Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_007451 Daucus carota HOM05D007670 ORTHO05D009646 0.0e+00 1158.7 636 100.0
TWI39G0169 Tripterygium wilfordii HOM05D007670 ORTHO05D009646 1.6e-147 527.3 672 49.7
Thecc.03G116000 Theobroma cacao HOM05D007670 ORTHO05D009646 7.4e-145 518.5 657 51.3
Cc04_g11380 Coffea canephora HOM05D007670 ORTHO05D009646 3.8e-141 506.1 701 48.4
PGR044G2723 Punica granatum HOM05D007670 ORTHO05D009646 1.6e-139 500.7 668 49.4
Lsat_1_v5_gn_5_13921 Lactuca sativa HOM05D007670 ORTHO05D009646 2.7e-139 500.0 631 54.0
TWI23G1319 Tripterygium wilfordii HOM05D007670 ORTHO05D009646 5.2e-138 495.7 706 48.0
Actinidia08035 Actinidia chinensis HOM05D007670 ORTHO05D009646 6.7e-138 495.4 678 48.2
Potri.015G084300 Populus trichocarpa HOM05D007670 ORTHO05D009646 8.8e-138 495.0 651 48.5
Gohir.A03G074800 Gossypium hirsutum HOM05D007670 ORTHO05D009646 4.1e-135 486.1 664 46.5
FAN18G1020 Fragaria x ananassa HOM05D007670 ORTHO05D009646 7.7e-134 481.9 662 48.5
Ciclev10024352m.g Citrus clementina HOM05D007670 ORTHO05D009646 1.2e-131 474.6 668 46.4
COL.COLO4_33501 Corchorus olitorius HOM05D007670 ORTHO05D009646 1.0e-130 471.5 678 46.8
Atru.chr9.2593 Acer truncatum HOM05D007670 ORTHO05D009646 1.4e-130 471.1 687 46.4
Migut.O00167 Erythranthe guttata HOM05D007670 ORTHO05D009646 3.0e-130 469.9 620 49.5
ECA246G3610 Erigeron canadensis HOM05D007670 ORTHO05D009646 5.2e-130 469.2 698 48.9
FvH4_5g06391 Fragaria vesca HOM05D007670 ORTHO05D009646 2.0e-129 467.2 662 47.6
FAN04G2873 Fragaria x ananassa HOM05D007670 ORTHO05D009646 3.4e-129 466.5 662 48.2
FAN13G0035 Fragaria x ananassa HOM05D007670 ORTHO05D009646 3.4e-129 466.5 658 47.4
FAN08G1903 Fragaria x ananassa HOM05D007670 ORTHO05D009646 1.7e-128 464.2 662 47.4
Sopen03g031210 Solanum pennellii HOM05D007670 ORTHO05D009646 1.7e-128 464.2 686 48.3
Prupe.5G164600 Prunus persica HOM05D007670 ORTHO05D009646 4.8e-128 462.6 595 49.6
Manes.06G111300 Manihot esculenta HOM05D007670 ORTHO05D009646 8.3e-128 461.8 553 49.4
PGSC0003DMG400018192 Solanum tuberosum HOM05D007670 ORTHO05D009646 2.4e-127 460.3 684 47.4
Glyma.05G042100 Glycine max HOM05D007670 ORTHO05D009646 5.4e-127 459.1 658 45.7
Lj5C130G15 Lonicera japonica HOM05D007670 ORTHO05D009646 1.6e-126 457.6 614 49.2
Cfa019228 Carpinus fangiana HOM05D007670 ORTHO05D009646 4.5e-126 456.1 669 46.3
Lj4g0014046 Lotus japonicus HOM05D007670 ORTHO05D009646 4.5e-126 456.1 650 46.6
Aqoxy3G01244 Aquilegia oxysepala HOM05D007670 ORTHO05D009646 1.3e-125 454.5 665 46.0
SalBow5G0325 Salvia bowleyana HOM05D007670 ORTHO05D009646 1.5e-124 451.1 693 44.6
