Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_007396 Daucus carota HOM05D000751 ORTHO05D005618 0.0e+00 1178.3 597 100.0
DCAR_007397 Daucus carota HOM05D000751 ORTHO05D005618 2.8e-178 629.4 584 59.1
CSS0048015 Camellia sinensis var. sinensis HOM05D000751 ORTHO05D005618 1.3e-175 620.5 574 60.1
GSVIVG01010908001 Vitis vinifera HOM05D000751 ORTHO05D005618 2.3e-172 609.8 596 55.2
Actinidia06357 Actinidia chinensis HOM05D000751 ORTHO05D005618 3.9e-172 609.0 596 56.9
TAR636G3589 Trochodendron aralioides HOM05D000751 ORTHO05D005618 2.5e-171 606.3 556 58.6
Hma1.2p1_0207F.1_g087810 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 1.7e-170 603.6 609 55.7
Nitab4.5_0000074g0030 Nicotiana tabacum HOM05D000751 ORTHO05D005618 2.0e-168 596.7 587 55.0
Lsat_1_v5_gn_7_56501 Lactuca sativa HOM05D000751 ORTHO05D005618 5.9e-168 595.1 586 54.3
Sopen07g005110 Solanum pennellii HOM05D000751 ORTHO05D005618 7.7e-168 594.7 576 55.6
Peaxi162Scf00324g00731 Petunia axillaris HOM05D000751 ORTHO05D005618 5.0e-167 592.0 587 55.5
Ciclev10030781m.g Citrus clementina HOM05D000751 ORTHO05D005618 3.0e-164 582.8 592 53.0
Cc06_g22130 Coffea canephora HOM05D000751 ORTHO05D005618 3.9e-164 582.4 520 58.5
Cc06_g21130 Coffea canephora HOM05D000751 ORTHO05D005618 1.1e-163 580.9 543 57.1
Cpa.g.sc86.27 Carica papaya HOM05D000751 ORTHO05D005618 4.4e-163 578.9 664 48.9
MELO3C017440.2 Cucumis melo HOM05D000751 ORTHO05D005618 4.4e-163 578.9 523 58.3
Nn8g40996 Nelumbo nucifera HOM05D000751 ORTHO05D005618 8.2e-162 574.7 539 56.4
CsaV3_1G031770 Cucumis sativus L. HOM05D000751 ORTHO05D005618 1.1e-161 574.3 523 57.9
Eucgr.A01411 Eucalyptus grandis HOM05D000751 ORTHO05D005618 1.4e-161 573.9 580 53.1
ECA240G3678 Erigeron canadensis HOM05D000751 ORTHO05D005618 1.2e-160 570.9 527 55.6
Aqoxy2G02196 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 5.9e-160 568.5 534 55.2
CANSAT11G2085 Cannabis sativa HOM05D000751 ORTHO05D005618 5.9e-160 568.5 536 55.8
Migut.L01901 Erythranthe guttata HOM05D000751 ORTHO05D005618 5.9e-160 568.5 589 52.5
MBI16_g18209_MAGBIO Magnolia biondii HOM05D000751 ORTHO05D000889 2.9e-159 566.2 601 52.9
Sed0012322 Sechium edule HOM05D000751 ORTHO05D005618 7.2e-158 561.6 575 53.7
Hund24686 Selenicereus undatus HOM05D000751 ORTHO05D005618 2.1e-157 560.1 572 52.3
TWI38G2172 Tripterygium wilfordii HOM05D000751 ORTHO05D005618 1.8e-156 557.0 533 55.7
Gorai.009G003500 Gossypium raimondii HOM05D000751 ORTHO05D005618 3.9e-156 555.8 522 54.8
SalBow1G4534 Salvia bowleyana HOM05D000751 ORTHO05D005618 3.9e-156 555.8 569 52.5
Nitab4.5_0008918g0010 Nicotiana tabacum HOM05D000751 ORTHO05D005618 5.2e-156 555.4 639 50.2
CiPaw.14G110300 Carya illinoinensis HOM05D000751 ORTHO05D005618 6.7e-156 555.1 589 52.5
VMungo1309G0231 Vigna mungo HOM05D000751 ORTHO05D005618 2.6e-155 553.1 590 50.5
Potri.003G010000 Populus trichocarpa HOM05D000751 ORTHO05D005618 3.3e-155 552.7 593 50.6
Gohir.A05G003500 Gossypium hirsutum HOM05D000751 ORTHO05D005618 5.7e-155 552.0 522 54.4
MSTRG.26530 Avicennia marina HOM05D000751 ORTHO05D005618 7.4e-155 551.6 650 49.4
EL10Ac2g02594 Beta vulgaris HOM05D000751 ORTHO05D005618 1.7e-154 550.4 617 49.9
