Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_007349 Daucus carota HOM05D006841 ORTHO05D008607 5.5e-198 694.1 353 100.0
Potri.009G075200 Populus trichocarpa HOM05D006841 ORTHO05D008607 2.3e-156 555.8 353 75.4
Prupe.6G052600 Prunus persica HOM05D006841 ORTHO05D008607 8.9e-156 553.9 354 77.1
Thecc.09G353800 Theobroma cacao HOM05D006841 ORTHO05D008607 7.5e-155 550.8 353 75.6
CSS0014141 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 2.9e-154 548.9 353 74.8
CSS0042618 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 2.9e-154 548.9 353 74.8
COL.COLO4_11072 Corchorus olitorius HOM05D006841 ORTHO05D008607 6.4e-154 547.7 353 74.2
QL01p039597 Quercus lobata HOM05D006841 ORTHO05D008607 7.0e-153 544.3 357 75.9
Ciclev10028251m.g Citrus clementina HOM05D006841 ORTHO05D008607 9.2e-153 543.9 353 75.9
Sabra09G0057100 Salix brachista HOM05D006841 ORTHO05D008607 9.2e-153 543.9 353 74.5
Phvul.006G071400 Phaseolus vulgaris HOM05D006841 ORTHO05D008607 2.0e-152 542.7 353 73.7
Duzib170G1072 Durio zibethinus HOM05D006841 ORTHO05D008607 3.5e-152 542.0 353 73.1
Glyma.18G059800 Glycine max HOM05D006841 ORTHO05D008607 5.9e-152 541.2 353 72.8
Atru.chr3.4145 Acer truncatum HOM05D006841 ORTHO05D008607 3.9e-151 538.5 353 75.1
Dinv28672 Davidia involucrata HOM05D006841 ORTHO05D008607 6.6e-151 537.7 339 78.2
MD03G1062600 Malus domestica HOM05D006841 ORTHO05D008607 1.9e-150 536.2 354 74.9
TAR369G0096 Trochodendron aralioides HOM05D006841 ORTHO05D008607 1.9e-150 536.2 353 74.5
Eucgr.B02230 Eucalyptus grandis HOM05D006841 ORTHO05D008607 7.3e-150 534.3 353 74.5
Glyma.11G167300 Glycine max HOM05D006841 ORTHO05D008607 7.3e-150 534.3 354 72.6
Manes.02G217600 Manihot esculenta HOM05D006841 ORTHO05D008607 1.6e-149 533.1 353 74.8
RcHm_v2.0_Chr5g0070721 Rosa chinensis HOM05D006841 ORTHO05D008607 1.6e-149 533.1 354 73.7
Actinidia34467 Actinidia chinensis HOM05D006841 ORTHO05D008607 2.1e-149 532.7 353 73.7
Duzib168G0722 Durio zibethinus HOM05D006841 ORTHO05D008607 2.1e-149 532.7 353 72.5
Solyc05g012140.3 Solanum lycopersicum HOM05D006841 ORTHO05D008607 2.8e-149 532.3 353 72.8
Sopen05g006930 Solanum pennellii HOM05D006841 ORTHO05D008607 2.8e-149 532.3 353 72.8
arahy.Tifrunner.gnm1.ann1.1QT3IR Arachis hypogaea HOM05D006841 ORTHO05D008607 3.6e-149 531.9 354 72.6
Haze_24381 Corylus avellana HOM05D006841 ORTHO05D008607 4.7e-149 531.6 384 70.8
MD11G1066200 Malus domestica HOM05D006841 ORTHO05D008607 4.7e-149 531.6 354 73.4
arahy.Tifrunner.gnm1.ann1.UR06JS Arachis hypogaea HOM05D006841 ORTHO05D008607 6.2e-149 531.2 354 72.6
