Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_007528 Daucus carota HOM05D006309 ORTHO05D007937 2.0e-61 238.8 112 100.0
Dinv24513 Davidia involucrata HOM05D006309 ORTHO05D007937 4.6e-42 174.5 112 77.7
vmacro01669 Vaccinium macrocarpon HOM05D006309 ORTHO05D007937 1.3e-41 172.9 111 74.8
CSS0019637 Camellia sinensis var. sinensis HOM05D006309 ORTHO05D007937 2.3e-41 172.2 112 77.7
CSS0033999 Camellia sinensis var. sinensis HOM05D006309 ORTHO05D007937 2.3e-41 172.2 112 77.7
MD12G1199900 Malus domestica HOM05D006309 ORTHO05D007937 3.0e-41 171.8 112 75.9
Ah.06g190700 Amaranthus hybridus HOM05D006309 ORTHO05D007937 5.1e-41 171.0 112 74.1
CiPaw.04G111200 Carya illinoinensis HOM05D006309 ORTHO05D007937 8.7e-41 170.2 112 75.9
QL03p010963 Quercus lobata HOM05D006309 ORTHO05D007937 8.7e-41 170.2 108 77.8
Solyc03g098120.3 Solanum lycopersicum HOM05D006309 ORTHO05D007937 1.1e-40 169.9 110 75.5
Sopen03g028820 Solanum pennellii HOM05D006309 ORTHO05D007937 1.1e-40 169.9 110 75.5
arahy.Tifrunner.gnm1.ann1.01IKZ7 Arachis hypogaea HOM05D006309 ORTHO05D007937 1.9e-40 169.1 130 68.5
Cc02_g35850 Coffea canephora HOM05D006309 ORTHO05D007937 1.9e-40 169.1 112 74.1
Migut.H01672 Erythranthe guttata HOM05D006309 ORTHO05D007937 2.5e-40 168.7 112 75.0
Hma1.2p1_0759F.1_g213920 Hydrangea macrophylla HOM05D006309 ORTHO05D007937 2.5e-40 168.7 108 78.7
Oeu061901.1 Olea europaea HOM05D006309 ORTHO05D007937 2.5e-40 168.7 112 74.1
Potri.005G002900 Populus trichocarpa HOM05D006309 ORTHO05D007937 2.5e-40 168.7 112 73.2
Rhsim11G0104500 Rhododendron simsii HOM05D006309 ORTHO05D007937 2.5e-40 168.7 112 73.2
Duzib205G1677 Durio zibethinus HOM05D006309 ORTHO05D007937 3.3e-40 168.3 112 75.9
Rhsim11G0105200 Rhododendron simsii HOM05D006309 ORTHO05D007937 3.3e-40 168.3 112 74.1
PGSC0003DMG400031051 Solanum tuberosum HOM05D006309 ORTHO05D007937 3.3e-40 168.3 110 74.5
AUR62000475 Chenopodium quinoa HOM05D006309 ORTHO05D007937 4.3e-40 167.9 112 73.2
GSVIVG01031328001 Vitis vinifera HOM05D006309 ORTHO05D007937 4.3e-40 167.9 112 74.1
CAN.G637.25 Capsicum annuum HOM05D006309 ORTHO05D007937 5.7e-40 167.5 110 73.6
Cpa.g.sc48.50 Carica papaya HOM05D006309 ORTHO05D007937 5.7e-40 167.5 112 75.0
Nitab4.5_0000936g0050 Nicotiana tabacum HOM05D006309 ORTHO05D007937 5.7e-40 167.5 110 74.5
arahy.Tifrunner.gnm1.ann1.P9U7KY Arachis hypogaea HOM05D006309 ORTHO05D007937 7.4e-40 167.2 112 73.2
arahy.Tifrunner.gnm1.ann1.RC3JIS Arachis hypogaea HOM05D006309 ORTHO05D007937 7.4e-40 167.2 112 73.2
arahy.Tifrunner.gnm1.ann1.VGN228 Arachis hypogaea HOM05D006309 ORTHO05D007937 7.4e-40 167.2 112 73.2
Lalb_Chr02g0147551 Lupinus albus HOM05D006309 ORTHO05D007937 7.4e-40 167.2 112 71.4