SalBow5G5044 Salvia bowleyana HOM05D007670 ORTHO05D009646 4.2e-124 449.5 693 44.4
Nitab4.5_0008913g0020 Nicotiana tabacum HOM05D007670 ORTHO05D009646 9.5e-124 448.4 685 46.7
Gorai.003G106900 Gossypium raimondii HOM05D007670 ORTHO05D009646 1.8e-122 444.1 586 47.8
Nitab4.5_0002522g0060 Nicotiana tabacum HOM05D007670 ORTHO05D009646 2.3e-122 443.7 699 47.1
Gohir.D03G101500 Gossypium hirsutum HOM05D007670 ORTHO05D009646 2.6e-121 440.3 586 47.6
RcHm_v2.0_Chr7g0192411 Rosa chinensis HOM05D007670 ORTHO05D009646 2.6e-121 440.3 579 50.4
VMungo1215G0346 Vigna mungo HOM05D007670 ORTHO05D009646 4.4e-121 439.5 643 45.3
Psat4g061560 Pisum sativum HOM05D007670 ORTHO05D009646 6.3e-120 435.6 656 45.0
Ca_19420_v3 Cicer arietinum L. HOM05D007670 ORTHO05D009646 4.5e-118 429.5 616 45.6
MD14G1170500 Malus domestica HOM05D007670 ORTHO05D009646 1.7e-117 427.6 602 46.2
TPR.G37476 Trifolium pratense HOM05D007670 ORTHO05D009646 2.3e-117 427.2 702 42.5
ClCG03G003050 Citrullus lanatus HOM05D007670 ORTHO05D009646 2.9e-117 426.8 637 44.6
arahy.Tifrunner.gnm1.ann1.4HF9FM Arachis hypogaea HOM05D007670 ORTHO05D009646 5.0e-117 426.0 687 42.8
Medtr4g104750 Medicago truncatula HOM05D007670 ORTHO05D009646 2.5e-116 423.7 622 45.2
arahy.Tifrunner.gnm1.ann1.2S9CTF Arachis hypogaea HOM05D007670 ORTHO05D009646 4.7e-115 419.5 638 43.9
Phvul.003G205800 Phaseolus vulgaris HOM05D007670 ORTHO05D009646 4.7e-115 419.5 651 44.5
CANSAT80G0945 Cannabis sativa HOM05D007670 ORTHO05D009646 1.7e-112 411.0 672 42.7
Sed0003800 Sechium edule HOM05D007670 ORTHO05D009646 1.8e-111 407.5 634 43.5
Hma1.2p1_1092F.1_g255930 Hydrangea macrophylla HOM05D007670 ORTHO05D009646 2.3e-109 400.6 464 53.9
HanXRQChr05g0156201 Helianthus annuus HOM05D007670 ORTHO05D009646 1.9e-103 380.9 552 49.3
GSVIVG01007632001 Vitis vinifera HOM05D007670 ORTHO05D009646 1.9e-103 380.9 451 51.7
PSO478G3950 Papaver somniferum HOM05D007670 ORTHO05D009646 2.4e-103 380.6 680 40.1
ATR0824G010 Amborella trichopoda HOM05D007670 ORTHO05D009646 2.8e-99 367.1 620 41.9
Eucgr.K02784 Eucalyptus grandis HOM05D007670 ORTHO05D009646 2.0e-97 360.9 455 50.1
TAR629G1516 Trochodendron aralioides HOM05D007670 ORTHO05D009646 2.7e-94 350.5 301 64.5
Dinv20593 Davidia involucrata HOM05D007670 ORTHO05D009646 8.9e-90 335.5 491 46.8
CiPaw.12G031800 Carya illinoinensis HOM05D007670 ORTHO05D009646 2.4e-87 327.4 578 42.4
Peaxi162Scf00089g01230 Petunia axillaris HOM05D007670 ORTHO05D009646 3.6e-75 287.0 272 59.2
Solyc03g112120.3 Solanum lycopersicum HOM05D007670 ORTHO05D009646 2.4e-71 274.2 275 55.6
QL10p006759 Quercus lobata HOM05D007670 ORTHO05D009646 9.3e-71 272.3 459 42.0
