Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_007608 Daucus carota HOM05D004845 ORTHO05D005957 0.0e+00 2001.9 1100 100.0
DCAR_026375 Daucus carota HOM05D004845 ORTHO05D005957 1.8e-284 983.0 1244 54.7
Dinv30397 Davidia involucrata HOM05D004845 ORTHO05D005957 4.5e-214 749.2 1204 47.8
Dinv37932 Davidia involucrata HOM05D004845 ORTHO05D005957 5.2e-194 682.6 1249 44.6
QL05p015844 Quercus lobata HOM05D004845 ORTHO05D005957 5.7e-185 652.5 1231 43.3
vmacro18819 Vaccinium macrocarpon HOM05D004845 ORTHO05D005957 6.5e-181 639.0 1202 43.8
Duzib160G0801 Durio zibethinus HOM05D004845 ORTHO05D005957 7.5e-177 625.5 1213 41.8
Thecc.06G108000 Theobroma cacao HOM05D004845 ORTHO05D005957 2.0e-174 617.5 1225 41.5
Gohir.A05G133700 Gossypium hirsutum HOM05D004845 ORTHO05D005957 1.2e-171 608.2 1200 41.9
Potri.003G033100 Populus trichocarpa HOM05D004845 ORTHO05D005957 1.2e-171 608.2 1244 40.8
Rhsim08G0231600 Rhododendron simsii HOM05D004845 ORTHO05D005957 1.8e-170 604.4 1221 41.9
Gohir.D05G135700 Gossypium hirsutum HOM05D004845 ORTHO05D005957 7.5e-169 599.0 1202 41.3
RcHm_v2.0_Chr2g0142521 Rosa chinensis HOM05D004845 ORTHO05D005957 7.5e-169 599.0 1235 41.4
Atru.chr1.3636 Acer truncatum HOM05D004845 ORTHO05D005957 1.3e-168 598.2 1210 40.8
Gorai.009G139700 Gossypium raimondii HOM05D004845 ORTHO05D005957 1.1e-167 595.1 1196 41.6
Prupe.3G052500 Prunus persica HOM05D004845 ORTHO05D005957 5.4e-167 592.8 1199 40.9
Duzib235G0635 Durio zibethinus HOM05D004845 ORTHO05D005957 9.2e-167 592.0 1214 40.3
CiPaw.02G142000 Carya illinoinensis HOM05D004845 ORTHO05D005957 1.6e-166 591.3 1236 41.3
Cfa003605 Carpinus fangiana HOM05D004845 ORTHO05D005957 2.7e-166 590.5 1195 41.8
FvH4_6g32970 Fragaria vesca HOM05D004845 ORTHO05D005957 3.5e-166 590.1 1242 41.1
FAN14G1946 Fragaria x ananassa HOM05D004845 ORTHO05D005957 6.6e-165 585.9 1239 41.4
TAR629G3185 Trochodendron aralioides HOM05D004845 ORTHO05D005957 6.6e-165 585.9 1235 40.8
Sabra03G0019000 Salix brachista HOM05D004845 ORTHO05D005957 9.5e-164 582.0 1238 40.6
FAN02G0586 Fragaria x ananassa HOM05D004845 ORTHO05D005957 3.0e-162 577.0 1241 40.7
FAN09G4600 Fragaria x ananassa HOM05D004845 ORTHO05D005957 2.6e-161 573.9 1238 40.7
Cc04_g02180 Coffea canephora HOM05D004845 ORTHO05D005957 7.0e-159 565.8 1186 41.7
CANSAT56G3316 Cannabis sativa HOM05D004845 ORTHO05D005957 9.2e-159 565.5 1200 42.1
Manes.04G137600 Manihot esculenta HOM05D004845 ORTHO05D005957 1.2e-158 565.1 1201 40.8