Hund05518 Selenicereus undatus HOM05D006309 ORTHO05D007937 7.4e-40 167.2 112 73.2
vmacro16416 Vaccinium macrocarpon HOM05D006309 ORTHO05D007937 7.4e-40 167.2 112 73.2
Lalb_Chr21g0310061 Lupinus albus HOM05D006309 ORTHO05D007937 9.7e-40 166.8 112 71.4
Manes.09G181100 Manihot esculenta HOM05D006309 ORTHO05D007937 9.7e-40 166.8 108 75.9
CiPaw.07G036200 Carya illinoinensis HOM05D006309 ORTHO05D007937 1.3e-39 166.4 112 73.2
Peaxi162Scf00171g00731 Petunia axillaris HOM05D006309 ORTHO05D007937 1.3e-39 166.4 110 73.6
Sabra13G0001700 Salix brachista HOM05D006309 ORTHO05D007937 1.3e-39 166.4 115 70.4
Nitab4.5_0004454g0020 Nicotiana tabacum HOM05D006309 ORTHO05D007937 1.7e-39 166.0 110 73.6
Ca_10200_v3 Cicer arietinum L. HOM05D006309 ORTHO05D007937 2.8e-39 165.2 112 71.4
Psat6g155680 Pisum sativum HOM05D006309 ORTHO05D007937 2.8e-39 165.2 111 72.1
Ciclev10013195m.g Citrus clementina HOM05D006309 ORTHO05D007937 3.7e-39 164.9 112 74.1
Medtr1g484930 Medicago truncatula HOM05D006309 ORTHO05D007937 3.7e-39 164.9 112 70.5
Sed0021183 Sechium edule HOM05D006309 ORTHO05D007937 3.7e-39 164.9 111 71.2
ClCG02G014650 Citrullus lanatus HOM05D006309 ORTHO05D007937 4.8e-39 164.5 111 71.2
Gohir.D08G174300 Gossypium hirsutum HOM05D006309 ORTHO05D007937 4.8e-39 164.5 111 73.9
Gorai.004G182000 Gossypium raimondii HOM05D006309 ORTHO05D007937 4.8e-39 164.5 111 73.9
RcHm_v2.0_Chr3g0458531 Rosa chinensis HOM05D006309 ORTHO05D007937 4.8e-39 164.5 112 72.3
CDE09G0003 Ceratophyllum demersum HOM05D006309 ORTHO05D007937 6.3e-39 164.1 108 73.1
Haze_03988 Corylus avellana HOM05D006309 ORTHO05D007937 6.3e-39 164.1 112 73.2
Phvul.007G205000 Phaseolus vulgaris HOM05D006309 ORTHO05D007937 6.3e-39 164.1 112 72.3
Sabra05G0000300 Salix brachista HOM05D006309 ORTHO05D007937 6.3e-39 164.1 140 60.0
Sabra05G0014400 Salix brachista HOM05D006309 ORTHO05D007937 6.3e-39 164.1 140 60.0
VMungo0720G0633 Vigna mungo HOM05D006309 ORTHO05D007937 6.3e-39 164.1 111 72.1
Gohir.A08G153400 Gossypium hirsutum HOM05D006309 ORTHO05D007937 1.1e-38 163.3 111 73.9
Nn7g36656 Nelumbo nucifera HOM05D006309 ORTHO05D007937 1.1e-38 163.3 112 73.2
FvH4_6g08490 Fragaria vesca HOM05D006309 ORTHO05D007937 1.4e-38 162.9 112 71.4
FAN02G0285 Fragaria x ananassa HOM05D006309 ORTHO05D007937 1.4e-38 162.9 112 71.4
FAN05G1622 Fragaria x ananassa HOM05D006309 ORTHO05D007937 1.4e-38 162.9 112 71.4
FAN09G1610 Fragaria x ananassa HOM05D006309 ORTHO05D007937 1.4e-38 162.9 112 71.4
FAN14G3239 Fragaria x ananassa HOM05D006309 ORTHO05D007937 1.4e-38 162.9 112 71.4
Prupe.6G304700 Prunus persica HOM05D006309 ORTHO05D007937 1.4e-38 162.9 108 74.1
SalBow4G0401 Salvia bowleyana HOM05D006309 ORTHO05D007937 1.4e-38 162.9 122 67.2