TAR636G1839 Trochodendron aralioides HOM05D006841 ORTHO05D008607 6.2e-149 531.2 353 73.1
FvH4_3g39290 Fragaria vesca HOM05D006841 ORTHO05D008607 1.0e-148 530.4 354 73.2
CiPaw.14G056400 Carya illinoinensis HOM05D006841 ORTHO05D008607 1.8e-148 529.6 357 73.4
FAN11G0941 Fragaria x ananassa HOM05D006841 ORTHO05D008607 2.3e-148 529.3 354 72.9
FAN25G3694 Fragaria x ananassa HOM05D006841 ORTHO05D008607 2.3e-148 529.3 354 73.2
Lj6g0024894 Lotus japonicus HOM05D006841 ORTHO05D008607 2.3e-148 529.3 353 72.0
Cc01_g14600 Coffea canephora HOM05D006841 ORTHO05D008607 3.1e-148 528.9 345 75.4
CiPaw.13G073200 Carya illinoinensis HOM05D006841 ORTHO05D008607 4.0e-148 528.5 360 73.9
Gohir.A05G108000 Gossypium hirsutum HOM05D006841 ORTHO05D008607 4.0e-148 528.5 353 71.4
Gorai.009G112400 Gossypium raimondii HOM05D006841 ORTHO05D008607 1.5e-147 526.6 353 71.4
Psat5g157440 Pisum sativum HOM05D006841 ORTHO05D008607 1.5e-147 526.6 354 70.1
PGR102G0989 Punica granatum HOM05D006841 ORTHO05D008607 1.5e-147 526.6 354 71.2
Medtr3g465390 Medicago truncatula HOM05D006841 ORTHO05D008607 2.0e-147 526.2 354 70.9
HanXRQChr01g0011601 Helianthus annuus HOM05D006841 ORTHO05D008607 2.6e-147 525.8 353 71.7
PGSC0003DMG401028313 Solanum tuberosum HOM05D006841 ORTHO05D008607 3.4e-147 525.4 353 72.2
Gohir.D05G108200 Gossypium hirsutum HOM05D006841 ORTHO05D008607 4.4e-147 525.0 353 71.4
FAN21G2904 Fragaria x ananassa HOM05D006841 ORTHO05D008607 5.8e-147 524.6 354 72.6
CANSAT54G0320 Cannabis sativa HOM05D006841 ORTHO05D008607 7.5e-147 524.2 353 72.0
SalBow2G2391 Salvia bowleyana HOM05D006841 ORTHO05D008607 7.5e-147 524.2 353 72.0
TPR.G32925 Trifolium pratense HOM05D006841 ORTHO05D008607 1.7e-146 523.1 354 70.9
Peaxi162Scf01324g00238 Petunia axillaris HOM05D006841 ORTHO05D008607 6.4e-146 521.2 354 72.3
Lalb_Chr18g0051231 Lupinus albus HOM05D006841 ORTHO05D008607 1.3e-143 513.5 354 70.1
CAN.G707.10 Capsicum annuum HOM05D006841 ORTHO05D008607 1.7e-143 513.1 354 70.3
MSTRG.12683 Avicennia marina HOM05D006841 ORTHO05D008607 2.3e-143 512.7 354 71.5
GSVIVG01024686001 Vitis vinifera HOM05D006841 ORTHO05D008607 1.1e-142 510.4 329 76.9
vmacro14612 Vaccinium macrocarpon HOM05D006841 ORTHO05D008607 7.3e-142 507.7 354 69.8
TWI79G1747 Tripterygium wilfordii HOM05D006841 ORTHO05D008607 9.5e-142 507.3 353 70.0
Oeu018490.1 Olea europaea HOM05D006841 ORTHO05D008607 1.6e-141 506.5 353 70.3
ECA248G2088 Erigeron canadensis HOM05D006841 ORTHO05D008607 3.6e-141 505.4 330 75.2
Aqoxy1G01268 Aquilegia oxysepala HOM05D006841 ORTHO05D008607 8.1e-141 504.2 357 70.9
