.2 64 78.1
Medtr5g040610 Medicago truncatula HOM05D004074 ORTHO05D004717 9.8e-23 110.2 66 75.8
Prupe.3G167500 Prunus persica HOM05D004074 ORTHO05D004717 9.8e-23 110.2 62 75.8
Solyc12g055760.2 Solanum lycopersicum HOM05D004074 ORTHO05D004717 9.8e-23 110.2 64 71.9
Hund11291 Selenicereus undatus HOM05D004074 ORTHO05D004717 1.3e-22 109.8 63 76.2
Lsat_1_v5_gn_4_88780 Lactuca sativa HOM05D004074 ORTHO05D004717 1.7e-22 109.4 64 76.6
Lalb_Chr25g0278611 Lupinus albus HOM05D004074 ORTHO05D004717 1.7e-22 109.4 69 75.4
PGSC0003DMG402009187 Solanum tuberosum HOM05D004074 ORTHO05D004717 1.7e-22 109.4 64 70.3
BcaB04g20604 Brassica carinata HOM05D004074 ORTHO05D004717 2.2e-22 109.0 64 76.6
BcaNung05296 Brassica carinata HOM05D004074 ORTHO05D004717 2.2e-22 109.0 64 76.6
BraA01t03480Z Brassica rapa HOM05D004074 ORTHO05D004717 2.2e-22 109.0 64 75.0
CiPaw.01G088100 Carya illinoinensis HOM05D004074 ORTHO05D004717 2.2e-22 109.0 64 71.9
Solyc06g063220.3 Solanum lycopersicum HOM05D004074 ORTHO05D004717 2.2e-22 109.0 64 70.3
Sopen06g022670 Solanum pennellii HOM05D004074 ORTHO05D004717 2.2e-22 109.0 64 70.3
BolC8t49078H Brassica oleracea HOM05D004074 ORTHO05D004717 2.8e-22 108.6 62 77.4
Oeu040350.2 Olea europaea HOM05D004074 ORTHO05D004717 2.8e-22 108.6 66 69.7
PSO170G4934 Papaver somniferum HOM05D004074 ORTHO05D004717 2.8e-22 108.6 65 70.8
PSO339G3796 Papaver somniferum HOM05D004074 ORTHO05D004717 2.8e-22 108.6 65 70.8
QL05p083267 Quercus lobata HOM05D004074 ORTHO05D004717 2.8e-22 108.6 64 68.8
Aa31LG10G3130 Aethionema arabicum HOM05D004074 ORTHO05D004717 3.7e-22 108.2 60 78.3
Ah.07g199420 Amaranthus hybridus HOM05D004074 ORTHO05D004717 3.7e-22 108.2 65 72.3
BcaB04g17185 Brassica carinata HOM05D004074 ORTHO05D004717 3.7e-22 108.2 64 73.4
PGSC0003DMG400026508 Solanum tuberosum HOM05D004074 ORTHO05D004717 3.7e-22 108.2 64 70.3
A01p33680 Brassica napus HOM05D004074 ORTHO05D004717 4.9e-22 107.8 64 75.0
Carub.0001s4049 Capsella rubella HOM05D004074 ORTHO05D004717 4.9e-22 107.8 64 73.4
Migut.I01175 Erythranthe guttata HOM05D004074 ORTHO05D004717 4.9e-22 107.8 64 71.9
Glyma.07G003700 Glycine max HOM05D004074 ORTHO05D004717 4.9e-22 107.8 66 74.2
SHI21232 Sapria himalayana HOM05D004074 ORTHO05D004717 4.9e-22 107.8 67 71.6
Aqoxy7G03184 Aquilegia oxysepala HOM05D004074 ORTHO05D004717 6.3e-22 107.5 64 75.0
EL10Ac5g12205 Beta vulgaris HOM05D004074 ORTHO05D004717 6.3e-22 107.5 63 76.2
Thhalv10011901m.g Eutrema salsugineum HOM05D004074 ORTHO05D004717 6.3e-22 107.5 64 73.4
Aqoxy5G02869 Aquilegia oxysepala HOM05D004074 ORTHO05D004717 1.1e-21 106.7 61 77.0
BolC1t04251H Brassica oleracea HOM05D004074 ORTHO05D004717 1.1e-21 106.7 64 73.4
Sp1g38290 Schrenkiella parvula HOM05D004074 ORTHO05D004717 1.1e-21 106.7 64 71.9
Sp3g19200 Schrenkiella parvula HOM05D004074 ORTHO05D004717 1.1e-21 106.7 64 73.4
HPP92_021730 Vanilla planifolia HOM05D004074 ORTHO05D004717 1.1e-21 106.7 79 65.8
BcaC08g44915 Brassica carinata HOM05D004074 ORTHO05D004717 1.4e-21 106.3 64 73.4
Potri.008G008900 Populus trichocarpa HOM05D004074 ORTHO05D004717 1.4e-21 106.3 64 73.4
Potri.010G250000 Populus trichocarpa HOM05D004074 ORTHO05D004717 1.4e-21 106.3 64 73.4
Zm00001eb161770 Zea mays HOM05D004074 ORTHO05D004717 1.4e-21 106.3 64 71.9
Zm00001eb357940 Zea mays HOM05D004074 ORTHO05D004717 1.4e-21 106.3 64 71.9
A05p19470 Brassica napus HOM05D004074 ORTHO05D004717 1.8e-21 105.9 64 71.9
C06p25410 Brassica napus HOM05D004074 ORTHO05D004717 1.8e-21 105.9 62 75.8
BolC6t37702H Brassica oleracea HOM05D004074 ORTHO05D004717 1.8e-21 105.9 62 75.8
