Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_007397 Daucus carota HOM05D000751 ORTHO05D005618 0.0e+00 1437.2 753 100.0
CSS0048015 Camellia sinensis var. sinensis HOM05D000751 ORTHO05D005618 6.3e-252 874.4 760 63.3
Actinidia06357 Actinidia chinensis HOM05D000751 ORTHO05D005618 8.5e-249 864.0 756 63.9
GSVIVG01010908001 Vitis vinifera HOM05D000751 ORTHO05D005618 1.2e-239 833.6 758 60.4
Hma1.2p1_0207F.1_g087810 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 2.8e-239 832.4 760 60.8
TAR636G3589 Trochodendron aralioides HOM05D000751 ORTHO05D005618 4.4e-237 825.1 772 60.2
Lsat_1_v5_gn_7_56501 Lactuca sativa HOM05D000751 ORTHO05D005618 4.4e-229 798.5 754 59.4
Aqoxy2G02196 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 6.4e-228 794.7 764 58.0
Ciclev10030781m.g Citrus clementina HOM05D000751 ORTHO05D005618 1.5e-224 783.5 697 60.5
ECA240G3678 Erigeron canadensis HOM05D000751 ORTHO05D005618 2.5e-224 782.7 759 58.2
Nitab4.5_0008918g0010 Nicotiana tabacum HOM05D000751 ORTHO05D005618 3.3e-224 782.3 741 58.6
Nitab4.5_0000074g0030 Nicotiana tabacum HOM05D000751 ORTHO05D005618 1.5e-221 773.5 762 57.0
Cc06_g22130 Coffea canephora HOM05D000751 ORTHO05D005618 2.9e-220 769.2 678 60.9
Nn8g40996 Nelumbo nucifera HOM05D000751 ORTHO05D005618 6.4e-220 768.1 698 61.7
MELO3C017440.2 Cucumis melo HOM05D000751 ORTHO05D005618 2.1e-218 763.1 602 64.8
CsaV3_1G031770 Cucumis sativus L. HOM05D000751 ORTHO05D005618 1.3e-217 760.4 692 62.4
Eucgr.A01411 Eucalyptus grandis HOM05D000751 ORTHO05D005618 3.0e-217 759.2 758 55.8
Prupe.1G079600 Prunus persica HOM05D000751 ORTHO05D005618 6.6e-217 758.1 758 58.2
MSTRG.26530 Avicennia marina HOM05D000751 ORTHO05D005618 1.5e-216 756.9 739 57.2
MBI16_g18209_MAGBIO Magnolia biondii HOM05D000751 ORTHO05D000889 1.6e-215 753.4 683 61.6
TWI38G2172 Tripterygium wilfordii HOM05D000751 ORTHO05D005618 1.1e-214 750.7 764 58.0
Cpa.g.sc86.27 Carica papaya HOM05D000751 ORTHO05D005618 2.3e-214 749.6 620 62.4
Sed0012322 Sechium edule HOM05D000751 ORTHO05D005618 2.3e-214 749.6 687 61.3
Cfa016755 Carpinus fangiana HOM05D000751 ORTHO05D005618 2.6e-213 746.1 704 58.5
Peaxi162Scf00324g00731 Petunia axillaris HOM05D000751 ORTHO05D005618 2.6e-213 746.1 745 56.4
PSO478G0715 Papaver somniferum HOM05D000751 ORTHO05D005618 7.6e-213 744.6 744 57.1
Manes.17G002500 Manihot esculenta HOM05D000751 ORTHO05D005618 2.2e-212 743.0 687 59.1
CiPaw.14G110300 Carya illinoinensis HOM05D000751 ORTHO05D005618 2.4e-211 739.6 737 56.6
Duzib168G1036 Durio zibethinus HOM05D000751 ORTHO05D005618 4.1e-211 738.8 756 55.2
EL10As14g24084 Beta vulgaris HOM05D000751 ORTHO05D005618 5.4e-211 738.4 753 53.1