Sc06g0008150 Simmondsia chinensis HOM05D006841 ORTHO05D008607 6.8e-140 501.1 354 68.1
CsaV3_6G016010 Cucumis sativus L. HOM05D006841 ORTHO05D008607 8.9e-140 500.7 353 67.4
ClCG02G019390 Citrullus lanatus HOM05D006841 ORTHO05D008607 1.2e-139 500.4 353 66.9
Migut.N00773 Erythranthe guttata HOM05D006841 ORTHO05D008607 1.5e-139 500.0 353 69.1
Rhsim01G0239400 Rhododendron simsii HOM05D006841 ORTHO05D008607 2.6e-139 499.2 355 69.0
VMungo0540G0160 Vigna mungo HOM05D006841 ORTHO05D008607 7.5e-139 497.7 329 72.9
Sed0019546 Sechium edule HOM05D006841 ORTHO05D008607 2.2e-138 496.1 353 67.1
MELO3C026835.2 Cucumis melo HOM05D006841 ORTHO05D008607 4.9e-138 495.0 353 66.9
Lsat_1_v5_gn_5_173260 Lactuca sativa HOM05D006841 ORTHO05D008607 1.1e-137 493.8 329 73.6
Lj2A1088G41 Lonicera japonica HOM05D006841 ORTHO05D008607 4.3e-134 481.9 309 77.0
AUR62009700 Chenopodium quinoa HOM05D006841 ORTHO05D008607 1.8e-132 476.5 354 65.5
unitig_94.g28363 Utricularia gibba HOM05D006841 ORTHO05D008607 2.3e-132 476.1 353 65.2
EL10Ac7g15887 Beta vulgaris HOM05D006841 ORTHO05D008607 3.1e-132 475.7 354 65.0
AUR62036246 Chenopodium quinoa HOM05D006841 ORTHO05D008607 3.1e-132 475.7 354 65.5
Ah.15g096690 Amaranthus hybridus HOM05D006841 ORTHO05D008607 4.4e-131 471.9 354 65.0
Hund05042 Selenicereus undatus HOM05D006841 ORTHO05D008607 4.4e-131 471.9 354 64.1
Ah.08g215320 Amaranthus hybridus HOM05D006841 ORTHO05D008607 1.1e-129 467.2 354 63.8
PSO017G2874 Papaver somniferum HOM05D006841 ORTHO05D008607 4.1e-129 465.3 354 65.3
MBI15_g21765_MAGBIO Magnolia biondii HOM05D006841 ORTHO05D008607 5.4e-129 464.9 353 64.0
Ca_14982_v3 Cicer arietinum L. HOM05D006841 ORTHO05D008607 1.2e-128 463.8 324 70.1
PSO349G0316 Papaver somniferum HOM05D006841 ORTHO05D008607 3.0e-127 459.1 355 64.5
THA.LOC104800754 Tarenaya hassleriana HOM05D006841 ORTHO05D008607 8.9e-124 447.6 359 61.8
Aa31LG5G6580 Aethionema arabicum HOM05D006841 ORTHO05D008607 4.4e-123 445.3 360 60.8
CARHR123400 Cardamine hirsuta HOM05D006841 ORTHO05D008607 1.3e-122 443.7 357 60.5
C04p58980 Brassica napus HOM05D006841 ORTHO05D008607 4.9e-122 441.8 360 58.9
CDE06G2104 Ceratophyllum demersum HOM05D006841 ORTHO05D008607 6.4e-122 441.4 353 59.8
AL4G24870 Arabidopsis lyrata HOM05D006841 ORTHO05D008607 1.1e-121 440.7 359 59.6
A04p22780 Brassica napus HOM05D006841 ORTHO05D008607 2.4e-121 439.5 360 58.9
BolC4t27410H Brassica oleracea HOM05D006841 ORTHO05D008607 2.4e-121 439.5 360 58.9
BraA04t17817Z Brassica rapa HOM05D006841 ORTHO05D008607 2.4e-121 439.5 360 58.9
Carub.0004s1120 Capsella rubella HOM05D006841 ORTHO05D008607 2.4e-121 439.5 358 60.3