BraA05t20851Z Brassica rapa HOM05D004074 ORTHO05D004717 1.8e-21 105.9 64 71.9
Os08g0250200 Oryza sativa ssp. japonica HOM05D004074 ORTHO05D004717 1.8e-21 105.9 64 68.8
PGR102G2231 Punica granatum HOM05D004074 ORTHO05D004717 1.8e-21 105.9 64 70.3
C01p43050 Brassica napus HOM05D004074 ORTHO05D004717 2.4e-21 105.5 64 71.9
AUR62018789 Chenopodium quinoa HOM05D004074 ORTHO05D004717 3.1e-21 105.1 64 76.6
THA.LOC104821596 Tarenaya hassleriana HOM05D004074 ORTHO05D004717 3.1e-21 105.1 64 67.2
BcaB02g11264 Brassica carinata HOM05D004074 ORTHO05D004717 4.1e-21 104.8 64 71.9
BcaC08g43926 Brassica carinata HOM05D004074 ORTHO05D004717 7.0e-21 104.0 64 71.9
C06p13180 Brassica napus HOM05D004074 ORTHO05D004717 7.0e-21 104.0 64 71.9
BolC6t36474H Brassica oleracea HOM05D004074 ORTHO05D004717 7.0e-21 104.0 64 71.9
Sabra10G0194600 Salix brachista HOM05D004074 ORTHO05D004717 9.2e-21 103.6 97 56.7
Sabra08G0005100 Salix brachista HOM05D004074 ORTHO05D004717 1.2e-20 103.2 63 71.4
BcaC09g49057 Brassica carinata HOM05D004074 ORTHO05D004717 1.6e-20 102.8 60 73.3
SEGI_28642 Sequoiadendron giganteum HOM05D004074 ORTHO05D004717 1.6e-20 102.8 60 70.0
SGA_v2.0_scaffold122G33290 Striga asiatica HOM05D004074 ORTHO05D004717 2.0e-20 102.4 63 68.3
CANSAT01G1956 Cannabis sativa HOM05D004074 ORTHO05D004717 3.5e-20 101.7 64 68.8
BcaC03g13642 Brassica carinata HOM05D000239 ORTHO05D004717 5.9e-20 100.9 60 76.7
C02p10320 Brassica napus HOM05D004074 ORTHO05D004717 5.9e-20 100.9 60 76.7
Eucgr.F04009 Eucalyptus grandis HOM05D004074 ORTHO05D004717 1.0e-19 100.1 61 68.9
SGA_v2.0_scaffold71G24013 Striga asiatica HOM05D001270 ORTHO05D001099 2.9e-19 98.6 59 69.5
GSVIVG01037184001 Vitis vinifera HOM05D004074 ORTHO05D004717 1.5e-18 96.3 58 72.4
AagrBONN_evm.TU.Sc2ySwM_117.3571 Anthoceros agrestis HOM05D004074 ORTHO05D004717 6.1e-17 90.9 62 66.1
SalBow6G5392 Salvia bowleyana HOM05D004074 ORTHO05D004717 8.0e-17 90.5 64 60.9
MBI14_g24286_MAGBIO Magnolia biondii HOM05D004074 ORTHO05D004717 2.3e-16 89.0 47 78.7
AagrBONN_evm.TU.Sc2ySwM_344.1495 Anthoceros agrestis HOM05D004074 ORTHO05D004717 3.0e-16 88.6 62 64.5
HPP92_021648 Vanilla planifolia HOM05D004074 ORTHO05D004717 3.0e-16 88.6 61 65.6
SMO351G0623 Selaginella moellendorffii HOM05D004074 ORTHO05D004717 1.2e-15 86.7 57 61.4
GSVIVG01037963001 Vitis vinifera HOM05D004074 ORTHO05D004717 9.8e-15 83.6 46 76.1
Lsat_1_v5_gn_5_137500 Lactuca sativa HOM05D001270 ORTHO05D001099 2.9e-14 82.0 71 62.0
Mapoly0001s0230 Marchantia polymorpha HOM05D004074 ORTHO05D004717 3.7e-14 81.6 61 57.4
Pp3c1_12120 Physcomitrium patens HOM05D004074 ORTHO05D004717 2.4e-13 79.0 56 57.1
Pp3c2_24870 Physcomitrium patens HOM05D004074 ORTHO05D004717 2.4e-13 79.0 56 57.1
Thhalv10022333m.g Eutrema salsugineum HOM05D004074 ORTHO05D004717 5.4e-13 77.8 64 60.9
C02p45000 Brassica napus HOM05D000128 ORTHO05D000059 7.0e-13 77.4 44 81.8
PSO455G0136 Papaver somniferum HOM05D004074 ORTHO05D004717 6.0e-12 74.3 62 58.1
MCO11G253 Micromonas commoda HOM05D004074 ORTHO05D004717 2.3e-11 72.4 62 48.4
Pp3c1_10140 Physcomitrium patens HOM05D004074 ORTHO05D004717 1.5e-10 69.7 52 59.6
Medtr4g005960 Medicago truncatula HOM05D004074 ORTHO05D004717 1.9e-10 69.3 53 56.6
Zm00001eb394860 Zea mays HOM05D004074 ORTHO05D004717 3.3e-10 68.6 48 58.3
PRCOL_00000946 Prasinoderma coloniale HOM05D004074 ORTHO05D004717 2.1e-09 65.9 60 43.3
Cre10.g420700 Chlamydomonas reinhardtii HOM05D004074 ORTHO05D004717 1.7e-06 56.2 57 40.4


User provided reference genes

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