Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_007606 Daucus carota HOM05D008135 ORTHO05D010260 4.5e-50 201.1 108 100.0
Dinv30405 Davidia involucrata HOM05D008135 ORTHO05D010260 2.1e-15 85.9 80 60.0
vmacro18825 Vaccinium macrocarpon HOM05D008135 ORTHO05D010260 6.1e-15 84.3 89 53.9
DCAR_026371 Daucus carota HOM05D008135 ORTHO05D010260 1.8e-14 82.8 80 57.5
Rhsim08G0230800 Rhododendron simsii HOM05D008135 ORTHO05D010260 5.2e-14 81.3 69 60.9
Actinidia32128 Actinidia chinensis HOM05D008135 ORTHO05D010260 2.6e-13 79.0 90 56.7
CSS0040576 Camellia sinensis var. sinensis HOM05D008135 ORTHO05D010260 2.6e-13 79.0 60 70.0
Peaxi162Scf00038g01219 Petunia axillaris HOM05D008135 ORTHO05D010260 4.4e-13 78.2 60 68.3
Nitab4.5_0006071g0080 Nicotiana tabacum HOM05D008135 ORTHO05D010260 7.4e-13 77.4 51 70.6
Solyc03g121340.1 Solanum lycopersicum HOM05D008135 ORTHO05D010260 1.7e-12 76.3 63 61.9
Oeu052813.1 Olea europaea HOM05D008135 ORTHO05D010260 2.8e-12 75.5 90 50.0
ECA232G1244 Erigeron canadensis HOM05D008135 ORTHO05D010260 4.8e-12 74.7 54 66.7
Sabra01G0135100 Salix brachista HOM05D008135 ORTHO05D010260 4.8e-12 74.7 69 62.3
Actinidia21739 Actinidia chinensis HOM05D008135 ORTHO05D010260 8.2e-12 73.9 85 51.8
Sopen03g040150 Solanum pennellii HOM05D008135 ORTHO05D010260 8.2e-12 73.9 63 60.3
Nitab4.5_0004848g0120 Nicotiana tabacum HOM05D008135 ORTHO05D010260 1.8e-11 72.8 58 60.3
Migut.I00998 Erythranthe guttata HOM05D008135 ORTHO05D010260 2.4e-11 72.4 45 75.6
Potri.001G194100 Populus trichocarpa HOM05D008135 ORTHO05D010260 4.1e-11 71.6 51 72.5
QL05p015762 Quercus lobata HOM05D008135 ORTHO05D010260 7.0e-11 70.9 59 61.0
MSTRG.11003 Avicennia marina HOM05D008135 ORTHO05D010260 1.2e-10 70.1 83 50.6
CiPaw.01G227600 Carya illinoinensis HOM05D008135 ORTHO05D010260 1.2e-10 70.1 70 57.1
QL05p015599 Quercus lobata HOM05D008135 ORTHO05D010260 1.2e-10 70.1 51 66.7
unitig_88.g27599 Utricularia gibba HOM05D008135 ORTHO05D010260 1.6e-10 69.7 54 61.1
QL05p015735 Quercus lobata HOM05D008135 ORTHO05D010260 3.5e-10 68.6 55 61.8
TAR624G1313 Trochodendron aralioides HOM05D008135 ORTHO05D010260 3.5e-10 68.6 62 59.7
Cfa003610 Carpinus fangiana HOM05D008135 ORTHO05D010260 5.9e-10 67.8 63 60.3
TAR383G0415 Trochodendron aralioides HOM05D008135 ORTHO05D010260 5.9e-10 67.8 76 50.0
RcHm_v2.0_Chr2g0142321 Rosa chinensis HOM05D008135 ORTHO05D010260 7.7e-10 67.4 51 66.7
Manes.04G137100 Manihot esculenta HOM05D008135 ORTHO05D010260 1.3e-09 66.6 70 54.3
Manes.11G029100 Manihot esculenta HOM05D008135 ORTHO05D010260 1.3e-09 66.6 49 69.4
Gohir.D05G135300 Gossypium hirsutum HOM05D008135 ORTHO05D010260 1.7e-09 66.2 63 57.1
Gorai.009G139100 Gossypium raimondii HOM05D008135 ORTHO05D010260 1.7e-09 66.2 63 57.1
Gohir.A05G133400 Gossypium hirsutum HOM05D008135 ORTHO05D010260 2.9e-09 65.5 70 51.4
Prupe.3G053100 Prunus persica HOM05D008135 ORTHO05D010260 5.0e-09 64.7 72 54.2
Cpa.g.sc131.24 Carica papaya HOM05D008135 ORTHO05D010260 3.2e-08 62.0 65 55.4
Eucgr.J02889 Eucalyptus grandis HOM05D008135 ORTHO05D010260 4.2e-08 61.6 53 58.5
Medtr8g015560 Medicago truncatula HOM05D008135 ORTHO05D010260 5.5e-08 61.2 63 55.6
FAN05G3342 Fragaria x ananassa HOM05D008135 ORTHO05D010260 7.2e-08 60.8 51 62.7
Gohir.D10G064050 Gossypium hirsutum HOM05D008135 ORTHO05D010260 7.2e-08 60.8 51 60.8
Gohir.A10G062350 Gossypium hirsutum HOM05D008135 ORTHO05D010260 9.4e-08 60.5 51 60.8
Psat4g194640 Pisum sativum HOM05D008135 ORTHO05D010260 9.4e-08 60.5 70 51.4
COL.COLO4_30598 Corchorus olitorius HOM05D008135 ORTHO05D010260 1.2e-07 60.1 56 55.4
Duzib235G1506 Durio zibethinus HOM05D008135 ORTHO05D010260 1.6e-07 59.7 64 56.2
FvH4_6g32890 Fragaria vesca HOM05D008135 ORTHO05D010260 1.6e-07 59.7 51 62.7
Glyma.07G012900 Glycine max HOM05D008135 ORTHO05D010260 1.6e-07 59.7 66 53.0
Phvul.010G142400 Phaseolus vulgaris HOM05D008135 ORTHO05D010260 2.1e-07 59.3 57 54.4
Gorai.011G068000 Gossypium raimondii HOM05D008135 ORTHO05D010260 2.7e-07 58.9 51 58.8
FAN02G1144 Fragaria x ananassa HOM05D008135 ORTHO05D010260 3.6e-07 58.5 51 60.8
Glyma.08G196600 Glycine max HOM05D008135 ORTHO05D010260 6.1e-07 57.8 66 48.5
Thecc.06G106900 Theobroma cacao HOM05D008135 ORTHO05D010260 8.0e-07 57.4 70 48.6
CsaV3_7G034940 Cucumis sativus L. HOM05D008135 ORTHO05D010260 1.8e-06 56.2 64 56.2
MELO3C024405.2 Cucumis melo HOM05D008135 ORTHO05D010260 3.0e-06 55.5 64 56.2
Lalb_Chr25g0280561 Lupinus albus HOM05D008135 ORTHO05D010260 6.7e-06 54.3 56 51.8


User provided reference genes

Program Settings