CANSAT11G2085 Cannabis sativa HOM05D000751 ORTHO05D005618 1.1e-208 730.7 734 57.8
Gohir.D05G003900 Gossypium hirsutum HOM05D000751 ORTHO05D005618 2.5e-208 729.6 581 63.5
Gorai.009G003500 Gossypium raimondii HOM05D000751 ORTHO05D005618 2.5e-208 729.6 583 63.3
EL10Ac2g02594 Beta vulgaris HOM05D000751 ORTHO05D005618 9.6e-208 727.6 756 52.4
Atru.chr11.2504 Acer truncatum HOM05D000751 ORTHO05D005618 3.6e-207 725.7 745 58.1
PSO017G1776 Papaver somniferum HOM05D000751 ORTHO05D005618 8.1e-207 724.5 744 56.2
Migut.L01901 Erythranthe guttata HOM05D000751 ORTHO05D005618 1.4e-206 723.8 567 62.3
Hund24686 Selenicereus undatus HOM05D000751 ORTHO05D005618 8.9e-206 721.1 790 51.3
THA.LOC104813512 Tarenaya hassleriana HOM05D000751 ORTHO05D005618 2.0e-205 719.9 723 56.6
Thecc.09G180200 Theobroma cacao HOM05D000751 ORTHO05D005618 5.8e-205 718.4 751 54.2
Gohir.A05G003500 Gossypium hirsutum HOM05D000751 ORTHO05D005618 7.6e-205 718.0 583 62.1
Potri.003G010000 Populus trichocarpa HOM05D000751 ORTHO05D005618 1.7e-204 716.8 620 60.2
RcHm_v2.0_Chr4g0400251 Rosa chinensis HOM05D000751 ORTHO05D005618 1.4e-203 713.8 574 62.5
Sc06g0007900 Simmondsia chinensis HOM05D000751 ORTHO05D005618 1.2e-202 710.7 522 68.2
HanXRQChr03g0068331 Helianthus annuus HOM05D000751 ORTHO05D005618 3.5e-202 709.1 723 57.5
FvH4_4g07640 Fragaria vesca HOM05D000751 ORTHO05D005618 1.3e-201 707.2 574 61.8
Aa31LG7G2520 Aethionema arabicum HOM05D000751 ORTHO05D005618 3.0e-201 706.1 712 54.2
Thhalv10006892m.g Eutrema salsugineum HOM05D000751 ORTHO05D005618 3.9e-201 705.7 743 54.0
Carub.0001s1742 Capsella rubella HOM05D000751 ORTHO05D005618 5.1e-201 705.3 742 55.7
VMungo1309G0231 Vigna mungo HOM05D000751 ORTHO05D005618 8.7e-201 704.5 586 61.6
AT1G17690 Arabidopsis thaliana HOM05D000751 ORTHO05D005618 1.1e-200 704.1 744 55.5
Sp4g05240 Schrenkiella parvula HOM05D000751 ORTHO05D005618 3.3e-200 702.6 570 61.8
A08p30790 Brassica napus HOM05D000751 ORTHO05D005618 5.6e-200 701.8 744 52.6
AL1G30040 Arabidopsis lyrata HOM05D000751 ORTHO05D005618 1.4e-198 697.2 742 54.7
Lalb_Chr02g0148081 Lupinus albus HOM05D000751 ORTHO05D005618 5.3e-198 695.3 613 58.7
C08p18130 Brassica napus HOM05D000751 ORTHO05D005618 2.6e-197 693.0 744 53.2
vmacro08789 Vaccinium macrocarpon HOM05D000751 ORTHO05D005618 7.6e-197 691.4 1050 43.5
Glyma.09G057700 Glycine max HOM05D000751 ORTHO05D005618 2.9e-196 689.5 623 58.6
ClCG06G013510 Citrullus lanatus HOM05D000751 ORTHO05D005618 4.9e-196 688.7 764 51.6
Sopen07g005110 Solanum pennellii HOM05D000751 ORTHO05D005618 4.2e-195 685.6 719 54.1
BolC8t49447H Brassica oleracea HOM05D000751 ORTHO05D005618 1.6e-194 683.7 753 52.7
Cc06_g21130 Coffea canephora HOM05D000751 ORTHO05D005618 3.5e-194 682.6 552 63.4