MD09G1196000 Malus domestica HOM05D004845 ORTHO05D005957 3.0e-157 560.5 1217 40.1
GSVIVG01016889001 Vitis vinifera HOM05D004845 ORTHO05D005957 1.1e-156 558.5 1137 38.3
MSTRG.22604 Avicennia marina HOM05D004845 ORTHO05D005957 1.4e-154 551.6 1252 39.3
Sed0014548 Sechium edule HOM05D004845 ORTHO05D005957 1.4e-151 541.6 1241 39.5
MELO3C013040.2 Cucumis melo HOM05D004845 ORTHO05D005957 2.0e-150 537.7 1219 39.7
Ciclev10024729m.g Citrus clementina HOM05D004845 ORTHO05D005957 2.7e-150 537.3 1228 39.0
Nn1g08771 Nelumbo nucifera HOM05D004845 ORTHO05D005957 3.5e-150 537.0 1242 38.8
ClCG07G013620 Citrullus lanatus HOM05D004845 ORTHO05D005957 4.6e-150 536.6 1220 39.7
arahy.Tifrunner.gnm1.ann1.JSQ5P9 Arachis hypogaea HOM05D004845 ORTHO05D005957 1.0e-149 535.4 1199 38.8
CsaV3_3G044010 Cucumis sativus L. HOM05D004845 ORTHO05D005957 3.9e-149 533.5 1216 39.6
Glyma.07G012400 Glycine max HOM05D004845 ORTHO05D005957 9.5e-148 528.9 1214 39.3
Glyma.08G196100 Glycine max HOM05D004845 ORTHO05D005957 1.2e-147 528.5 1215 38.8
TWI31G1049 Tripterygium wilfordii HOM05D004845 ORTHO05D005957 2.3e-146 524.2 1229 39.8
Manes.11G028800 Manihot esculenta HOM05D004845 ORTHO05D005957 5.2e-146 523.1 1214 38.1
Peaxi162Scf00038g01322 Petunia axillaris HOM05D004845 ORTHO05D005957 8.3e-144 515.8 1229 39.5
Medtr8g015620 Medicago truncatula HOM05D004845 ORTHO05D005957 5.4e-143 513.1 1200 37.9
Lj3g0006882 Lotus japonicus HOM05D004845 ORTHO05D005957 3.5e-142 510.4 1232 38.1
Phvul.010G141800 Phaseolus vulgaris HOM05D004845 ORTHO05D005957 1.0e-141 508.8 1205 38.5
Sed0023831 Sechium edule HOM05D004845 ORTHO05D005957 2.3e-141 507.7 1186 39.0
FAN05G2503 Fragaria x ananassa HOM05D004845 ORTHO05D005957 2.5e-140 504.2 1388 36.2
arahy.Tifrunner.gnm1.ann1.7F0ZFP Arachis hypogaea HOM05D004845 ORTHO05D005957 1.6e-139 501.5 1236 37.5
Ca_23299_v3 Cicer arietinum L. HOM05D004845 ORTHO05D005957 1.2e-137 495.4 1228 36.7
Oeu052809.1 Olea europaea HOM05D004845 ORTHO05D005957 1.2e-137 495.4 1111 41.6
VMungo0331G0639 Vigna mungo HOM05D004845 ORTHO05D005957 2.0e-137 494.6 1232 38.1
Migut.I01002 Erythranthe guttata HOM05D004845 ORTHO05D005957 4.4e-137 493.4 1219 39.0
Lsat_1_v5_gn_4_95940 Lactuca sativa HOM05D004845 ORTHO05D005957 2.9e-136 490.7 1130 38.7
Sopen03g040190 Solanum pennellii HOM05D004845 ORTHO05D005957 1.1e-135 488.8 1255 40.5
HanXRQChr09g0276331 Helianthus annuus HOM05D004845 ORTHO05D005957 1.9e-135 488.0 1131 40.0
Solyc03g121380.3 Solanum lycopersicum HOM05D004845 ORTHO05D005957 3.2e-135 487.3 1234 40.1