Gohir.D05G003900 Gossypium hirsutum HOM05D000751 ORTHO05D005618 1.7e-154 550.4 522 54.8
PSO017G1776 Papaver somniferum HOM05D000751 ORTHO05D005618 2.8e-154 549.7 531 53.9
Cfa016755 Carpinus fangiana HOM05D000751 ORTHO05D005618 3.7e-154 549.3 585 52.6
EL10As14g24084 Beta vulgaris HOM05D000751 ORTHO05D005618 4.8e-154 548.9 617 49.8
Prupe.1G079600 Prunus persica HOM05D000751 ORTHO05D005618 4.8e-154 548.9 550 53.8
SalBow6G0847 Salvia bowleyana HOM05D000751 ORTHO05D005618 4.8e-154 548.9 569 52.2
THA.LOC104813512 Tarenaya hassleriana HOM05D000751 ORTHO05D005618 6.3e-154 548.5 526 53.8
Manes.17G002500 Manihot esculenta HOM05D000751 ORTHO05D005618 1.1e-153 547.7 593 49.7
Sc06g0007900 Simmondsia chinensis HOM05D000751 ORTHO05D005618 1.8e-153 547.0 550 52.9
PSO478G0715 Papaver somniferum HOM05D000751 ORTHO05D005618 4.1e-153 545.8 546 52.7
Phvul.009G238100 Phaseolus vulgaris HOM05D000751 ORTHO05D005618 1.2e-152 544.3 569 51.1
Glyma.09G057700 Glycine max HOM05D000751 ORTHO05D005618 1.6e-152 543.9 591 49.7
Lalb_Chr02g0148081 Lupinus albus HOM05D000751 ORTHO05D005618 1.7e-151 540.4 542 53.1
Duzib168G1036 Durio zibethinus HOM05D000751 ORTHO05D005618 2.2e-151 540.0 586 50.2
RcHm_v2.0_Chr4g0400251 Rosa chinensis HOM05D000751 ORTHO05D005618 2.2e-151 540.0 530 54.0
CARHR018290 Cardamine hirsuta HOM05D000751 ORTHO05D005618 8.5e-151 538.1 530 53.4
Sp4g05240 Schrenkiella parvula HOM05D000751 ORTHO05D005618 4.2e-150 535.8 543 52.7
Lj6g0015551 Lotus japonicus HOM05D000751 ORTHO05D005618 1.6e-149 533.9 521 53.0
Carub.0001s1742 Capsella rubella HOM05D000751 ORTHO05D005618 6.1e-149 531.9 527 54.1
SGA_v2.0_scaffold595G53113 Striga asiatica HOM05D000751 ORTHO05D005618 6.1e-149 531.9 582 50.2
TPR.G9024 Trifolium pratense HOM05D000751 ORTHO05D005618 6.1e-149 531.9 575 50.8
Thecc.09G180200 Theobroma cacao HOM05D000751 ORTHO05D005618 8.0e-149 531.6 585 49.6
AL1G30040 Arabidopsis lyrata HOM05D000751 ORTHO05D005618 1.4e-148 530.8 527 52.8
Atru.chr11.2504 Acer truncatum HOM05D000751 ORTHO05D005618 5.2e-148 528.9 572 51.2
FvH4_4g07640 Fragaria vesca HOM05D000751 ORTHO05D005618 5.2e-148 528.9 524 52.5
Thhalv10006892m.g Eutrema salsugineum HOM05D000751 ORTHO05D005618 6.7e-148 528.5 590 48.8
AT1G17690 Arabidopsis thaliana HOM05D000751 ORTHO05D005618 1.5e-147 527.3 586 49.8
Aa31LG7G2520 Aethionema arabicum HOM05D000751 ORTHO05D005618 2.6e-147 526.6 526 53.0
ATR0626G151 Amborella trichopoda HOM05D000751 ORTHO05D005618 9.7e-147 524.6 573 50.1
BraA08t35010Z Brassica rapa HOM05D000751 ORTHO05D005618 1.3e-146 524.2 525 52.4
A08p30790 Brassica napus HOM05D000751 ORTHO05D005618 2.4e-145 520.0 581 48.7
unitig_8.g3549 Utricularia gibba HOM05D000751 ORTHO05D005618 4.1e-145 519.2 565 50.3
HanXRQChr03g0068331 Helianthus annuus HOM05D000751 ORTHO05D005618 5.3e-145 518.8 519 53.9
C08p18130 Brassica napus HOM05D000751 ORTHO05D005618 7.0e-145 518.5 573 48.9
BolC8t49447H Brassica oleracea HOM05D000751 ORTHO05D005618 2.2e-143 513.5 582 48.5
ClCG06G013510 Citrullus lanatus HOM05D000751 ORTHO05D005618 9.4e-142 508.1 715 44.2
CDE06G1960 Ceratophyllum demersum HOM05D000751 ORTHO05D005618 3.4e-139 499.6 462 54.5