CARHR018290 Cardamine hirsuta HOM05D000751 ORTHO05D005618 1.0e-193 681.0 738 54.6
BraA08t35010Z Brassica rapa HOM05D000751 ORTHO05D005618 3.9e-193 679.1 741 52.4
Phvul.009G238100 Phaseolus vulgaris HOM05D000751 ORTHO05D005618 8.7e-193 677.9 619 57.5
SGA_v2.0_scaffold595G53113 Striga asiatica HOM05D000751 ORTHO05D005618 2.5e-192 676.4 612 55.6
TPR.G9024 Trifolium pratense HOM05D000751 ORTHO05D005618 7.4e-192 674.9 613 58.7
ATR0626G151 Amborella trichopoda HOM05D000751 ORTHO05D005618 3.8e-188 662.5 735 50.3
Lj6g0015551 Lotus japonicus HOM05D000751 ORTHO05D005618 7.1e-187 658.3 615 56.1
Rhsim01G0197100 Rhododendron simsii HOM05D000751 ORTHO05D005618 2.1e-186 656.8 814 50.4
FAN07G1720 Fragaria x ananassa HOM05D000751 ORTHO05D005618 3.5e-186 656.0 758 53.4
CDE06G1960 Ceratophyllum demersum HOM05D000751 ORTHO05D005618 2.0e-181 640.2 718 51.1
SalBow1G4534 Salvia bowleyana HOM05D000751 ORTHO05D005618 1.7e-180 637.1 571 55.3
Medtr2g036890 Medicago truncatula HOM05D000751 ORTHO05D005618 4.9e-180 635.6 611 54.7
Oeu047314.3 Olea europaea HOM05D000751 ORTHO05D005618 6.5e-180 635.2 728 50.0
Medtr2g012650 Medicago truncatula HOM05D000751 ORTHO05D005618 2.7e-178 629.8 615 55.0
SalBow6G0847 Salvia bowleyana HOM05D000751 ORTHO05D005618 1.0e-177 627.9 588 54.6
DCAR_007396 Daucus carota HOM05D000751 ORTHO05D005618 1.8e-177 627.1 584 59.1
arahy.Tifrunner.gnm1.ann1.QPM7FK Arachis hypogaea HOM05D000751 ORTHO05D005618 8.7e-177 624.8 611 55.3
Thhalv10023137m.g Eutrema salsugineum HOM05D000751 ORTHO05D005618 8.7e-177 624.8 682 51.9
FAN17G2112 Fragaria x ananassa HOM05D000751 ORTHO05D005618 3.7e-175 619.4 736 52.6
unitig_8.g3549 Utricularia gibba HOM05D000751 ORTHO05D005618 7.9e-170 601.7 684 48.7
FAN12G3496 Fragaria x ananassa HOM05D000751 ORTHO05D005618 3.2e-163 579.7 778 49.4
Zm00001eb406370 Zea mays HOM05D000751 ORTHO05D005618 6.1e-162 575.5 578 50.0
SalBow6G2294 Salvia bowleyana HOM05D000751 ORTHO05D005618 6.7e-161 572.0 763 46.9
Carub.0003s1065 Capsella rubella HOM05D000751 ORTHO05D005618 1.1e-158 564.7 694 47.3
Os05g0295100 Oryza sativa ssp. japonica HOM05D000751 ORTHO05D005618 1.1e-158 564.7 609 49.6
AUR62014975 Chenopodium quinoa HOM05D000751 ORTHO05D005618 3.4e-157 559.7 625 49.1
Aqoxy2G02322 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 3.2e-155 553.1 653 49.8
arahy.Tifrunner.gnm1.ann1.4Y102Q Arachis hypogaea HOM05D000751 ORTHO05D005618 1.6e-154 550.8 589 52.0
MD03G1036400 Malus domestica HOM05D000751 ORTHO05D005618 4.2e-147 526.2 583 52.7
Mapoly0074s0025 Marchantia polymorpha HOM05D000751 ORTHO05D005618 5.5e-147 525.8 684 43.3
SMO296G0020 Selaginella moellendorffii HOM05D000751 ORTHO05D005618 2.3e-145 520.4 611 46.5