SalBow4G1963 Salvia bowleyana HOM05D006309 ORTHO05D007937 1.4e-38 162.9 122 67.2
SalBow4G2407 Salvia bowleyana HOM05D006309 ORTHO05D007937 1.4e-38 162.9 122 67.2
Thecc.03G310900 Theobroma cacao HOM05D006309 ORTHO05D007937 1.4e-38 162.9 112 73.2
Actinidia22855 Actinidia chinensis HOM05D006309 ORTHO05D007937 1.8e-38 162.5 111 72.1
PGR083G2709 Punica granatum HOM05D006309 ORTHO05D007937 1.8e-38 162.5 111 71.2
Atru.chr12.1543 Acer truncatum HOM05D006309 ORTHO05D007937 5.3e-38 161.0 108 74.1
AUR62017099 Chenopodium quinoa HOM05D006309 ORTHO05D007937 6.9e-38 160.6 112 70.5
TPR.G2591 Trifolium pratense HOM05D006309 ORTHO05D007937 6.9e-38 160.6 112 67.9
Lj5g0003279 Lotus japonicus HOM05D006309 ORTHO05D007937 9.1e-38 160.2 112 70.5
SalBow5G3054 Salvia bowleyana HOM05D006309 ORTHO05D007937 9.1e-38 160.2 112 70.5
EL10Ac4g09558 Beta vulgaris HOM05D006309 ORTHO05D007937 2.0e-37 159.1 108 72.2
TAR636G2194 Trochodendron aralioides HOM05D006309 ORTHO05D007937 2.0e-37 159.1 108 72.2
Glyma.20G090800 Glycine max HOM05D006309 ORTHO05D007937 2.6e-37 158.7 112 69.6
Glyma.20G092200 Glycine max HOM05D006309 ORTHO05D007937 2.6e-37 158.7 112 69.6
unitig_62.g23615 Utricularia gibba HOM05D006309 ORTHO05D007937 2.6e-37 158.7 112 70.5
MELO3C004152.2 Cucumis melo HOM05D006309 ORTHO05D007937 4.5e-37 157.9 111 69.4
Sc16g0009400 Simmondsia chinensis HOM05D006309 ORTHO05D007937 4.5e-37 157.9 108 70.4
FvH4_2g19190 Fragaria vesca HOM05D006309 ORTHO05D007937 5.9e-37 157.5 112 69.6
FAN24G3038 Fragaria x ananassa HOM05D006309 ORTHO05D007937 5.9e-37 157.5 112 69.6
TWI36G0052 Tripterygium wilfordii HOM05D006309 ORTHO05D007937 5.9e-37 157.5 112 70.5
AL1G67090 Arabidopsis lyrata HOM05D006309 ORTHO05D007937 7.7e-37 157.1 108 71.3
Carub.0002s0712 Capsella rubella HOM05D006309 ORTHO05D007937 7.7e-37 157.1 108 71.3
CARHR288700 Cardamine hirsuta HOM05D006309 ORTHO05D007937 7.7e-37 157.1 111 69.4
Sc09g0002420 Simmondsia chinensis HOM05D006309 ORTHO05D007937 1.3e-36 156.4 112 67.0
AT1G57540 Arabidopsis thaliana HOM05D006309 ORTHO05D007937 1.7e-36 156.0 111 68.5
BcaB07g31141 Brassica carinata HOM05D006309 ORTHO05D007937 1.7e-36 156.0 111 68.5
BcaC04g22081 Brassica carinata HOM05D006309 ORTHO05D007937 1.7e-36 156.0 111 68.5
C09p23680 Brassica napus HOM05D006309 ORTHO05D007937 1.7e-36 156.0 111 68.5
BraA09t37510Z Brassica rapa HOM05D006309 ORTHO05D007937 1.7e-36 156.0 111 68.5
CsaV3_2G007320 Cucumis sativus L. HOM05D006309 ORTHO05D007937 1.7e-36 156.0 111 67.6
ECA233G1704 Erigeron canadensis HOM05D006309 ORTHO05D007937 1.7e-36 156.0 112 67.9
Sp1g28800 Schrenkiella parvula HOM05D006309 ORTHO05D007937 1.7e-36 156.0 111 68.5
Lsat_1_v5_gn_1_112940 Lactuca sativa HOM05D006309 ORTHO05D007937 2.2e-36 155.6 111 67.6