MELO3C002304.2 Cucumis melo HOM05D007670 ORTHO05D009646 1.2e-70 271.9 309 52.1
Glyma.17G124800 Glycine max HOM05D007670 ORTHO05D009646 3.5e-70 270.4 434 42.2
HPP92_003438 Vanilla planifolia HOM05D001493 ORTHO05D001681 1.6e-67 261.5 495 38.6
Actinidia24601 Actinidia chinensis HOM05D007670 ORTHO05D009646 3.8e-64 250.4 233 57.9
Zm00001eb388830 Zea mays HOM05D007670 ORTHO05D009646 2.4e-63 247.7 622 34.7
Cpa.g.sc159.12 Carica papaya HOM05D007670 ORTHO05D009646 3.3e-60 237.3 467 38.5
HPP92_001311 Vanilla planifolia HOM05D007670 ORTHO05D009646 5.6e-60 236.5 613 31.8
SEGI_28887 Sequoiadendron giganteum HOM05D007670 ORTHO05D009646 2.0e-49 201.4 229 48.0
Glyma.17G124700 Glycine max HOM05D007670 ORTHO05D009646 5.1e-45 186.8 215 51.2
Peaxi162Scf00089g01229 Petunia axillaris HOM05D007670 ORTHO05D009646 1.1e-44 185.7 412 39.3
Solyc03g112110.1 Solanum lycopersicum HOM05D007670 ORTHO05D009646 3.7e-43 180.6 404 40.8
Os01g0909300 Oryza sativa ssp. japonica HOM05D007670 ORTHO05D009646 5.1e-37 160.2 164 53.0
Zm00001eb143920 Zea mays HOM05D007670 ORTHO05D009646 2.6e-36 157.9 378 33.6
TAR629G0999 Trochodendron aralioides HOM05D007670 ORTHO05D009646 7.7e-33 146.4 206 47.6
Zm00001eb393770 Zea mays HOM05D007670 ORTHO05D009646 1.3e-32 145.6 239 40.6
Pp3c11_2120 Physcomitrium patens HOM05D007670 ORTHO05D009646 5.5e-31 140.2 226 36.7
Sabra15G0107400 Salix brachista HOM05D007670 ORTHO05D009646 2.0e-28 131.7 473 30.2
Pp3c21_7410 Physcomitrium patens HOM05D007670 ORTHO05D009646 2.0e-25 121.7 250 31.2
Pp3c26_6480 Physcomitrium patens HOM05D007670 ORTHO05D009646 3.5e-25 120.9 303 27.1
Pp3c26_6484 Physcomitrium patens HOM05D007670 ORTHO05D009646 3.5e-25 120.9 303 27.1
QL10p006748 Quercus lobata HOM05D007670 ORTHO05D009646 1.1e-23 115.9 149 52.3
Pp3c10_12340 Physcomitrium patens HOM05D007670 ORTHO05D009646 1.9e-23 115.2 242 31.0
Pp3c18_13530 Physcomitrium patens HOM05D007670 ORTHO05D009646 2.1e-22 111.7 279 30.1
Mapoly0020s0028 Marchantia polymorpha HOM05D007670 ORTHO05D009646 2.0e-20 105.1 190 37.9
Pp3c7_23860 Physcomitrium patens HOM05D007670 ORTHO05D009646 3.3e-20 104.4 288 28.8
CsaV3_1G008900 Cucumis sativus L. HOM05D007670 ORTHO05D009646 6.3e-19 100.1 122 49.2
SEGI_38678 Sequoiadendron giganteum HOM05D007670 ORTHO05D009646 1.0e-16 92.8 421 28.0
SMO118G0556 Selaginella moellendorffii HOM05D007837 ORTHO05D009965 1.4e-13 82.4 225 28.4
Aqoxy3G00774 Aquilegia oxysepala HOM05D007670 ORTHO05D009646 6.8e-13 80.1 129 38.0
AagrBONN_evm.TU.Sc2ySwM_228.3840 Anthoceros agrestis HOM05D007837 ORTHO05D009965 8.3e-11 73.2 235 27.2
Migut.M01930 Erythranthe guttata HOM05D007837 ORTHO05D009965 5.4e-10 70.5 249 26.1