BcaC02g08056 Brassica carinata HOM05D006841 ORTHO05D008607 3.2e-121 439.1 355 59.2
Thhalv10016546m.g Eutrema salsugineum HOM05D006841 ORTHO05D008607 4.2e-121 438.7 357 60.5
AT2G30100 Arabidopsis thaliana HOM05D006841 ORTHO05D008607 5.4e-121 438.3 360 59.2
Sp4g12660 Schrenkiella parvula HOM05D006841 ORTHO05D008607 1.6e-120 436.8 357 60.2
SGA_v2.0_scaffold104G30129 Striga asiatica HOM05D006841 ORTHO05D008607 4.8e-117 425.2 355 59.2
Zm00001eb286480 Zea mays HOM05D006841 ORTHO05D008607 4.8e-117 425.2 360 56.9
Os05g0353300 Oryza sativa ssp. japonica HOM05D006841 ORTHO05D008607 1.3e-114 417.2 361 55.1
Hma1.2p1_0146F.1_g065520 Hydrangea macrophylla HOM05D006841 ORTHO05D008607 6.9e-108 394.8 256 75.0
ATR0174G035 Amborella trichopoda HOM05D006841 ORTHO05D008607 5.3e-100 368.6 353 51.8
CSS0012316 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 3.4e-83 312.8 353 49.9
AL59U10050 Arabidopsis lyrata HOM05D006841 ORTHO05D008607 2.0e-78 297.0 298 52.3
SEGI_38470 Sequoiadendron giganteum HOM05D006841 ORTHO05D008607 4.8e-77 292.4 352 40.9
Actinidia23875 Actinidia chinensis HOM05D006841 ORTHO05D008607 2.5e-73 280.0 185 73.5
HPP92_025104 Vanilla planifolia HOM05D006841 ORTHO05D008607 4.4e-70 269.2 266 51.9
Mapoly0068s0098 Marchantia polymorpha HOM05D006841 ORTHO05D008607 1.7e-61 240.7 352 37.8
Oeu034210.1 Olea europaea HOM05D009051 ORTHO05D000140 9.8e-46 188.3 171 57.9
Pp3c12_8330 Physcomitrium patens HOM05D006841 ORTHO05D008607 2.3e-39 167.2 352 31.8
SMO304G0125 Selaginella moellendorffii HOM05D006841 ORTHO05D008607 2.3e-39 167.2 353 30.9
Nn2g10947 Nelumbo nucifera HOM05D006841 ORTHO05D008607 1.6e-35 154.5 100 72.0
Cpa.g.sc2.394 Carica papaya HOM05D006841 ORTHO05D008607 4.6e-35 152.9 95 75.8
Oeu034513.1 Olea europaea HOM05D006841 ORTHO05D008607 2.3e-34 150.6 228 42.1
Oeu034517.1 Olea europaea HOM05D006841 ORTHO05D008607 1.5e-33 147.9 228 42.5
Nn2g13216 Nelumbo nucifera HOM05D006841 ORTHO05D008607 4.3e-33 146.4 95 72.6
VMungo0331G0799 Vigna mungo HOM05D000172 ORTHO05D004529 4.6e-27 126.3 135 48.1
MD11G1194000 Malus domestica HOM05D006841 ORTHO05D008607 2.9e-21 107.1 84 65.5
Oeu034514.1 Olea europaea HOM05D006841 ORTHO05D008607 1.9e-17 94.4 85 51.8
Oeu034518.1 Olea europaea HOM05D006841 ORTHO05D008607 2.5e-17 94.0 85 51.8
Oeu019495.1 Olea europaea HOM05D006841 ORTHO05D008607 3.3e-17 93.6 143 41.3
AagrBONN_evm.TU.Sc2ySwM_117.787 Anthoceros agrestis HOM05D006841 ORTHO05D008607 2.0e-06 57.8 156 28.2


User provided reference genes

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