COL.COLO4_30609 Corchorus olitorius HOM05D004845 ORTHO05D005957 2.1e-134 484.6 1083 36.2
Oeu026736.3 Olea europaea HOM05D004845 ORTHO05D005957 8.6e-133 479.2 1124 38.5
Hund07666 Selenicereus undatus HOM05D004845 ORTHO05D005957 1.8e-130 471.5 1185 38.4
ECA232G1750 Erigeron canadensis HOM05D004845 ORTHO05D005957 4.4e-129 466.8 1173 37.7
Sc12g0009860 Simmondsia chinensis HOM05D004845 ORTHO05D005957 5.8e-129 466.5 1216 37.3
THA.LOC104817934 Tarenaya hassleriana HOM05D004845 ORTHO05D005957 2.2e-128 464.5 1227 34.5
MD17G1176700 Malus domestica HOM05D004845 ORTHO05D005957 2.9e-128 464.2 1248 36.1
CAN.G1668.10 Capsicum annuum HOM05D004845 ORTHO05D005957 1.1e-127 462.2 1163 38.4
Actinidia32134 Actinidia chinensis HOM05D004845 ORTHO05D005957 2.1e-126 458.0 1071 40.0
Cpa.g.sc131.35 Carica papaya HOM05D004845 ORTHO05D005957 4.6e-126 456.8 1155 37.9
EL10Ac9g21102 Beta vulgaris HOM05D004845 ORTHO05D005957 1.5e-124 451.8 1178 38.3
PGR102G0505 Punica granatum HOM05D004845 ORTHO05D005957 3.6e-123 447.2 1185 38.4
Lj3g0020048 Lotus japonicus HOM05D004845 ORTHO05D005957 3.1e-122 444.1 1184 36.6
HanXRQChr05g0140141 Helianthus annuus HOM05D004845 ORTHO05D005957 7.6e-121 439.5 1123 37.4
Lalb_Chr04g0263091 Lupinus albus HOM05D004845 ORTHO05D005957 6.4e-120 436.4 1222 36.1
Aqoxy7G00060 Aquilegia oxysepala HOM05D004845 ORTHO05D005957 9.3e-119 432.6 1238 36.8
SGA_v2.0_scaffold71G23747 Striga asiatica HOM05D004845 ORTHO05D005957 1.6e-118 431.8 1105 35.9
PSO170G6909 Papaver somniferum HOM05D004845 ORTHO05D005957 5.3e-114 416.8 1185 36.5
AUR62023919 Chenopodium quinoa HOM05D004845 ORTHO05D005957 2.6e-113 414.5 1141 33.2
Nitab4.5_0004848g0010 Nicotiana tabacum HOM05D004845 ORTHO05D005957 9.9e-113 412.5 1029 39.5
THA.LOC104810560 Tarenaya hassleriana HOM05D004845 ORTHO05D005957 2.2e-112 411.4 1272 32.9
CDE10G0270 Ceratophyllum demersum HOM05D004845 ORTHO05D005957 3.3e-108 397.5 1186 34.0
Sp3g19330 Schrenkiella parvula HOM05D004845 ORTHO05D005957 9.6e-108 396.0 1120 33.8
AUR62038325 Chenopodium quinoa HOM05D004845 ORTHO05D005957 6.2e-107 393.3 1141 32.3
Thhalv10019924m.g Eutrema salsugineum HOM05D004845 ORTHO05D005957 1.2e-105 389.0 1176 35.9
ATR0730G184 Amborella trichopoda HOM05D004845 ORTHO05D005957 6.5e-104 383.3 1236 35.3
Carub.0003s2130 Capsella rubella HOM05D004845 ORTHO05D005957 7.1e-103 379.8 1195 34.6
AL3G35330 Arabidopsis lyrata HOM05D004845 ORTHO05D005957 2.1e-102 378.3 1183 34.8