Medtr2g012650 Medicago truncatula HOM05D000751 ORTHO05D005618 8.3e-138 495.0 578 48.3
arahy.Tifrunner.gnm1.ann1.QPM7FK Arachis hypogaea HOM05D000751 ORTHO05D005618 1.6e-136 490.7 520 51.5
Rhsim01G0197100 Rhododendron simsii HOM05D000751 ORTHO05D005618 1.6e-136 490.7 598 47.8
Thhalv10023137m.g Eutrema salsugineum HOM05D000751 ORTHO05D005618 3.5e-136 489.6 532 49.1
FAN07G1720 Fragaria x ananassa HOM05D000751 ORTHO05D005618 1.9e-134 483.8 572 47.2
AUR62014975 Chenopodium quinoa HOM05D000751 ORTHO05D005618 3.3e-134 483.0 582 47.6
Medtr2g036890 Medicago truncatula HOM05D000751 ORTHO05D005618 4.2e-134 482.6 586 47.1
vmacro08789 Vaccinium macrocarpon HOM05D000751 ORTHO05D005618 1.4e-132 477.6 883 37.6
Oeu047314.3 Olea europaea HOM05D000751 ORTHO05D005618 5.7e-131 472.2 564 47.5
FAN17G2112 Fragaria x ananassa HOM05D000751 ORTHO05D005618 1.7e-127 460.7 549 47.2
Zm00001eb406370 Zea mays HOM05D000751 ORTHO05D005618 5.6e-126 455.7 569 44.3
Os05g0295100 Oryza sativa ssp. japonica HOM05D000751 ORTHO05D005618 6.4e-122 442.2 575 43.8
SalBow6G2294 Salvia bowleyana HOM05D000751 ORTHO05D005618 1.4e-121 441.0 543 47.0
Glyma.15G163800 Glycine max HOM05D000751 ORTHO05D005618 1.2e-120 438.0 401 56.4
MD03G1036400 Malus domestica HOM05D000751 ORTHO05D005618 1.2e-120 438.0 435 54.3
FAN12G3496 Fragaria x ananassa HOM05D000751 ORTHO05D005618 6.6e-119 432.2 523 45.1
Carub.0003s1065 Capsella rubella HOM05D000751 ORTHO05D005618 7.3e-118 428.7 525 46.1
arahy.Tifrunner.gnm1.ann1.4Y102Q Arachis hypogaea HOM05D000751 ORTHO05D005618 2.1e-117 427.2 522 46.4
AagrBONN_evm.TU.Sc2ySwM_369.592 Anthoceros agrestis HOM05D000751 ORTHO05D005618 4.4e-115 419.5 519 44.1
SMO296G0020 Selaginella moellendorffii HOM05D000751 ORTHO05D005618 1.3e-114 417.9 521 42.2
Mapoly0074s0025 Marchantia polymorpha HOM05D000751 ORTHO05D005618 2.9e-114 416.8 528 42.4
SalBow6G6994 Salvia bowleyana HOM05D000751 ORTHO05D005618 4.6e-112 409.5 538 45.2
Pp3c10_17670 Physcomitrium patens HOM05D000751 ORTHO05D005618 1.7e-111 407.5 533 41.7
CAN.G193.38 Capsicum annuum HOM05D000751 ORTHO05D005618 2.3e-111 407.1 356 58.4
Aqoxy2G02322 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 2.0e-107 394.0 521 44.9
CDE02G3188 Ceratophyllum demersum HOM05D000751 ORTHO05D005618 1.7e-106 391.0 344 57.0
AUR62030665 Chenopodium quinoa HOM05D000751 ORTHO05D005618 8.6e-103 378.6 327 58.4
Cc10_g11360 Coffea canephora HOM05D000751 ORTHO05D005618 4.3e-102 376.3 299 62.9
Aqoxy1G02673 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 9.5e-102 375.2 373 53.9
CAN.G266.4 Capsicum annuum HOM05D000751 ORTHO05D005618 6.4e-98 362.5 309 58.9
MD13G1251200 Malus domestica HOM05D000751 ORTHO05D005618 1.7e-95 354.4 314 57.0
HPP92_028564 Vanilla planifolia HOM05D000751 ORTHO05D005618 1.6e-93 347.8 337 53.1
CBR_g38171 Chara braunii HOM05D000751 ORTHO05D005618 3.8e-90 336.7 590 35.6
BolC2t08163H Brassica oleracea HOM05D000751 ORTHO05D005618 3.0e-87 327.0 357 50.7
BcaB05g23995 Brassica carinata HOM05D000751 ORTHO05D005618 5.6e-86 322.8 537 39.3
SMO174G0270 Selaginella moellendorffii HOM05D000751 ORTHO05D005618 3.3e-78 297.0 363 44.6
Hma1.2p1_0909F.1_g235820 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 7.4e-78 295.8 446 45.1