Gohir.D05G113500 Gossypium hirsutum HOM05D007837 ORTHO05D009965 2.7e-09 68.2 241 26.6
MELO3C031542.2 Cucumis melo HOM05D007670 ORTHO05D009646 5.9e-09 67.0 107 45.8
Dinv06743 Davidia involucrata HOM05D007837 ORTHO05D009965 7.7e-09 66.6 350 24.3
Gorai.009G117500 Gossypium raimondii HOM05D007837 ORTHO05D009965 7.7e-09 66.6 241 26.1
Lj3g0012849 Lotus japonicus HOM05D007837 ORTHO05D009965 1.3e-08 65.9 270 23.0
Oeu008970.1 Olea europaea HOM05D007837 ORTHO05D009965 1.3e-08 65.9 258 25.6
Psat7g145400 Pisum sativum HOM05D007837 ORTHO05D009965 2.3e-08 65.1 241 24.1
TWI15G0587 Tripterygium wilfordii HOM05D007837 ORTHO05D009965 3.8e-08 64.3 276 23.9
Actinidia33640 Actinidia chinensis HOM05D007837 ORTHO05D009965 5.0e-08 63.9 277 25.3
Gohir.A05G113000 Gossypium hirsutum HOM05D007837 ORTHO05D009965 5.0e-08 63.9 241 25.7
PSO675G4978 Papaver somniferum HOM05D007837 ORTHO05D009965 1.1e-07 62.8 278 23.4
VMungo1127G0844 Vigna mungo HOM05D007837 ORTHO05D009965 1.1e-07 62.8 239 24.3
Solyc02g069550.1 Solanum lycopersicum HOM05D007837 ORTHO05D009965 1.5e-07 62.4 240 24.6
Sopen02g018680 Solanum pennellii HOM05D007837 ORTHO05D009965 1.5e-07 62.4 240 24.6
PSO541G2349 Papaver somniferum HOM05D007837 ORTHO05D009965 2.5e-07 61.6 278 23.4
Duzib160G0902 Durio zibethinus HOM05D007837 ORTHO05D009965 4.2e-07 60.8 241 25.3
Glyma.12G002600 Glycine max HOM05D007837 ORTHO05D009965 5.5e-07 60.5 326 23.6
Thecc.06G015600 Theobroma cacao HOM05D007837 ORTHO05D009965 5.5e-07 60.5 241 24.9
Atru.chr10.652 Acer truncatum HOM05D007837 ORTHO05D009965 7.2e-07 60.1 277 23.5
CSS0012057 Camellia sinensis var. sinensis HOM05D007837 ORTHO05D009965 7.2e-07 60.1 280 25.0
Phvul.011G003300 Phaseolus vulgaris HOM05D007837 ORTHO05D009965 7.2e-07 60.1 226 24.3
Cpa.g.sc192.12 Carica papaya HOM05D007837 ORTHO05D009965 9.5e-07 59.7 245 24.5
Manes.16G061400 Manihot esculenta HOM05D007837 ORTHO05D009965 1.6e-06 58.9 282 24.8
PGR042G0413 Punica granatum HOM05D007837 ORTHO05D009965 1.6e-06 58.9 263 25.9
Ciclev10017939m.g Citrus clementina HOM05D007837 ORTHO05D009965 2.8e-06 58.2 263 23.6
Peaxi162Scf00195g00413 Petunia axillaris HOM05D007837 ORTHO05D009965 3.6e-06 57.8 240 24.2
SEGI_16109 Sequoiadendron giganteum HOM05D007837 ORTHO05D009965 3.6e-06 57.8 187 25.1
DCAR_001340 Daucus carota HOM05D007837 ORTHO05D009965 6.1e-06 57.0 202 23.8
Lsat_1_v5_gn_1_90680 Lactuca sativa HOM05D007837 ORTHO05D001664 6.1e-06 57.0 287 21.3
Prupe.4G103700 Prunus persica HOM05D007837 ORTHO05D009965 8.0e-06 56.6 353 23.2


User provided reference genes

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