AT3G21290 Arabidopsis thaliana HOM05D004845 ORTHO05D005957 3.3e-100 370.9 1165 34.0
Aa31LG8G7990 Aethionema arabicum HOM05D004845 ORTHO05D005957 5.0e-96 357.1 1151 32.2
Ah.01g016900 Amaranthus hybridus HOM05D004845 ORTHO05D005957 5.1e-93 347.1 1146 34.5
C05p42240 Brassica napus HOM05D004845 ORTHO05D005957 1.7e-88 332.0 1105 33.6
BcaC05g28184 Brassica carinata HOM05D004845 ORTHO05D005957 2.2e-88 331.6 1099 33.7
BolC5t32952H Brassica oleracea HOM05D004845 ORTHO05D005957 2.2e-88 331.6 1099 33.7
A05p27330 Brassica napus HOM05D004845 ORTHO05D005957 1.9e-87 328.6 1122 33.7
BraA05t21625Z Brassica rapa HOM05D004845 ORTHO05D005957 4.2e-87 327.4 1122 33.7
SGA_v2.0_scaffold45G16992 Striga asiatica HOM05D004845 ORTHO05D005957 4.2e-87 327.4 1130 31.5
BcaB06g26218 Brassica carinata HOM05D004845 ORTHO05D005957 2.7e-86 324.7 1145 32.3
CDE10G0876 Ceratophyllum demersum HOM05D004845 ORTHO05D005957 2.3e-85 321.6 412 48.8
Eucgr.J02886 Eucalyptus grandis HOM05D004845 ORTHO05D005957 1.7e-83 315.5 1010 35.5
Zm00001eb006560 Zea mays HOM05D004845 ORTHO05D005957 1.7e-80 305.4 1205 28.7
Lj5C49T6 Lonicera japonica HOM05D004845 ORTHO05D005957 2.2e-80 305.1 951 32.9
Zm00001eb401540 Zea mays HOM05D004845 ORTHO05D005957 1.4e-77 295.8 1223 28.7
Psat4g193760 Pisum sativum HOM05D004845 ORTHO05D005957 6.3e-75 287.0 1051 33.0
unitig_749.g14048 Utricularia gibba HOM05D004845 ORTHO05D005957 1.9e-71 275.4 871 36.9
Actinidia21743 Actinidia chinensis HOM05D004845 ORTHO05D005957 9.4e-71 273.1 281 60.5
SEGI_05846 Sequoiadendron giganteum HOM05D004845 ORTHO05D005957 2.7e-70 271.6 1267 26.7
Lalb_Chr15g0087461 Lupinus albus HOM05D004845 ORTHO05D005957 1.4e-69 269.2 1003 30.2
CSS0001379 Camellia sinensis var. sinensis HOM05D004845 ORTHO05D005957 1.8e-69 268.9 856 36.6
TPR.G8763 Trifolium pratense HOM05D004845 ORTHO05D005957 1.3e-67 262.7 1131 32.4
Duzib192G0218 Durio zibethinus HOM05D004845 ORTHO05D005957 3.4e-60 238.0 279 55.9
SEGI_07021 Sequoiadendron giganteum HOM05D004845 ORTHO05D005957 5.7e-60 237.3 1238 26.0
BcaC09g49066 Brassica carinata HOM05D004845 ORTHO05D005957 5.5e-55 220.7 1179 29.1
Actinidia21742 Actinidia chinensis HOM05D004845 ORTHO05D005957 6.1e-54 217.2 823 28.9
Haze_15920 Corylus avellana HOM05D004845 ORTHO05D005957 1.0e-48 199.9 371 38.3
CARHR097190 Cardamine hirsuta HOM05D004845 ORTHO05D005957 2.3e-48 198.7 1002 29.6
MBI01_g37799_MAGBIO Magnolia biondii HOM05D004845 ORTHO05D005957 3.8e-48 198.0 472 33.5
Medtr8g015610 Medicago truncatula HOM05D004845 ORTHO05D005957 8.6e-48 196.8 913 27.6