Dinv26447 Davidia involucrata HOM05D000751 ORTHO05D005618 2.4e-76 290.8 334 53.6
SEGI_35111 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 7.4e-70 269.2 230 54.8
Psat4g182200 Pisum sativum HOM05D000751 ORTHO05D005618 1.3e-69 268.5 275 54.5
Cre04.g218300 Chlamydomonas reinhardtii HOM05D000751 ORTHO05D005618 3.7e-69 266.9 352 40.1
MCO16G456 Micromonas commoda HOM05D000751 ORTHO05D005618 1.1e-65 255.4 454 33.9
Ca_05496_v3 Cicer arietinum L. HOM05D000751 ORTHO05D005618 1.2e-59 235.3 333 45.0
Cfa022413 Carpinus fangiana HOM05D000751 ORTHO05D005618 3.9e-55 220.3 429 31.9
Nn2g10858 Nelumbo nucifera HOM05D000751 ORTHO05D005618 1.5e-51 208.4 154 65.6
COL.COLO4_25458 Corchorus olitorius HOM05D000751 ORTHO05D005618 2.0e-51 208.0 393 37.4
Solyc07g009350.4 Solanum lycopersicum HOM05D000751 ORTHO05D005618 7.7e-51 206.1 240 49.6
Psat4g047120 Pisum sativum HOM05D000751 ORTHO05D005618 1.5e-46 191.8 200 53.0
BcaC03g14585 Brassica carinata HOM05D000751 ORTHO05D005618 2.4e-44 184.5 287 42.2
PRCOL_00003641 Prasinoderma coloniale HOM05D000751 ORTHO05D005618 1.2e-43 182.2 485 27.8
AUR62024882 Chenopodium quinoa HOM05D000751 ORTHO05D005618 3.2e-41 174.1 198 47.5
SEGI_01043 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 9.4e-41 172.6 203 48.8
CAN.G266.3 Capsicum annuum HOM05D000751 ORTHO05D005618 8.0e-40 169.5 271 43.2
Medtr8g466500 Medicago truncatula HOM05D000751 ORTHO05D005618 1.7e-37 161.8 303 37.3
Medtr4g415340 Medicago truncatula HOM05D000751 ORTHO05D005618 4.2e-33 147.1 170 47.6
Medtr8g466490 Medicago truncatula HOM05D000751 ORTHO05D005618 5.2e-31 140.2 259 35.5
Haze_19748 Corylus avellana HOM05D000751 ORTHO05D005618 8.8e-31 139.4 288 36.8
HPP92_003076 Vanilla planifolia HOM05D000751 ORTHO05D005618 7.2e-25 119.8 149 41.6
Sabra15G0073700 Salix brachista HOM05D000810 ORTHO05D005618 2.1e-24 118.2 288 30.9
SEGI_01614 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 2.7e-24 117.9 100 54.0
MD13G1251100 Malus domestica HOM05D000751 ORTHO05D005618 5.7e-22 110.2 201 37.8
Cc06_g21120 Coffea canephora HOM05D000751 ORTHO05D005618 3.1e-20 104.4 90 56.7
Hma1.2p1_2432F.1_g322060 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 1.0e-18 99.4 85 60.0
arahy.Tifrunner.gnm1.ann1.EK4LKE Arachis hypogaea HOM05D000751 ORTHO05D005618 6.6e-18 96.7 140 40.7
SEGI_01124 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 8.6e-18 96.3 81 53.1
Aqoxy2G02180 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 8.0e-16 89.7 140 41.4
Aqoxy125s004 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 2.3e-15 88.2 93 50.5
HPP92_028565 Vanilla planifolia HOM05D000751 ORTHO05D005618 4.0e-15 87.4 72 54.2
Hma1.2p1_2432F.1_g322070 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 3.7e-13 80.9 91 50.5
Hma1.2p1_2432F.1_g322050 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 6.3e-13 80.1 134 40.3
HPP92_003077 Vanilla planifolia HOM05D000751 ORTHO05D005618 7.8e-11 73.2 79 46.8
Sc06g0007910 Simmondsia chinensis HOM05D000751 ORTHO05D005618 2.3e-10 71.6 99 44.4


User provided reference genes

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