Aqoxy2G02488 Aquilegia oxysepala HOM05D006309 ORTHO05D007937 2.9e-36 155.2 111 64.9
Sp2g05970 Schrenkiella parvula HOM05D006309 ORTHO05D007937 2.9e-36 155.2 111 67.6
BolC9t55290H Brassica oleracea HOM05D006309 ORTHO05D007937 3.8e-36 154.8 111 67.6
THA.LOC104820476 Tarenaya hassleriana HOM05D006309 ORTHO05D007937 3.8e-36 154.8 108 68.5
A09p18900 Brassica napus HOM05D006309 ORTHO05D007937 5.0e-36 154.5 111 68.5
Aa31LG2G11310 Aethionema arabicum HOM05D006309 ORTHO05D007937 6.5e-36 154.1 111 68.5
ATR0796G010 Amborella trichopoda HOM05D006309 ORTHO05D007937 1.1e-35 153.3 110 69.1
FAN15G2822 Fragaria x ananassa HOM05D006309 ORTHO05D007937 1.1e-35 153.3 112 67.9
Thhalv10010969m.g Eutrema salsugineum HOM05D006309 ORTHO05D007937 1.4e-35 152.9 111 68.5
Os01g0250600 Oryza sativa ssp. japonica HOM05D006309 ORTHO05D007937 1.9e-35 152.5 108 67.6
CANSAT54G2801 Cannabis sativa HOM05D006309 ORTHO05D007937 2.5e-35 152.1 112 68.8
Lj4g0016187 Lotus japonicus HOM05D006309 ORTHO05D007937 3.6e-34 148.3 112 66.1
HanXRQChr08g0212181 Helianthus annuus HOM05D006309 ORTHO05D007937 4.7e-34 147.9 107 65.4
Prupe.8G045300 Prunus persica HOM05D006309 ORTHO05D007937 4.4e-32 141.4 108 65.7
Cfa012394 Carpinus fangiana HOM05D006309 ORTHO05D007937 9.7e-32 140.2 99 69.7
PSO210G0390 Papaver somniferum HOM05D006309 ORTHO05D007937 2.8e-31 138.7 108 63.9
PSO761G0726 Papaver somniferum HOM05D006309 ORTHO05D007937 2.8e-31 138.7 108 63.9
EL10Ac4g07573 Beta vulgaris HOM05D006309 ORTHO05D007937 3.7e-31 138.3 112 63.4
Dinv30948 Davidia involucrata HOM05D006309 ORTHO05D007937 3.8e-28 128.3 88 73.9
MBI18_g10373_MAGBIO Magnolia biondii HOM05D006309 ORTHO05D007937 4.2e-27 124.8 112 60.7
DCAR_029292 Daucus carota HOM05D002465 ORTHO05D005308 1.1e-19 100.1 49 91.8
Mapoly0075s0044 Marchantia polymorpha HOM05D006309 ORTHO05D007937 4.2e-19 98.2 110 42.7
HanXRQChr06g0180851 Helianthus annuus HOM05D006309 ORTHO05D007937 2.1e-18 95.9 52 78.8
HanXRQChr16g0506271 Helianthus annuus HOM05D006309 ORTHO05D007937 2.1e-18 95.9 52 78.8
Pp3c8_1240 Physcomitrium patens HOM05D006309 ORTHO05D007937 2.7e-18 95.5 110 43.6
COL.COLO4_16932 Corchorus olitorius HOM05D006309 ORTHO05D007937 2.2e-15 85.9 47 87.2
Zm00001eb239560 Zea mays HOM05D006309 ORTHO05D007937 2.8e-15 85.5 50 74.0
Glyma.09G093300 Glycine max HOM05D006309 ORTHO05D000504 1.8e-14 82.8 54 66.7
MBI06_g06498_MAGBIO Magnolia biondii HOM05D006309 ORTHO05D007937 3.1e-14 82.0 47 83.0
Potri.013G002301 Populus trichocarpa HOM05D006309 ORTHO05D007937 1.8e-09 66.2 41 75.6
BNapus_Darmor_BZH_scaffold_223p00020 Brassica napus HOM05D006309 ORTHO05D007937 5.7e-08 61.2 39 69.2


User provided reference genes

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