HPP92_028291 Vanilla planifolia HOM05D004845 ORTHO05D005957 1.5e-47 196.1 167 61.1
Lalb_Chr14g0372871 Lupinus albus HOM05D004845 ORTHO05D005957 9.5e-47 193.4 182 59.9
Atru.chr1.3631 Acer truncatum HOM05D001194 ORTHO05D005909 1.4e-42 179.5 307 38.1
Lalb_Chr14g0372881 Lupinus albus HOM05D004845 ORTHO05D005957 1.3e-40 172.9 945 31.1
Mapoly0021s0057 Marchantia polymorpha HOM05D004845 ORTHO05D005957 1.5e-39 169.5 416 33.7
Pp3c12_1570 Physcomitrium patens HOM05D004845 ORTHO05D005957 4.7e-38 164.5 396 35.1
AagrBONN_evm.TU.Sc2ySwM_344.5033 Anthoceros agrestis HOM05D004845 ORTHO05D005957 6.2e-38 164.1 383 34.2
SMO334G0114 Selaginella moellendorffii HOM05D004845 ORTHO05D005957 3.7e-35 154.8 380 33.7
C01p42960 Brassica napus HOM05D004845 ORTHO05D005957 1.5e-31 142.9 121 63.6
BolC1t04240H Brassica oleracea HOM05D004845 ORTHO05D005957 1.5e-31 142.9 137 59.9
CDE10G0326 Ceratophyllum demersum HOM05D004845 ORTHO05D005957 5.8e-28 131.0 417 27.6
Os03g0187100 Oryza sativa ssp. japonica HOM05D004845 ORTHO05D005957 5.8e-28 131.0 577 27.6
Haze_15921 Corylus avellana HOM05D004845 ORTHO05D005957 1.3e-27 129.8 219 42.0
HPP92_028293 Vanilla planifolia HOM05D004845 ORTHO05D005957 4.1e-26 124.8 194 37.6
SHI11164 Sapria himalayana HOM05D004845 ORTHO05D003034 1.5e-23 116.3 91 61.5
unitig_749.g14049 Utricularia gibba HOM05D004845 ORTHO05D005957 1.5e-23 116.3 100 57.0
C01p42950 Brassica napus HOM05D004845 ORTHO05D005957 4.0e-21 108.2 139 45.3
Ca_23298_v3 Cicer arietinum L. HOM05D004845 ORTHO05D005957 3.4e-20 105.1 108 50.0
Actinidia32135 Actinidia chinensis HOM05D004845 ORTHO05D005957 3.5e-17 95.1 87 59.8
CBR_g20996 Chara braunii HOM05D004845 ORTHO05D005957 8.7e-16 90.5 192 34.9
Ca_23296_v3 Cicer arietinum L. HOM05D004845 ORTHO05D005957 2.8e-14 85.5 260 28.8
PGSC0003DMG400002508 Solanum tuberosum HOM05D004845 ORTHO05D005957 3.4e-12 78.6 126 50.8
Zm00001eb424050 Zea mays HOM05D002942 ORTHO05D003270 7.6e-12 77.4 72 52.8
CBR_g20995 Chara braunii HOM05D004845 ORTHO05D005957 1.1e-10 73.6 113 35.4
Cpa.g.sc131.32 Carica papaya HOM05D004845 ORTHO05D005957 1.2e-09 70.1 92 52.2
Medtr1g021875 Medicago truncatula HOM05D004845 ORTHO05D005957 2.1e-09 69.3 70 55.7
HPP92_028292 Vanilla planifolia HOM05D004845 ORTHO05D005957 3.3e-07 62.0 244 48.0
BolC1t04238H Brassica oleracea HOM05D004845 ORTHO05D005957 2.1e-06 59.3 55 56.4
SHI11163 Sapria himalayana HOM05D004845 ORTHO05D005957 8.1e-06 57.4 95 44.2


User provided reference genes

Program Settings