CDE02G3188 Ceratophyllum demersum HOM05D000751 ORTHO05D005618 1.2e-144 518.1 379 68.1
AagrBONN_evm.TU.Sc2ySwM_369.592 Anthoceros agrestis HOM05D000751 ORTHO05D005618 2.7e-141 506.9 766 42.7
Pp3c10_17670 Physcomitrium patens HOM05D000751 ORTHO05D005618 6.8e-137 492.3 735 41.8
Cc10_g11360 Coffea canephora HOM05D000751 ORTHO05D005618 3.8e-132 476.5 706 45.2
CBR_g38171 Chara braunii HOM05D000751 ORTHO05D005618 1.4e-129 468.0 619 42.8
MD13G1251200 Malus domestica HOM05D000751 ORTHO05D005618 4.0e-129 466.5 357 66.1
SalBow6G6994 Salvia bowleyana HOM05D000751 ORTHO05D005618 1.2e-128 464.9 645 45.1
Aqoxy1G02673 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 1.5e-128 464.5 553 50.5
Glyma.15G163800 Glycine max HOM05D000751 ORTHO05D005618 1.4e-126 458.0 401 59.4
CAN.G193.38 Capsicum annuum HOM05D000751 ORTHO05D005618 9.8e-120 435.3 355 62.3
Dinv26447 Davidia involucrata HOM05D000751 ORTHO05D005618 8.6e-116 422.2 464 61.2
CAN.G266.4 Capsicum annuum HOM05D000751 ORTHO05D005618 3.6e-114 416.8 309 66.3
AUR62030665 Chenopodium quinoa HOM05D000751 ORTHO05D005618 6.6e-108 396.0 321 61.4
HPP92_028564 Vanilla planifolia HOM05D000751 ORTHO05D005618 3.5e-101 373.6 327 58.1
SEGI_35111 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 4.6e-101 373.2 252 69.4
BcaB05g23995 Brassica carinata HOM05D000751 ORTHO05D005618 6.6e-100 369.4 477 43.4
Hma1.2p1_0909F.1_g235820 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 3.5e-93 347.1 547 44.4
Cre04.g218300 Chlamydomonas reinhardtii HOM05D000751 ORTHO05D005618 3.1e-89 334.0 406 43.1
BolC2t08163H Brassica oleracea HOM05D000751 ORTHO05D005618 1.4e-86 325.1 347 49.9
SMO174G0270 Selaginella moellendorffii HOM05D000751 ORTHO05D005618 7.1e-86 322.8 468 40.6
Ca_05496_v3 Cicer arietinum L. HOM05D000751 ORTHO05D005618 2.0e-80 304.7 318 52.8
MCO16G456 Micromonas commoda HOM05D000751 ORTHO05D005618 4.5e-80 303.5 487 36.1
COL.COLO4_25458 Corchorus olitorius HOM05D000751 ORTHO05D005618 8.4e-79 299.3 520 40.0
Cfa022413 Carpinus fangiana HOM05D000751 ORTHO05D005618 1.3e-74 285.4 437 37.5
Psat4g182200 Pisum sativum HOM05D000751 ORTHO05D005618 3.2e-70 270.8 296 52.4
PRCOL_00003641 Prasinoderma coloniale HOM05D000751 ORTHO05D005618 9.3e-62 242.7 520 30.8
HPP92_003076 Vanilla planifolia HOM05D000751 ORTHO05D005618 2.2e-58 231.5 183 64.5
Solyc07g009350.4 Solanum lycopersicum HOM05D000751 ORTHO05D005618 8.2e-58 229.6 387 40.8
Medtr8g466490 Medicago truncatula HOM05D000751 ORTHO05D005618 3.8e-55 220.7 282 44.7
Nn2g10858 Nelumbo nucifera HOM05D000751 ORTHO05D005618 8.5e-55 219.5 139 73.4
Cc06_g21120 Coffea canephora HOM05D000751 ORTHO05D005618 1.9e-54 218.4 132 81.8
AUR62024882 Chenopodium quinoa HOM05D000751 ORTHO05D005618 1.5e-51 208.8 273 40.7
SEGI_01043 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 1.9e-51 208.4 195 55.4
BcaC03g14585 Brassica carinata HOM05D000751 ORTHO05D005618 6.3e-50 203.4 273 45.1
Haze_19748 Corylus avellana HOM05D000751 ORTHO05D005618 3.1e-49 201.1 326 41.4
SEGI_01124 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 4.5e-48 197.2 123 76.4
HPP92_028565 Vanilla planifolia HOM05D000751 ORTHO05D005618 5.0e-47 193.7 115 79.1
Psat4g047120 Pisum sativum HOM05D000751 ORTHO05D005618 5.5e-46 190.3 197 54.3
Medtr4g415340 Medicago truncatula HOM05D000751 ORTHO05D005618 7.9e-45 186.4 262 45.0
CAN.G266.3 Capsicum annuum HOM05D000751 ORTHO05D005618 3.0e-44 184.5 272 43.8
arahy.Tifrunner.gnm1.ann1.EK4LKE Arachis hypogaea HOM05D000751 ORTHO05D005618 5.7e-43 180.3 124 71.8
Medtr8g466500 Medicago truncatula HOM05D000751 ORTHO05D005618 5.0e-39 167.2 334 36.8
MD13G1251100 Malus domestica HOM05D000751 ORTHO05D005618 1.4e-36 159.1 353 38.2
Sabra15G0073700 Salix brachista HOM05D000810 ORTHO05D005618 1.5e-35 155.6 267 38.6
Hma1.2p1_2432F.1_g322050 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 2.0e-27 128.6 270 38.5
COL.COLO4_25459 Corchorus olitorius HOM05D000751 ORTHO05D005618 2.6e-27 128.3 77 80.5
DCAR_001330 Daucus carota HOM05D000751 ORTHO05D005618 2.6e-27 128.3 87 74.7
Sc06g0007910 Simmondsia chinensis HOM05D000751 ORTHO05D005618 9.7e-27 126.3 296 34.8
Aqoxy125s004 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 3.8e-23 114.4 102 61.8
Aqoxy2G02180 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 3.8e-23 114.4 132 49.2
Hma1.2p1_2432F.1_g322060 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 7.2e-22 110.2 85 65.9
Aqoxy3G01439 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 2.7e-21 108.2 68 77.9
Nn2g10857 Nelumbo nucifera HOM05D000751 ORTHO05D005618 8.0e-21 106.7 60 85.0
Hma1.2p1_2432F.1_g322070 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 1.5e-19 102.4 96 59.4
SEGI_01614 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 2.6e-19 101.7 68 64.7
Psat4g182280 Pisum sativum HOM05D000751 ORTHO05D005618 8.3e-18 96.7 60 75.0
HPP92_003077 Vanilla planifolia HOM05D000751 ORTHO05D005618 6.5e-15 87.0 79 58.2
CAN.G101.3 Capsicum annuum HOM05D000751 ORTHO05D005618 4.0e-12 77.8 81 55.6
Sopen07g005100 Solanum pennellii HOM05D000002 ORTHO05D000001 8.3e-10 70.1 46 78.3
Gorai.003G081200 Gossypium raimondii HOM05D000751 ORTHO05D005618 1.4e-09 69.3 46 71.7
Rhsim03G0091700 Rhododendron simsii HOM05D000751 ORTHO05D340051 2.9e-07 61.6 104 36.5


User provided reference genes

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